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Marginal Structural Models for Physical Activity & Blood Pressure

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Article
A graphical perspective of marginal
structural models: An application
for the estimation of the effect of
physical activity on blood pressure
Statistical Methods in Medical Research
0(0) 1–9
! The Author(s) 2016
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DOI: 10.1177/0962280216680834
smm.sagepub.com
Denis Talbot,1,2,3 Amanda M Rossi,4,5,6 Simon L Bacon,4,5
Juli Atherton1 and Geneviève Lefebvre1
Abstract
Estimating causal effects requires important prior subject-matter knowledge and, sometimes, sophisticated statistical
tools. The latter is especially true when targeting the causal effect of a time-varying exposure in a longitudinal study.
Marginal structural models are a relatively new class of causal models that effectively deal with the estimation of the
effects of time-varying exposures. Marginal structural models have traditionally been embedded in the counterfactual
framework to causal inference. In this paper, we use the causal graph framework to enhance the implementation of
marginal structural models. We illustrate our approach using data from a prospective cohort study, the Honolulu Heart
Program. These data consist of 8006 men at baseline. To illustrate our approach, we focused on the estimation of the
causal effect of physical activity on blood pressure, which were measured at three time points. First, a causal graph is built
to encompass prior knowledge. This graph is then validated and improved utilizing structural equation models. We
estimated the aforementioned causal effect using marginal structural models for repeated measures and guided the
implementation of the models with the causal graph. By employing the causal graph framework, we also show the validity
of fitting conditional marginal structural models for repeated measures in the context implied by our data.
Keywords
marginal structural models, causal diagrams, time-dependent confounding, times-varying exposure, variable selection
1 Introduction
Estimating the causal effect of a time-varying exposure with covariate-adjusted regression models can lead to
biased estimates if a time-varying confounding covariate is an effect of previous exposure.1,2 For instance, Hernán
et al. explain why adjusting for such time-dependent confounders by including them as additional regressors in a
generalized estimating equation (GEE) regression can yield inappropriate inferences.2 The most common
implementation of marginal structural models (MSMs) omits covariates in the outcome model and effectively
deals with time-dependent confounding using inverse probability weighting.2–4 When implementing MSMs in such
a way, a weight is computed for each individual and consists of the product over the inverse propensities at each
time point of receiving the observed treatment given prior covariates and treatments. An MSM eliminates
confounding if the sequential randomization assumption is satisfied, but identifying an appropriate set of
covariates for calculating the weights is challenging in practice.5
1
Département de Mathématiques, Université du Québec à Montréal, Québec, Canada
Département de Médecine Sociale et préventive, Université Laval, Québec, Canada
3
Unité Santé des Populations et Pratiques Optimales en Santé, Centre de recherche du CHU de Québec – Université Laval, Québec, Canada
4
Department of Exercise Science, Concordia University, Québec, Canada
5
Montreal Behavioural Medicine Centre, CIUSS-NIM, Hôpital du Sacré-Coeur de Montréal, Québec, Canada
6
Division of Clinical Epidemiology, Research Institute of the McGill University Health Centre, Québec, Canada
2
Corresponding author:
Denis Talbot, Département de médecine Sociale et préventive, Université Laval, Québec, Canada.
Email: denis.talbot@fmed.ulaval.ca
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Statistical Methods in Medical Research 0(0)
MSMs have traditionally been embedded in Rubin’s counterfactual framework to causal inference,6 even
though causal graphs have previously been used to illustrate the relationships between variables in MSMs
analyses.1,7 In this paper, we propose to further embed MSMs in the graphical framework to enhance the
implementation of these models.8 This graphical framework entails using graphs to represent the relationships
between variables of primary interest and their potential confounders and is notably becoming one of the most
popular tools to perform causal inference in epidemiology and other medical sciences. One of the main reasons this
graphical framework has become so popular is because it provides simple rules for selecting adjustment variables
to eliminate or reduce confounding bias that can be verified by inspecting the graph. We therefore expect our
proposed methodology to aid in the practical implementation of MSMs.
We illustrate our approach by estimating the causal effect of physical activity on blood pressure (BP) using
data from the Honolulu Heart Program (HHP). The first step of our methodology is to build, based on
substantive prior knowledge, an initial graph to represent the relationships between the variables of primary
interest and the potentially confounding covariates. This graph is then validated and improved using the data.
