BIOL 2420 Syllabus Dallas College Eastfield Campus Contacting Your Instructor Instructors typically respond to emails from students within 24 hours. However, over the weekend and holiday periods responses may be delayed. Find out more about contacting your instructor. Email The best way to contact me is through email. ALL email messages MUST include the following: 1. First and last name 2. Course and section 3. Detailed question, especially if it concerns a test question or a particular part of an assignment. I will try to respond to any emails (or phone messages) within 24 hours, longer over weekends. IMPORTANT: I CANNOT include any sensitive information (such as grades) in emails to your personal email accounts. You MUST use your Dallas College email address for any communication between you and me that contains sensitive information. Instructor Information Name: Dr. Jessica Kerins DCCCD Email: jkerins@dcccd.edu Office Phone: 972-860-8317 Office Location: C309 Office Hours: MW 10 -11:30am (C309), T 11am-12pm (C309), TH 11am-12pm (VIRTUAL), or by appointment Information Central Office and Phone: Room C202, 972-860-7336 Course Information Course Title: Microbiology for Non-Science Majors Course Number: BIOL 2420 Section Number: 41812 Semester/Year: FALL 2023 Credit Hours: 4 1 Class Meeting Time/Location: LEC: MW 11:30 am-12:50pm C324 Eastfield Campus, LAB: MW 1:00-3:00pm S300 Eastfield Campus Certification Date: 09/01/2023 Last Day to Withdraw: 11/09/2023 Disclaimer The instructor reserves the right to amend this syllabus as necessary. The Dallas College Department of Biology requires monitored/proctored testing during exams and/or high stakes assessments. In order to ensure transferability of Dallas College courses to other institutions, proctored/monitored assessments are necessary for course integrity. Online quizzes and exams in this class will require the use of Respondus Lockdown Browser. See the Brightspace course site for instructions on how to download this browser to your device and use it to take a quiz or exam. Course Prerequisites BIOL 1406 or BIOL 2401 or SCIT 1407 Course Description This course covers basic microbiology and immunology and is primarily directed at pre-nursing, pre-allied health, and non-science majors. It provides an introduction to historical concepts of the nature of microorganisms, microbial diversity, the importance of microorganisms and acellular agents in the biosphere, and their roles in human and animal diseases. Major topics include bacterial structure as well as growth, physiology, genetics, and biochemistry of microorganisms. The lab covers basics of culture and identification of bacteria and microbial ecology. Lecture and lab emphasis is on medical microbiology, infectious diseases, and public health. (3 Lec., 4 Lab.) Coordinating Board Academic Approval Number 2605035103 Student Learning Outcomes Upon successful completion of this course, students will: 1. Describe distinctive characteristics and diverse growth requirements of prokaryotic organisms compared to eukaryotic organisms. 2. Provide examples of the impact of microorganisms on agriculture, environment, ecosystem, energy, and human health, including biofilms. 3. Distinguish between mechanisms of physical and chemical agents to control microbial populations. 2 4. Explain the unique characteristics of bacterial metabolism and bacterial genetics. 5. Describe evidence for the evolution of cells, organelles, and major metabolic pathways from early prokaryotes and how phylogenetic trees reflect evolutionary relationships. 6. Compare characteristics and replication of acellular infectious agents (viruses and prions) with characteristics and reproduction of cellular infectious agents (prokaryotes and eukaryotes). 7. Describe functions of host defenses and the immune system in combating infectious diseases and explain how immunizations protect against specific diseases. 8. Explain transmission and virulence mechanisms of cellular and acellular infectious agents. 9. Use and comply with laboratory safety rules, procedures, and universal precautions. 10. Demonstrate proficient use of a compound light microscope. 11. Describe and prepare widely used stains and wet mounts, and discuss their significance in identification of microorganisms. 12. Perform basic microbiology procedures using aseptic techniques for transfer, isolation and observation of commonly encountered, clinically significant bacteria. 13. Use different types of bacterial culture media to grow, isolate, and identify microorganisms. 14. Perform basic bacterial identification procedures using biochemical tests. 