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An Integrated Science Curriculum for First Year Students

Lisa Gentile

Department of Chemistry, University of Richmond

Acknowledgments

Back row: Ovidiu Lipan, Krista Stenger, Lisa Gentile, Mike Kerckhove, Doug Szajda, Carol Parish

Front row: Mirela Fetea, April Hill, Kathy Hoke, Lester Caudill, Barry Lawson

UR: Betsy Curtler, Ted Bunn

HHMI: Undergraduate Science Education Award

Integrated Quantitative Science (IQS)

http://iqscience.richmond.edu

/

PKAL- FIDL: http://www.nimbios.org/ifiles/KeckPKAL_IDL.pdf

How do we best prepare our students to work in an interdisciplinary environment?

When a group of faculty met in 2007 to ask that question

UR had strong momentum:

Renovated Science Center housing chemistry, biology, physics

New science faculty positions

(including 2 “interdisciplinary” science faculty from UR’s first

HHMI grant)

Strong science students

$900,000 Science Education

Grant #1 from HHMI

Success in securing external funding from major programs to increase interdisciplinary work

Teach the material from the first course in each of biology, chemistry, physics, mathematics, and computer science as one, integrated course.

Course team-taught by 5 faculty, one from each discipline.

Includes a hypothesis-driven, discovery based lab and a workshop.

Students then go on to complete a traditional major in any discipline.

Reassigned time to develop/implement/teach the course

Fall

Yr 1 (development):

1 course of 3

Yr 2 (first time teaching):

1 course of 2

Yr 3 : none

Yr 4 : none

Spring

2 courses of 2

Teaching (counts as “3”)

Teaching (counts as “2”)

Teaching (counts as “1”)

IQS Learning Goals:

Increased interdisciplinary and disciplinary understanding by students

Increased interdisciplinary understanding by faculty, as seen in the quality of integration in lectures and lab

Increased number of faculty in STEM disciplines equipped to create courses that draw on concepts from multiple disciplines

Increased number of students pursuing cross-disciplinary opportunities at our institution and beyond

Increased use by faculty of connections to other disciplines in their discipline-based courses.

Mandatory disciplinary topics in IQS

Discipline

Biology

Chemistry

Computer

Science

Mathematics

Physics

Topic constraints how modern biologists ask questions, scientific methodology, use of tools for observing natural world, quantitative skill building, statistical reasoning, data analysis, scientific communication kinetics, thermodynamics, equilibrium, acid-base chemistry, redox, electromagnetic radiation and Bohr model of atom, quantum mechanics, orbitals and electron configurations, bonding, VSEPR and hybridization, MO theory, Lewis structures, introduction to spectroscopy fundamental object-oriented programming, conditional and looping control structures, arrays, methods and parameter passing, file I/O integration: Riemann sums, numerical estimates, fundamental theorem, substitution integrals; average and instantaneous rates-of-change, the derivative as rate-ofchange, derivative and antiderivative shortcuts, linear approximations, definite integrals vectors, displacement, velocity, acceleration, linear and circular uniform and non-uniform motion, Newton’s laws and fundamental forces in nature, work, energy, energy transfer, linear momentum, oscillatory motion, and rotational motion: cross product, angular kinematics, angular momentum, torque, moment of inertia

Reassigned time to develop/implement/teach the course

Fall

Yr 1 (development): (3)

1 course of 3

Yr 2 (first time teaching) (2)

1 course of 2

Yr 3 : none

Yr 4 : none

Spring

(2)

2 courses of 2

(3)

Teaching (counts as “3”)

Teaching (counts as “2”)

Teaching (counts as “1”)

IQS-1

THEME: Antibiotic Resistance

•Mathematical models of disease spread

•Agent-based simulation models to study disease transmission/ antibiotic resistance

•Conformational flexibility of antibiotic molecule: computer-aided molecular visualization & simulation /VSEPR, VB, MO, energetic analysis

IQS-1

THEME: Antibiotic Resistance

Semester-long experiment: What types of bacteria are present in marine sponges (Clathria prolifera) that are resistant to antibiotics?