Lastly, the implementation of the MSMs is directly guided by the final improved graph. We are unaware
of any previous work wherein the implementation of MSMs was based on a graph tested against the
observed data.
The primary aim of this paper is two-fold: (1) illustrate the statistical methodology we used to estimate the effect
of physical activity on BP; (2) compare the results obtained using our graphical approach with those obtained
using a naive approach for selecting the variables utilized in the weights’ models. A secondary aim is to show the
validity of fitting conditional marginal structural models for repeated measures (MSMRMs) in the context implied
by our data.
2 Data
The HHP is a prospective cohort study that followed 8006 Japanese-American men living on the island of Oahu,
Hawaii from 1965 until 1994. The participants were initially recruited between 1965 and 1968 from a listing of
selective service registrants. The data collection protocol has been described elsewhere.9 Our analyses were based
on three examinations for which comparable measures of physical activity, and both systolic BP and diastolic BP
(SBP and DBP, respectively) were taken: Visit 1 (1965–1968), Visit 2 (1968–1971) and Visit 3 (1991–1993).
The main variables of interest were self-reported physical activity (1 ¼ moderate activity or more, 0 ¼ less than
moderate activity), SBP (in mmHg) and DBP (in mmHg). For our illustration, we also considered the HHP
variables that were identified as clinically relevant or as potential confounders, and that were measured in a
similar manner at all three visits. Those variables, which are all time-varying, were: age (in years), employment
status (currently employed or not), body mass index (BMI, in kg/m2), smoking status (current smoker, previous
smoker or never smoker) and anti-hypertension medication usage (yes or no).
3 Building the causal graph
The issue of confounding is particularly challenging in the context of longitudinal data, such as the HHP, where
intermediate covariates in the pathway between the exposure and the outcome can also act as confounding
covariates. Using substantive prior knowledge, we began by drawing a directed acyclic graph (DAG) to
represent the causal relationships between the selected variables at all visits.10 The main objective in building
the DAG was to identify sets of variables that could be used to eliminate confounding. The inclusion or exclusion
of arrows between variables and their directionality was carefully decided based on prior knowledge in the
scientific literature. For example, previous research supports that a low socioeconomic status increases the risk
of smoking.11 We have thus drawn an arrow from Employment, as a proxy of socioeconomic status, to Smoking.
Moreover, previous research has shown that socioeconomic status and physical activity influence BMI,12 hence we
have drawn arrows from Employment and Physical activity to BMI.
3.1
Assessing the fit of and improving the initial DAG
We verified whether or not our proposed DAG fit the data well using structural equation models (SEMs). SEMs
are statistical models that combine qualitative cause–effect assumptions with data to test causal models and
estimate causal relationships. Most current SEM packages assume linear relationships between variables and
multivariate normality of the data. We used the Lavaan package in R to fit the SEMs.13,14 The multivariate
Talbot et al.
3
normality assumption is untenable in our case, since many of our variables are not continuous (e.g., Smoking and
Employment), hence we assessed the goodness-of-fit of our proposed causal models with Bollen-Stine bootstrap,15
a statistical test that is robust to non-normality of data.
We note, however, that we were partially restrained in our ability to test the proposed DAG. For instance, only
subjects without any missing data at any visits can be included in the SEMs when using the Bollen-Stine bootstrap
in Lavaan v0.5-20. Despite these limitations, we believed that any input we could get from the data to assess the
correctness of our initial DAG was valuable.
Descriptive statistics showed that the correlation between SBP and DBP was large at Visits 1 and 2 (r ¼ 0.77)
and relatively large at Visit 3 (r ¼ 0.54). Because of this, and since we intended to investigate the effect of physical
activity on SBP and DBP separately, we decided to fit separate SEMs for SBP and DBP, hence avoiding the
possible complications associated with fitting a model containing highly correlated variables.16 Also, because the
number of available subjects is largest at Visit 1 and smallest at Visit 3, we took full advantage of the available
information by sequentially fitting larger and larger models. We began by fitting SEMs that only involved the
relationships between the variables at Visit 1, then we fit SEMs for Visits 1 and 2, and lastly, SEMs for Visits 1, 2
and 3. Thus, we tested a total of six SEMs (1: SBP Visit 1; 2: DBP Visit 1; 3: SBP Visits 1 and 2; 4: DBP Visits 1
and 2; 5: SBP Visits 1, 2 and 3; 6: DBP Visits 1, 2 and 3).