15. Estimate the number of microorganisms in a sample using methods such as direct counts, viable plate counts, or spectrophotometric measurements. 16. Demonstrate basic identification protocols based on microscopic morphology of some common fungi and parasites. Texas Core Objectives The College defines essential knowledge and skills that students need to develop during their college experience. These general education competencies parallel the Texas Core Objectives for Student Learning. In this course, the activities you engage in will give you the opportunity to practice two or more of the following core competencies: 1. Critical Thinking Skills - to include creative thinking, innovation, inquiry, and analysis, evaluation and synthesis of information 2. Communication Skills - to include effective development, interpretation, and expression of ideas through written, oral, and visual communication 3. Empirical and Quantitative Skills - to include the manipulation and analysis of numerical data or observable facts resulting in informed conclusions 4. Teamwork - to include the ability to consider different points of view and to work effectively with others to support a shared purpose or goal 3 Required Course Materials If your Dallas College course requires learning materials, then they will be provided as part of the IncludED program (dcccd.edu/included). You will access the materials online via your Brightspace course. Note: If you chose to opt out of the IncludED program, then you are responsible for obtaining all your required learning materials before the first day of the class. For more details, see Institutional Policies. Opting out is strongly discouraged. TEXTBOOK: Microbiology with Diseases by Body System (e-text) & MasteringMicrobiology, 5th edition, Bauman, R. W., Benjamin- Cummings Publishing Company, 2016, San Francisco, CA. ISBN 9780136780175. *It is highly recommended that you download this digital textbook to your computer so you can access it without the internet and without Brightspace. Instructions cand be found in Brightspace. LAB BOOK: Undergraduate Microbiology Laboratory Manual, 3rd edition, Oliver, T. D., Bluedoor Publishing, 2022, Minneapolis. ISBN 9781774947050. Note: A student of this institution is not under any obligation to purchase a textbook from a university-affiliated bookstore. The same textbook may also be available from an independent retailer, including an online retailer. Graded Work The tables below provide a summary of the graded work in this course and an explanation of how your final course grade will be calculated. Summary of Graded Work Assignments Points Totals Syllabus Quiz 20 20 8 Pre-Lab quizzes 10 80 8 Post-Lab worksheets 10 80 14 Homework Assignments 15 210 4 Lecture exams 100 400 3 Laboratory exams 100 300 20 20 100 100 Materials and Methods table 1 Laboratory report (Unknown Project) 4 Assignments Points Class participation/attendance Class activities TOTAL Totals 50 50 100 100 1360 Final Grading Scale Your final grade will be determined based on how many total points you have accumulated. Points Percentage Letter Grade 1224 -1360 90 – 100% A 1088 -1223.9 80 – 89% B 952 -1087.9 70 – 79% C 816 - 951.9 60 – 69% D 0 - 815.9 0 – 59% F I DO NOT round up grades I DO NOT give Incompletes Description of Graded Work The Syllabus Quiz is an online quiz in Brightspace that covers the material found in the course syllabus and schedule. See the course schedule for the due date. You MUST use Respondus Lockdown Browser to take this quiz. Instructions can be found in Brightspace Pre-lab quizzes are designed to prepare you for each weekly lab. They will be taken online in Brightspace. They may consist of fill-in-the-blank, multiple choice, and/or short answer essay questions. You DO NOT need Respondus Lockdown Browser for these quizzes. You may use your lab books when completing these quizzes to ensure that you have thouroughly read both the background and procedure for each lab. See the Course Schedule for deadlines. Any quiz not submitted by the posted deadline will receive a score of ZERO, no exceptions. I will NOT reset any quiz for any reason!!! Post-lab worksheets summarize the experiments completed in lab each week. They are due by the end of the lab period every Thursday, NO EXCEPTIONS. See the Course Schedule for due dates. Homework assignments review the important lecture material from each chapter. Each assignment is completed through the textbook’s companion website, MasteringMicrobiology, 5 which is accessible directly within Brightspace. Homework will consist of tutorials, activities, and multiple choice questions. See the Course Schedule for deadlines. Lecture exams will be taken during class time and may consist of matching, true/false, multiple choice and