MLS 311: Clinical Chemistry Proteins Clinical Chemistry I Proteins Objectives: Upon completion of this lesson, the student will be able to: Student Learning Outcomes: Exercise independent judgement and critical thinking to correlate and recognize discrepancies SLO #3 associated with normal and abnormal test results using patient history, characteristics, and demographics. Demonstrate effective oral or written communication with other students, faculty, patients, SLO #5 professional colleagues, physicians, other members of the health care team, and the public to effectively and efficiently transmit test results and instructions. Demonstrate and value professional conduct that includes compassion, concern, integrity and SLO #7 respect when dealing with patients, colleagues, faculty, students, physicians, other members of the health care team and the public independent of race, sex, religion, ethnicity or diversity. Practice and demonstrate the use of appropriate ethical standards in all matters related to medical SLO #8 information and patient care including strict adherence to patient confidentiality rights as mandated by the Health Insurance Portability and Accountability Act (HIPAA). Cognitive: C1:12 C1:13 C1:13A C1:13B C1:13C C1:13D C1:14 C1:15 C1:15A C1:16 C1:17 C1:18 C1:19 C1:19A C1:19B C1:19C C1:19D C1:19E C1:19F C1:19G C1:20 C1:20A C2:3 C2:3A C2:3B C2:3C C2:3D Identify and differentiate proteins from other organic molecules based on their structure including the presence of amine, carboxylic acid functional groups, and amino acids. Define the levels of protein structure including the chemical interactions and molecules involved in the formation and stabilization of the structure. Primary (peptide bonds) Secondary (hydrogen bonds, alpha helices and beta sheets) Tertiary (protein domains, globular and fibrous, hydrophobic interactions, disulfide bonds, coiled coils, barrels) Quaternary Define amphipathic and amphoteric as it relates to protein structure Outline the process of protein digestion and absorption (metabolism). Define diurnal and explain the effect on metabolism and protein concentrations. Define proteins as simple, conjugated, and Apo proteins and provide examples of each. Define hyperproteinemia and hypoproteinemia. Define exudate and transudate. Define the clinically significant serum proteins and their normal physiological role. Pre-albumin [transthyretin] and retinol-binding protein [RBP] Albumin Alpha 1 globulins (alpha 1 antitrypsin, alpha 1 lipoprotein, alpha 1 fetoprotein, alpha 1 acid glycoprotein, alpha 1 carcinoembryonic antigen [CEA] Alpha 2 globulins (haptoglobin, alpha 2 macroglobulin, ceruloplasmin, alpha 2 lipoprotein) Beta globulins (transferrin,C-reactive protein, complement factors, fibrinogen, beta-lipoprotein Gamma globulins (IgM, IgG, IgA, IgE, IgD, Bence Jones proteins) Proteins in other body fluids. Define and differentiate protein chemical digestion and denaturation List and explain chemical and physical factors that can denature, coagulate or alter protein structure. Explain and perform the methodologies used for quantitating total protein and clinically significant individual proteins in serum and other body fluids including the chemical principle, interfering substances and clinical use of each. Kjedahl Direct Photometric Biuret (urine, serum) Dye-Binding (urine, serum) Revised 10/10/2023 1 MLS 311: Clinical Chemistry Proteins C2:3F C2:3G C2:4 C2:7 C2:19 C2:24 C4:12 C4:12:G C4:157 C4:158 Affective: G1:1G1:4L Refractometry Turbidometric or Nephelometric Define chromatography, column chromatography, derivitization, mobile phase, resolution, detector, retention factor, retention time, stationary phase and planar chromatography. Describe and differentiate internal standard, ion exchange, partition, adsorption, steric exclusion, thin-layer and affinity chromatography including principles of separation, stationary and mobile phases, and clinical applications. Define the following terms in association with mass spectrometry: base peak, ion trap, mass analysis, mass-to-charge ratio, molecular ion, product/fragment ion, proteomics and timeof-flight. Define the following: agarose, ampholyte, amphoteric, blot/blotting, densitometry, electroendosmosis, electrophoresis, electrophoretic mobility, polyacrylamide and wick flow. Define the clinical significance of proteins in other body fluids including reference range and quantitation Fetal fibronetciin Define and explain the physiological function for myoglobin, troponin I and T, natriuretic peptides (A, B, and C forms), C-reactive protein and homocysteine Explain the formation, measurement, and clinical significance of modified albumin, and how it may be utilized in conjunction with troponin and myoglobin results. During all laboratory and lectures sessions, students are expected to comply with the General Laboratory Practice/Behavioral objectives provided on the Master Coded Curriculum Document. Reading Assignment: Bishop, M. L., Fody, E. P., & Schoeff, L. E.: Clinical Chemistry: Principles, Techniques, and Correlations, 9th Edition (2022). Chapter 6 Proteins and Heme Derivatives Additional Materials: Power points: Proteins Part 1 & 2, Clinically Significant Proteins, Protein Electrophoresis Revised 10/10/2023 2