The initial DAG we had proposed did not fit the data well according to the chi-square statistics from the six
SEMs. This chi-square statistic tests whether the observed data could be compatible with the proposed DAG by
comparing the observed covariance matrix of the variables in the SEM with the covariance matrix that is generated
by the SEM. Because the fits of the SEMs were poor, we included additional causal links (cause–effect paths and
unobserved common causes) between the variables. We used modification indices as pointers toward sections of
the DAG, where the fit was particularly poor. A modification index represents the expected improvement in the
chi-square statistic that would occur if a causal link were added to an SEM. For example, our initial DAG did not
include any direct connections between variables at Visit 1 and variables at Visit 3, because we believed that the
delay between these two time points was long enough to preclude any direct effect. However, modification indices
suggested our initial intuition was wrong and we decided to include such direct connections. Of note, the decision
to include or not an additional link and which link to add in order to improve the fit was based on substantive
knowledge. In other words, although we used the data to pinpoint lacks of fit in the DAG, the modifications were
not made in a purely data-driven fashion. For instance, one prior hypothesis was that the DAG should have the
same core structure at all visits. That is, we believed that there was no reason for the variables that were connected
together, or for the directionality of the connections, to vary from one visit to another. Similarly, we saw no reason
for the connections between the same variables in the SEMs for SBP and DBP to differ; as such, it was decided that
the SEMs should have exactly the same structure.
All final SEMs, except the one for SBP at Visits 1, 2 and 3, had non-significant chi-square statistics (p > 0.05).
Despite the modifications we made, the final SEM for SBP at Visits 1, 2 and 3 still had a slightly significant chisquare statistics (p ¼ 0.044). We could find no further modifications to the SEMs that made sense from a
theoretical point of view. We therefore investigated if some observations were highly influential in the
calculation of the chi-square statistic. To do so, we repeatedly fitted the SEM for SBP at Visits 1, 2 and 3,
removing one observation at a time. We found two observations that were particularly influential in the chisquare statistic calculation. Fitting the model without these observations yielded a non-significant chi-square
statistic (p ¼ 0.061). One of these observations had a relatively extreme value for SBP at Visit 3 (221 mmHg) in
addition to having a somewhat unusual combination of the values of the variables (e.g. very high BP at all three
visits, but never taking anti-hypertensive medication). We could not find anything peculiar about the other
observation by simply inspecting its values. In the end, our SEMs appeared to be a reasonable representation
of the causal process between the selected variables. Using the six final SEMs, we updated our initial DAG.
Figure 1 presents a part of the final DAG, showing nodes at Visit 1 only. The nodes for SBP and DBP have been
joined into a single BP node in Figure 1 to simplify the presentation. The structural equations encoded in the
complete final DAG are detailed in online Appendix A.
3.2
Identifying confounding variables
If a time-varying confounding variable is on the causal pathway between the exposure and the outcome, direct
adjustment for this confounding variable in an outcome model can lead to biased estimates.1 The complete final
DAG obtained in the previous section confirmed that we were in the presence of such time-varying confounding
variables. For instance, BMI at Visit 1 confounds the relationship between Physical activity at Visit 2 and BP at
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Statistical Methods in Medical Research 0(0)
Physical activity
Hypertens. med.
Age
Employment
Blood pressure
Smoking
BMI
Figure 1. A close-up of the final DAG at Visit 1. Solid arrows represent putative cause-to-effect relationships. Double-headed
dashed arrows between two variables are a notational shortcut to represent hypothesized common causes between these variables.
Visit 2 (Physical activity at Visit 2
BMI at Visit 1 !BP at Visit 2), and BMI at Visit 1 is also an effect of
Physical activity at Visit 1 (Physical activity at Visit 1 ! BMI at Visit 1).
On the basis of a causal DAG, Pearl’s back-door criterion provides sufficient conditions to identify sets of
variables that eliminate confounding when estimating the causal effect of an exposure variable on an outcome
variable.8 In the next two sections, we present the MSMs we used to estimate the causal effects of interest.
As subsequently detailed, Pearl’s back-door criterion was invoked to identify sets of covariates sufficient to
satisfy the sequential randomization assumption underlying the MSM analyses.