essay questions. You will need a scantron for each exam. PLEASE NOTE: Unless otherwise noted, ONLINE quizzes and exams in this class will require the use of Respondus Lockdown Browser. Instructions on how to download and use this browser are provided in the Brightspace site for this course. NOT ALL DEVICES will work with Respondus Lockdown Browser (Chromebooks, for example). Please confirm that your device is compatible BEFORE the first day of class! If you do not have a compatible device, you will need to find one for this class. One option is to take your quizzes and exams on the Eastfield campus, using a campus computer. Laboratory exams will be taken during lab time. They may consist of fill-in-the-blank, multiple choice and/or short answer essay questions. If a laboratory exam is missed, you will receive a grade of ZERO for the exam. The Materials and Methods table is an assignment to help you prepare for the Unknown Project. More details will be given in class. One Laboratory Report will be completed as part of the Unknown Project. You will be given a culture of an unknown microorganism and asked to identify the organism through standard techniques available to you in the lab. You will write a formal lab report on the project that will include your lab journal entries, a flow chart, and a descriptive chart. Specific details will be given during the semester. Students are expected to work independently when conducting the biochemical experiments for the lab report. All staining, microscopy, inoculations and evaluations must be completed ALONE, without the help of fellow students. Students may ask opinions from each other regarding the appearance of test results, but the interpretation must be completed independently. If someone in the class helps you all student participants will receive a grade of ZERO for the paper. The instructor may not be consulted during the experiment process. Class participation/attendance: ACTIVE participation in this class is necessary if you want to do well. I expect each student to be prepared and to fully engage in the lecture part of this class (ask/answer questions, contribute to discussions, contribute equally to any group activities). During lab, I expect each student to be prepared by having thoroughly read the lab procedures so you understand what is to be accomplished during lab time. Some of our labs will take the ENTIRE amount of lab time, so there will be little opportunity for me to introduce the lab – you MUST be prepared! I also expect each student to equally contribute to the completion of the tasks of the day; DO NOT rely on your tablemates to do the work for you, or you will lose points! You MUST be a contributing member of your group! This grade also 6 includes adherence to the attendance policy, which is described below. You will be working in teams for much of the semester, so it is important that you treat each other fairly and with respect, as well as be able to resolve conflict in an adult manner. Class activities consist of various activities, such as quizzes, worksheets, and case studies. They may or may not be announced ahead of time. Most activities will be completed as a group during class time. You MUST be present in class to complete and receive credit for these activities. No make-up assignments will be given. Attendance and Your Final Grade Attendance is mandatory for both class and lab. Students are expected to be on time and remain for the entire class/lab. You must be present in class at least ONCE by the certification date in order for me to certify your attendance in this class. You may miss 3 classes or labs without penalty. After that, I will note each additional absence and each will affect your class participation grade. I do not distinguish between excused and unexcused absences, so there is no need to notify me. If you arrive late to class, it is YOUR responsibility to notify me IN WRITING BY THE END OF THAT CLASS period that you were late. Failure to do so will result in you being marked absent. Please include the following: 1. First and last name 2. Date 3. Course and section 2 tardies equals 1 absence, therefore tardies will also affect your participation grade. They also affect your group’s ability to complete assignments. PLEASE BE ON TIME!! PLEASE NOTE: 1. Most of our labs are 2-day activities, with the bulk of the experiments being performed on Mondays. If you are absent from lab on a Monday, is it not fair to expect your team members to catch you up and give their data to you to analyze without you actually contributing to the experiment. This is especially true if you are absent repeatedly on Mondays. Therefore, Monday absences will count against you MORE than Wednesday absences. 