Creation of sponge stem cell primmorphs and their symbiotic bacteria that were treated with multiple antibiotic regimes, isolation of microbial DNA from primmorphs, amplification and cloning of

16S rDNA, sequencing, bioinformatics: automating comparison with

Genbank and analysis of bacterial DNA sequences (Java program)posters tonight

IQS-2

THEME: Signaling

Understanding signaling in the immune system upon activation by an inflammatory response: macrophages activated by LPS to induce transcription of the gene for inducible nitric oxide synthase (iNOS) & analysis by

Western blot and NO assay (Greiss reagents for NO

2

)

Use of genetic algorithm techniques to generate potential solutions to the traveling salesperson problem

IQS-2

THEME: Signaling

Kinetics of drug binding to wild type and multidrug resistant strains of HIV-1 protease: experimental & computational project

MRI (rotational motion). Gyroscopic motion angular velocity, cross product, angular momentum, torque. Resonance, relaxation

Brownian motion: classroom, experimental, and simulation approaches

Lessons learned

Allow the idea to come from the faculty and to allow us to define what we need to make it work.

Allow ample time for both development and implementation

Focus on group unity and community building activities

Ultimate faculty development

Challenges

• “Full” integration of the material

Team teaching with 5 faculty members from different disciplines

Small departments- development/early implementation stages

Computer science

Student selection

Integrated Science (IS) Minor

IQS-1 and 2 (or 1 st course in each of the 5 disciplines): 4U

IQS Research Training Seminar: 0.25U

Research

2 x ID course*

1U

2U

Senior IS seminar

Calculus II

0.5U

1U

*: Currently approved : bio-imaging, math models in biology and medicine, bioinformatics, theoretical/computational chemistry, evolutionary computing, systems biology, structural biology.

Coming soon : epidemiology

IQS Learning Goals:

Increased interdisciplinary and disciplinary understanding by students

Increased interdisciplinary understanding by faculty, as seen in the quality of integration in lectures and lab

Increased number of faculty in STEM disciplines equipped to create courses that draw on concepts from multiple disciplines

Increased number of students pursuing cross-disciplinary opportunities at our institution and beyond

Increased use by faculty of connections to other disciplines in their discipline-based courses.

Outputs

Number of applicants, demographics, number completing course. Year 1: 78, Year 2: 53 (includes physics pre-req)

Number of faculty teaching (& length of time) in IQS.

Lecture, lab, workshop materials for IQS.

Number of students from IQS involved in summer and AY research and

Number of students who continue with Research Training

Seminar and IS minor

The first IQS class (2009-2010) vs. the comparison group

IQS (09-10): Comparison:

20 -1 58 +1

17 55 Number remaining at

UR after 2 years

Percentage of students staying for a full time research experience the summer following IQS

100% 9%

61% 22% Percentage of students staying for a full time research experience the

2 nd

summer following

IQS

Percentage of students with credit for academic year research

Percentage of students who took sophomore level research training seminar

100%

79%

25%

0%

Short Term Outcomes

Increased appreciation for the value of ID learning

Increased disciplinary understanding in each of the 5 disciplines among students who take IQS

Increased ID understanding in the faculty as seen by quality/level of integration of disciplines in lectures/labs

Evaluation Questions

1. How effective was IQS in teaching science to studentsboth disciplinary-specific and ID topics?

a. ID: RISC* b. Disciplinary-specific: Next courses in major c. Students continue in the sciences (courses, majors and careers)

*: http://www.grinnell.edu/academic/psychology/faculty/dl/risc

RISC data: IQS students pre-test/ IQS students post-test; all students pre-test/ all students post-test

Student work on problems where no one knows the outcomes

2009-2010 2010-2011

3.00/3.82;

3.06/3.18

2.47/3.94;

2.98/3.21

Students use instruments/materials from other fields of study

Students find similarities/differences between disciplines

2.33/3.94;

2.90/3.07

2.89/4.41;

3.44/3.24

2.79/3.47;

2.88/3.11

3.42/3.72;

3.43/3.33

Students talk with faculty members from other disciplines

2.63/4.29;

3.16/3.12

Students ask questions that implicate more than one discipline in an answer

2.78/4.35;

3.21/3.45

Students create new metaphors, analogies, or models to understand

2.56/4.24;