4 Marginal structural models for repeated measures
In this section, we describe the MSMRMs used to estimate the causal effects of physical activity on current SBP
and DBP. In the sequel, we generically explain the modeling process in terms of BP, since it is the same for both
SBP and DBP. To simplify the presentation, we proceed for now as if all subjects were observed at every visit.
We first introduce some notations for MSMs. Our notation is very similar to that in Hernán et al.,2 but
eliminates the reference to counterfactual outcomes to accommodate the causal graphical framework we
consider. Let i ¼ 1, . . . , n denote the individuals, Y(t) be the random variable representing the BP value at Visit
t ¼ 1, 2, 3, and X(t) be the random variable representing the Physical activity level at Visit t (X(t) ¼ 1 denotes
moderate activity or more, whereas X(t) ¼ 0 denotes less than moderate activity).
We modeled the effect of current and prior physical activity history on current BP as a function of current
physical activity (recall the long delay between Visit 2 and Visit 3). We thus considered the following model
E½YðtÞ ¼ 0 þ 1 XðtÞ þ 2 t
ð1Þ
where 0 is the unknown intercept, 1 is the unknown parameter associated with the physical activity level and 2 is
the unknown slope parameter associated with the visit. It is common in MSMRMs to introduce a parameter
associated with t, the visit number (for instance, see Hernán et al.2). In equation (1), this parameter allows the
intercept of BP to vary with visits.
Ignoring the complications arising from missing data and possible informative censoring, the parameters of
model (1) can be directly estimated by fitting a GEE regression to an augmented dataset, where each row
corresponds to a given subject at a given visit. However, for 1 to have a causal interpretation, time-dependent
confounding must be adequately dealt with. This is done by attributing an inverse probability of treatment weight
(IPTW) to each subject-visit.
Talbot et al.
5
As will be subsequently seen in equation (3), sets of variables LXY ðtÞ, t ¼ 1, 2, 3, were used to calculate the
subject-specific IPTWs. Let yi ðtÞ, xi ðtÞ and liXY ðtÞ be the observed realizations of Y(t), X(t) and LXY ðtÞ for subject i,
respectively. In the counterfactual framework, the variables LXY entering the weights’ models are chosen so that
the sequential (conditional) randomization assumption holds.2 Because model (1) only depends on the most recent
exposure, this assumption can be simplified to
Yx ðtÞ??XðtÞjLXY ðtÞ,
t 2 f1, 2, 3g
8x,
ð2Þ
where Yx ðtÞ is the counterfactual BP value at Visit t that would have been observed if, possibly contrary to the fact,
the physical activity history x had been observed. Considering Theorem 4.4.1 from Pearl, Section 4.4.3,8 we find
that the effect of X(t) on Y(t) can be identified conditional on LXY ðtÞ if LXY ðtÞ is a set of non-descendants of X(t)
that blocks every back-door path from X(t) to Y(t). Hence, on the basis of the complete final DAG mentioned in
Section 3, the variables we selected in LXY ðtÞ satisfied the back-door criterion. A complete list of the variables in
LXY is available in online Appendix B.
We considered the weighted GEE regression model (1) with stabilized weights
WXY
i ðtÞ ¼
Y
PðXðkÞ ¼ xi ðkÞÞ
PðXðkÞ
¼
xi ðkÞjLXY ðkÞ ¼ liXY ðkÞÞ
kt,k2f1,2,3g
ð3Þ
and estimated PðXðkÞ ¼ xi ðkÞÞ and PðXðkÞ ¼ xi ðkÞjLXY ðkÞ ¼ liXY ðkÞÞ using logistic regression.17
Before turning to the estimation with incomplete data, we discuss how confounding covariates could have been
selected using a DAG if the outcome had depended on the complete exposure history in the postulated outcome
model, instead of depending only on the most recent exposure as in model (1). In such a case, the following
sequential randomization assumption would need to be met for each k t
1Þ, LXY ðk, tÞg,
fYx ðtÞ??XðkÞjXðk
t 2 f1, 2, 3g
8x,
ð4Þ
1Þ represents the physical activity history up to, and including, Visit k 1 (Xð0Þ
where Xðk
is defined as the
XY
empty set, ). The effect of XðtÞ on Y(t) is identified if the sets L ðk, tÞ meet the sequential back-door criterion.8
More precisely, (1) LXY ðk, tÞ must consist of non-descendants of fXðkÞ, . . . , XðtÞg and (2) all paths between X(k) and
1Þg in the modified DAG obtained by removing from the original DAG
Y(t) must be blocked by fLXY ðk, tÞ, Xðk
all arrows pointing into X(k) and all arrows emerging from nodes fXðk þ 1Þ, . . . , XðtÞg.