2. Weeks 8 and 9 are especially important to your success in this class. During Week 8, each member of the class will perform a series of biochemical experiments on a different microbe. Each student’s data is vital to the entire class for the purpose of the Unknown Project. Furthermore, these experiments give you the chance to practice performing the inoculations and reading/interpreting the results with the help of the instructor, before you complete these independently with your unknown bacterium. Week 9 marks the beginning of the Unknown Project; it is vital that you are present during lab so you have 7 the maximum amount of time to complete this project. If you are absent during any part of these weeks, each day will count as 2 absences. YOU are responsible for finding out FROM YOUR CLASSMATES what you may have missed due to an absence in class or lab. Refer to Brightspace, the schedule, and other students to obtain this information, especially missed announcements. DO NOT ask me, “What did I miss?” Late Work/Make-Up Policy All quizzes, tests, and homework assignments are time sensitive, and must be SUBMITTED (not merely started) by the posted deadlines. I DO NOT accept late work for ANY reason. If a deadline is missed, you will receive a grade of ZERO for that assignment, quiz, or test. There is NO make-up work in this class. YOU are responsible for knowing when assignments are due and for submitting them on time. If a medical emergency or other type of emergency prevents you from either submitting an exam on time or coming to campus to take an exam, I MIGHT grant you a make-up opportunity with proper documentation. Make-up exams will be granted on a case-by-case basis. If you have a planned absence that cannot be avoided on an exam day, please make arrangements with me to take the exam early. Late exams will not be granted in this case. IMPORTANT: I will NOT grant make-up exams or assignments for vacations. NO EXCEPTIONS. The school calendar is published well in advance of the beginning of each school year. Do NOT plan vacations when school is in session. Cheating, Plagiarism and Collusion Scholastic dishonesty is a violation of the Code of Student Conduct and Hazing. Scholastic dishonesty includes, but is not limited to, cheating on a test, plagiarism and collusion. Cheating includes copying from another student’s test or homework paper; using materials not authorized; collaborating with or seeking aid from another student during a test; knowingly using, buying, selling, stealing or soliciting (asking for) the contents of an un-administered test; and substituting for another person to take a test. Examples of cheating include: • Using your phone to look up answers while you take a quiz or exam • Using your books, notes, and/or internet or other sources while taking a quiz or exam • Working with another student while taking an exam or quiz • Showing your answer to another student who has not yet taken an exam or quiz • Sharing information about a quiz or exam with another student • Having someone else take the exam for you 8 Plagiarism is the appropriating (taking in a way that is illegal or unfair), buying, receiving as a gift or obtaining by any means another’s work and the unacknowledged submission or incorporation of it in one’s own written work. Examples of plagiarism include: • Copying another student’s essay answers and claiming them as your own • Copying answers from the internet and claiming them as your own • Using Artificial Intelligence to write your essay answers or assignments Collusion is the unauthorized collaboration with another person in preparing written work for fulfillment of course requirements Examples of collusion include: • Working together with another student on essay questions Cheating, plagiarism, and collusion are considered acts of academic dishonesty. The first incident of academic dishonesty will result in a ZERO for that particular assignment or exam. The second incident will result in a failing grade for the course AND I will report you for a Student Code of Conduct violation. Other Course Policies Standard of Conduct/Classroom Etiquette No food, drinks or tabacco products are in the laboratory. No food or drink Is permitted in the laboratory. These items must be kept outside the lab, in the student’s belongings, or in provided storage places (if applicable). All Laboratory in-person meetings require the student to wear closed-toed shoes and wear protective eyewear (goggles/safety glasses). Please be prepared to secure any loose items (clothing, hair, etc.). Be respectful of both the instructor and fellow students. This includes no talking during class, especially