2.88/3.24

New insights emerge from students considering multiple disciplines

2.50/4.12;

2.79/3.15

3.32/4.00;

3.17/3.22

2.89/3.59;

3.23/3.48

2.68/3.59;

2.85/3.30

2.37/3.50

;

2.77/3.30

RISC data: IQS students pre-test/ IQS students post-test; all students pre-test/ all students post-test

Students present intellectual work in posters

Read a text book

A problem where students have input into process or topic

Students attempt complete understanding of a complex problem

Students use computer modeling of complex systems

Students work on a project or problem entirely of their own design

Students write a research proposal

2009-2010 2010-2011

2.22/4.59;

3.03/3.03

4.56/2.38;

4.31/2.97

2.00/4.64;

3.15/3.85

2.89/4.24;

3.28/3.59

1.22/4.00;

2.15/2.97

2.11/3.40

;

2.87/3.74

1.78/3.50;

2.44/2.96

3.16/3.44;

2.99/3.01

4.11/2.50;

4.28/2.80

2.32/3.31;

3.13/3.80

2.84/3.47;

3.27/3.67

1.53/3.72;

2.12/3.26

1.89/2.31;

2.83/3.71

1.42/1.85;

2.40/3.00

Evaluation Questions

1. How effective was IQS in teaching science to studentsboth disciplinary-specific and ID topics?

a. ID: RISC b. Disciplinary-specific: Next courses in major c. Students continue in the sciences (courses, majors, and careers)

Force Concept Inventory:

basic concepts in Newtonian physics

Gain = (posttest%-pretest%)/(100-pretest%)

62 intro physics courses, 6542 students (Hake, 1998, Am. J. Phys ., 66, 64-74)

*: other goals

Evaluation Questions

1. How effective was IQS in teaching science to studentsboth disciplinary-specific and ID topics?

a. ID: RISC b. Disciplinary-specific: Next courses in major c. Students continue in the sciences (courses, majors, and careers)

Science courses in the first 2 years: the first IQS class (2009-2010) vs. the comparison group

Percentage of students who took a second course in one of the five disciplines

Percentage of students that took a second course in two of the five disciplines

Percentage of students that took a second course in three of the five disciplines

Percentage of students that took a second course in four of the five disciplines

Percentage of students that took a second course in five of the five disciplines

IQS (09-10): Comparison:

17

100%

55

88% (94%)

94% (100%) 73% (78%)

77% (94%) 32% (58%)

24% (44%) 7% (18%)

0% 0%

Mean number of courses the 2009-2010 IQS students took vs. the comparison group

5

4,5

4

3,5

3

2,5

2

1,5

1

0,5

0

IQS

No IQS

BIOL CHEM MATH

Subject

PHYS CMSC

The first IQS class (2009-2010) vs. the comparison group

Percentage of students declaring a major in one of the 5 areas at end of 2 nd

year

Percentage of students declaring a major not in the sciences at the end of 2 nd

year

IQS (09-10): Comparison:

17

94%

55

60%

0% 29%

Evaluation Questions

2. How did teaching IQS change the way in which faculty teach other courses?

a. New cross-disciplinary courses at the upper level are developed and taught: three new interdisciplinary courses have been designed for the IS minor

(systems biology, theoretical/computational chemistry, structural biology) b. Examples, exercises, and problems that emphasize interdisciplinary understanding developed for the

IQS course are used by faculty in traditional discipline-specific courses.

Evaluation Questions

3. Are concepts from each discipline integrated in lectures and labs developed for IQS course?

a. faculty designed and added new integrated projects to the second offering of IQS

Evaluation Questions

4. How effective was the IQS course in training students to problem solve in an ID manner, as seen in their research projects as well as in their future courses?

PKAL- FIDL: http://www.nimbios.org/ifiles/KeckPKAL_IDL.pdf

Acknowledgments

Back row: Ovidiu Lipan, Krista Stenger, Lisa Gentile, Mike Kerckhove, Doug Szajda, Carol Parish

Front row: Mirela Fetea, April Hill, Kathy Hoke, Lester Caudill, Barry Lawson

UR: Betsy Curtler, Ted Bunn

HHMI: Undergraduate Science Education Award

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