4.1
Estimation with incomplete data
Up until now, we have presented the MSMRMs we would have fit to estimate the effect of physical activity on BP
had there been no deaths or losses to follow-up. Recall that the HHP is a longitudinal study that spanned over a
very long period of time (from 1965 until 1993). Inevitably, many subjects died before the end of the study
(n ¼ 3,676) or were lost to follow-up (n ¼ 485). Therefore, we did not have a complete dataset where every
subject participated at every visit. Because a weighting scheme is already used to account for confounding, it
was convenient to employ inverse probability of censoring weights (IPCWs) to deal with incomplete follow-up in
our MSMRMs.2,18
Let C(t) be a random variable representing the censoring at Visit t, with Cð0Þ 0, and let ci ðtÞ be the observed
realization for subject i (ci ðtÞ ¼ 0 if subject i is still in the study at Visit t and ci ðtÞ ¼ 1 otherwise). Also, let ZðtÞ
denote all the covariates available at Visit t and zi ðtÞ be their observed values for subject i. Our weights for
censoring are
Y
PðCðkÞ ¼ 0jCðk 1Þ ¼ 0Þ
WC
i ðtÞ ¼
PðCðkÞ
¼ 0jCðk 1Þ ¼ 0, ZðkÞ ¼ zi ðkÞÞ
kt,k2f1,2,3g
We estimated PðCðkÞ ¼ 0jCðk 1Þ ¼ 0Þ and PðCðkÞ ¼ 0jCðk 1Þ ¼ 0, ZðkÞ ¼ zi ðkÞÞ using logistic regression.
XY
For i ¼ 1, . . . , n, we computed the total weights as WTotal
ðtÞ ¼ WC
i
i ðtÞ Wi ðtÞ, and then calculated the
Total
corresponding normalized weights NWi ðtÞ as described in equation (4) in Xiao et al. (2014).4 Finally, the
GEE regression (1) was fit with weights NWTotal
ðtÞ. It has been shown that bias might be introduced when
i
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Statistical Methods in Medical Research 0(0)
using a non-independent working correlation in conjunction with occasion-specific weights, such as ours.19,20 We
therefore used an independent working correlation matrix and a robust variance estimator to account for the
repeated measures in the GEE regression.
4.2
Conditional marginal structural models for repeated measures
It is usually recommended not to include time-varying variables in the outcome model (1) of an MSMRM.2 This is
because some of these variables can act both as confounders and intermediate variables over time.1 In this section,
we present a conditional MSMRM and argue that its specification is valid. More precisely, we suggest that it is
correct to include time-varying variables UðtÞ in the model we consider, even if UðtÞ includes such time-dependent
confounders.
We considered the following conditional model to estimate the causal effect of physical activity on BP
E½YðtÞjUðtÞ ¼ 0 þ 1 XðtÞ þ 2 t þ b3 UðtÞ
ð5Þ
where b3 is a vector of unknown parameters. With the back-door criterion in mind, the variables UðtÞ we selected
were such that they were not descendants of X(t) according to our complete final DAG, and that all back-door
paths between X(t) and Y(t) remained blocked after conditioning on U(t). These variables are Age, Employment
and Smoking at Visit t. Note that UðtÞ may have included variables on the causal pathway between X(s) and Y(t),
s < t, without introducing bias in the estimation of 1. This is because model (5) only considers the effect of X(t) on
Y(t).
We estimated the corresponding causal effect of physical activity on BP as presented in Section 4.1. That is, we
built an augmented dataset and fit the weighted GEE regression model (5) using the same normalized weights as
before. In online Appendix C, we present a simulation study that validates our methodology. The results of this
simulation are briefly discussed in Section 5.2.
5 Analyses and results
5.1 Contrasting our approach with a naive approach
In this paper, we have proposed a graphical approach to MSMs where the covariates selected for estimating the
IPTWs are identified using a DAG and the back-door criterion. A more naive approach for estimating the IPTWs
is to use every potentially confounding covariates available at a given visit.