when the instructor or another student is speaking. No children are allowed in classrooms or laboratories. Expectations of this course • Expect to work on class activities and some lab experiments WITH YOUR GROUP. Groups will be determined in lab. • Expect to bring both your digital lecture book and your lab book every day. 9 • Many of the assignments in this course are completed online. You are expected to have basic computer and internet skills and be able to troubleshoot minor problems on your own. For those problems you cannot fix by yourself, you should know how to contact the appropriate person to help you. I am NOT tech support! The contact information for various tech support can be found in Brightspace. Testing Policies Students are not allowed to leave the room for any reason during an exam. All electronic devices must be turned off and put away, in addition to all other personal items. Visual Accommodations If you require visual accommodations, alternative lab quizzes and exams will be made available through the Accessibility Services Office. Posted deadlines for each assessment still apply. You must contact the Accessibility Services Office and follow their instructions to be granted accommodations. You can call 972-669-6400 or email DSSO@dcccd.edu for more assistance. Institutional Policies Institutional Policies include information about tutoring, Disabilities Services, class drop and repeat options, Title IX, and more. 10 Week (Mon-Sun) COURSE SCHEDULE Lecture Lab Assignments/Notes Due TUES, 8/22: “Hello” Discussion Board, Syllabus Quiz Due WED, 8/23 in lab: Post-lab #1 Due SUN, 8/27: CH3 &11 HW, CH5 HW, Pre-lab Quiz #1 Due MON, 8/28 in lab: Dichotomous Key Part 1 Due WED, 8/30 in lab: Post-lab #2 Due SUN, 9/3: CH6 HW, Pre-lab Quiz #2 Ch. 1: A Brief History of Microbiology (p. 1-17) Ch. 3: Cell Structure and Function (p. 57-79) Ch. 11: Characterizing and Classifying Prokaryotes 2: Microscopy 3: Aseptic Transfers 4: Simple Stain & Bacterial Smear Week 2 8/28-9/3 Ch. 5: Microbial Metabolism (p. 125-143) 4: Simple Stain & Bacterial Smear 5: Gram Stain 6: Acid-Fast Stain 7: Endospore Stain Week 3 9/4-9/10 NO CLASS MON 9/4 Ch. 6: Microbial Nutrition and Growth NO LAB MON 9/4 8: Isolation of Microbes 9: Serial Dilution Week 4 9/11-9/17 MON 9/11: Catch-up/Review WED 9/13: Lecture Exam 1 (CH 1,3,5,6,11) Finish Labs 8&9 10: Cultural Characteristics 11: Selective, Differential, and Enriched Media Week 5 9/18-9/24 Ch. 7: Microbial Genetics MON 9/18: Review WED 9/20: Lab Exam 1 (1-11) Week 6 9/25-10/1 Ch. 9: Controlling Microbial Growth in the Environment Ch. 10: Controlling Microbial Growth in the Body 12: Effect of Temperature 13: Effect of pH 14: Effect of Oxygen Week 7 10/2-10/8 Ch. 13: Characterizing and Classifying Viruses, Viroids, and Prions 15: Antibiotic Susceptibility 16: Chemical Control of Microbial Growth Week 8 10/9-10/15 MON 10/9: Catch-up/Review WED 10/11: Lecture Exam 2 (CH 7,9,10,13) 17: Biochemicals (preparing for Unknowns) Week 9 10/16-10/22 Ch. 14: Infection, Infectious Diseases, and Epidemiology Ch. 15: Nonspecific Lines of Defense Unknowns Due SUN, 10/22: CH16 HW Week 10 10/23-10/29 Ch. 16: Specific Defense: The Immune Response Ch. 17: Immunization and Immune Testing (p. 499507) Unknowns Due SUN, 10/29: CH18 HW, UNKNOWN PAPER Week 11 10/30-11/5 Ch. 18: AIDS and Other Immune Disorders Week 1 8/21-8/27 Due SUN, 9/10: Pre-lab Quiz #3 Due WED, 9/13 in lab: Dichotomous Key Part 2, Post-lab #3, Post-lab #4 Due SUN, 9/17: CH7 HW Due SUN, 9/24: CH9 HW, CH10 HW, Pre-lab Quiz #4 Due WED, 9/27 in lab: Post-lab #5 Due SUN, 10/1: CH13 HW, Pre-lab Quiz #5 Due MON, 10/2 in lab: Dichotomous Key for Unknowns Due WED, 10/4 in lab: Post-lab #6 Due SUN, 10/8: Pre-lab Quiz #6 Due WED, 10/11 in lab: Materials and Methods table Due SUN, 10/15: CH14 HW, CH15 HW MON 10/30: Review WED 11/1: Lab Exam 2 (12-17) Due SUN, 11/5: Pre-lab Quiz #7 Week 12 11/6-11/12 MON 11/6: Catch-up/Review WED 11/8: Lecture Exam 3: CH 14-18 19: Protozoa Due WED, 11/8 in lab: Post-lab #7 Due SUN, 11/12: CH19&20 HW, Pre-Lab Quiz #8 Last day to withdraw: 11/9 Week 13 11/13-11/19 Ch. 19: Diseases of the Skin and Wounds Ch. 20: Diseases of the Nervous System and Eyes 21: Mycology: Fungi 20: Helminths Due WED, 11/15 in lab: Post-lab #8 Due SUN, 11/19: CH21&22 HW Week 14 11/20-11/26 Ch. 21: Cardiovascular and Systemic Diseases Ch. 22: Diseases of the Respiratory System MON 11/20: SEM Demo Due SUN, 11/26: CH23&24 HW Week 15 11/27-12/3 Ch. 23: Diseases of the Digestive System Ch. 24: Diseases of the Urinary and Reproductive Systems MON 11/27: Review for Lab Exam WED 11/29: Lab Exam 3 (19-21) Week 16 12/4-12/7 MON 12/4: Lecture Exam 4 (CH 19-24) NO LAB COURSE SCHEDULE