Lab 6: Saliva Practical Beer-Lambert Law University of Lincoln presentation This work is licensed under a Creative Commons Attribution-Noncommercial-Share Alike 2.0 UK: England & Wales License This session…. • Overview of the practical… • Statistical analysis…. • Take a look at an example control chart… This work is licensed under a Creative Commons Attribution-Noncommercial-Share Alike 2.0 UK: England & Wales License The Practical • Determine the thiocyanate (SCN-) in a sample of your saliva using a colourimetric method of analysis • Calibration curve to determine the [SCN-] of the unknowns • This was ALL completed in the practical class • Some of your absorbance values may have been higher than the absorbance values of your top standards… is this a problem???? This work is licensed under a Creative Commons Attribution-Noncommercial-Share Alike 2.0 UK: England & Wales License Types of data QUALITATIVE Non numerical i.e what is present? QUANTITATIVE Numerical: i.e. How much is present? This work is licensed under a Creative Commons Attribution-Noncommercial-Share Alike 2.0 UK: England & Wales License Beer-Lambert Law Beers Law states that absorbance is proportional to concentration over a certain concentration range A = cl A = absorbance = molar extinction coefficient (M-1 cm-1 or mol-1 L cm-1) c = concentration (M or mol L-1) l = path length (cm) (width of cuvette) This work is licensed under a Creative Commons Attribution-Noncommercial-Share Alike 2.0 UK: England & Wales License Beer-Lambert Law • Beer’s law is valid at low concentrations, but breaks down at higher concentrations • For linearity, A < 1 1 This work is licensed under a Creative Commons Attribution-Noncommercial-Share Alike 2.0 UK: England & Wales License Beer-Lambert Law • If your unknown has a higher concentration than your highest standard, you have to ASSUME that linearity still holds (NOT GOOD for quantitative analysis) 1 • Unknowns should ideally fall within the standard range This work is licensed under a Creative Commons Attribution-Noncommercial-Share Alike 2.0 UK: England & Wales License Quantitative Analysis • A<1 – If A > 1: • Dilute the sample • Use a narrower cuvette – (cuvettes are usually 1 mm, 1 cm or 10 cm) • Plot the data (A v C) to produce a calibration ‘curve’ • Obtain equation of straight line (y=mx) from line of ‘best fit’ • Use equation to calculate the concentration of the unknown(s) This work is licensed under a Creative Commons Attribution-Noncommercial-Share Alike 2.0 UK: England & Wales License Quantitative Analysis Absorbance ( no units) Calibration curve showing absorbance as a function of metal concentration 1.2 y = 0.9982x 1 R2 = 0.9996 0.8 0.6 0.4 0.2 0 0 0.2 0.4 0.6 0.8 1 Concentration (mg L-1) This work is licensed under a Creative Commons Attribution-Noncommercial-Share Alike 2.0 UK: England & Wales License Statistical Analysis This work is licensed under a Creative Commons Attribution-Noncommercial-Share Alike 2.0 UK: England & Wales License Mean The mean provides us with a typical value which is representative of a distribution Mean the sum (å) of all the observations the number (N) of observations the sum (å) of all the observations Mean the number (N) of observations This work is licensed under a Creative Commons Attribution-Noncommercial-Share Alike 2.0 UK: England & Wales License Normal Distribution This work is licensed under a Creative Commons Attribution-Noncommercial-Share Alike 2.0 UK: England & Wales License Mean and Standard Deviation MEAN This work is licensed under a Creative Commons Attribution-Noncommercial-Share Alike 2.0 UK: England & Wales License Standard Deviation • Measures the variation of the samples: – Population std () – Sample std (s) • = √((xi–µ)2/n) • s =√((xi–µ)2/(n-1)) This work is licensed under a Creative Commons Attribution-Noncommercial-Share Alike 2.0 UK: England & Wales License or s? In forensic analysis, the rule of thumb is: If n > 15 use If n < 15 use s This work is licensed under a Creative Commons Attribution-Noncommercial-Share Alike 2.0 UK: England & Wales License Absolute Error and Error % • Absolute Error Experimental value – True Value • Error % Experimental value – T rue Value 100% T rue value This work is licensed under a Creative Commons Attribution-Noncommercial-Share Alike 2.0 UK: England & Wales License Confidence limits 1 = 68% 2 = 95% 2.5 = 98% 3 = 99.7% This work is licensed under a Creative Commons Attribution-Noncommercial-Share Alike 2.0 UK: England & Wales License Control Data • Work out the mean and standard deviation of the control data – Use only 1 value per group • Which std is it? or s? • This will tell us how precise your work is in the lab This work is licensed under a Creative Commons Attribution-Noncommercial-Share Alike 2.0 UK: England & Wales License Control Data • Calculate the Absolute Error and the Error % – True value of [SCN–] in the control = 2.0 x 10–3 M • This will tell us how accurately you work, and hence how good your calibration is!!! This work is licensed under a Creative Commons Attribution-Noncommercial-Share Alike 2.0 UK: England & Wales License Control Data Plot a Control Chart for the control data Quality Control Chart 4.00E-03 Control thiocyanate concentration (mol/L) 3.50E-03 3.00E-03 Control value inner limit inner limit outer limit outer limit group values 2.50E-03 2.00E-03 2 1.50E-03 2.5 1.00E-03 1 6 11 16 21 26 31 Measurement number This work is licensed under a Creative Commons Attribution-Noncommercial-Share Alike 2.0 UK: England & Wales License Significance • Divide the data into six groups: – Smokers – Non-smokers – Male – Female – Meat-eaters – Rabbits • Work out the mean and std for each group ( or s?) This work is licensed under a Creative Commons Attribution-Noncommercial-Share Alike 2.0 UK: England & Wales License Significance • Plot the values on a bar chart • Add error bars (y-axis) – at the 95% confidence limit – 2.0 This work is licensed under a Creative Commons Attribution-Noncommercial-Share Alike 2.0 UK: England & Wales License Significance Mean [SCN-] (M) Variation in [SCN-] in Saliva for Various Groups of Forensic Science Students (not REAL data) 9 8 7 6 5 4 3 2 1 0 Smokers NonSmokers Male Female Lions Rabbits This work is licensed under a Creative Commons Attribution-Noncommercial-Share Alike 2.0 UK: England & Wales License Identifying Significance • In the most simplistic terms: – If there is no overlap of error bars between two groups, you can be fairly sure the difference in means is significant This work is licensed under a Creative Commons Attribution-Noncommercial-Share Alike 2.0 UK: England & Wales License Acknowledgements • • • • • • • JISC HEA Centre for Educational Research and Development School of natural and applied sciences School of Journalism SirenFM http://tango.freedesktop.org This work is licensed under a Creative Commons Attribution-Noncommercial-Share Alike 2.0 UK: England & Wales License