The first line of Table 1 presents the results obtained by estimating the causal effects of physical activity on SBP
and DBP using the unconditional MSMRM described in Section 4, equation (5). For the naive approach, the
causal effects were estimated similarly, only replacing LXY ðtÞ by LXY
N ðtÞ in the IPTWs (3). The variables in
LXY
N ðtÞ, t ¼ 1, 2, 3, are listed in online Appendix B. The results obtained using the naive approach are presented
in the second line of Table 1.
The estimated causal effects of physical activity on SBP obtained with the naive and the graphical approaches
are both compatible with a decrease in SBP when physically active. However, the interpretation of the results for
DBP differs. Indeed, the results obtained using the graphical approach are compatible with no effect of physical
activity on DBP, whereas the results pertaining to the naive approach suggest that being physically active increases
DBP. That physical activity would increase DBP is not supported by the current scientific knowledge.21 The
observed divergence in conclusions lends support to our proposed approach.
Table 1. Results from the graphical and naive approaches to estimate the causal effects of current physical
activity on SBP and DBP in mmHg (95% confidence intervals in parentheses).
Approach
SBP
DBP
Graphical
Naive
2.01 (2.98, 1.04), p < 0.01
1.19 (2.17, 0.22), p ¼ 0.02
0.27 (0.22, 0.75), p ¼ 0.28
0.93 (0.44, 1.41), p < 0.01
DBP: diastolic blood pressure; SBP: systolic blood pressure.
Talbot et al.
7
Table 2. Results from using unconditional and conditional MSMRMs to estimate the causal effects of physical activity on SBP and DBP
(95% confidence intervals in parentheses).
Parameter
Unconditional SBP
Conditional SBP
Physical activity
Age
Employed
Current smoker
Previous smoker
Physical activity
Age
Employed
Current smoker
Previous smoker
–2.01 (–2.98, –1.04), p < 0.01
NA
NA
NA
NA
0.27 (0.22, 0.75), p ¼ 0.28
NA
NA
NA
NA
–1.48 (–2.42, –0.55), p < 0.01
0.55 (0.47, 0.63), p < 0.01
–8.25 (–9.34, –7.15), p < 0.01
–0.65 (–1.66, 0.35), p ¼ 0.20
1.17 (0.13, 2.20), p ¼ 0.03
0.20 (0.29, 0.68), p ¼ 0.43
–0.05 (–0.09, 0.00), p ¼ 0.03
1.71 (1.23, 2.18), p < 0.01
–1.80 (–2.35, –1.26), p < 0.01
–0.24 (0.80, 0.31), p ¼ 0.39
DBP: diastolic blood pressure; SBP: systolic blood pressure.
Note: Only the parameter associated with physical activity has a causal interpretation.
5.2
Comparing conditional and unconditional MSMRMs
The results of the simulation study that investigated the performance of conditional MSMRMs suggest that such a
type of MSMRMs yields unbiased and more precise estimates in some situations (see online Appendix C).
Moreover, the conditional MSMRM produced less biased estimators of the causal effect than unconditional
MSMRM when the weights’ models were incorrectly specified. We then compared the estimates obtained using
the unconditional MSMRM (1) and the conditional MSMRM (5) for the HHP data. The conditional MSMRM
adjusts for the time-varying covariates UðtÞ ¼ fAge, Employment and Smoking at Visit tg. The results obtained
from these conditional and unconditional MSMRMs are in agreement (see Table 2). No clear benefit was seen
with the use of a conditional MSMRM for this application.
6 Discussion
Using the HHP to illustrate our approach, we have devised and implemented MSMs in the graphical framework to
causal inference. This graphical framework can be particularly helpful when selecting variables used to construct
the IPTWs, which are central to fitting MSMs to data. Using substantive prior knowledge, our approach first
consisted of drawing a DAG to represent the links between the selected clinically relevant and potentially
confounding variables. Structural equation models were then used to assess the correctness of the postulated
DAG and to improve this DAG. The last step was to identify the confounding variables upon the examination
of the final DAG and by invoking Pearl’s back-door criterion.
Selecting variables to calculate IPTWs has previously been recognized as a challenge in the implementation of
MSMs.5 This was further illustrated in our paper, where a naive approach to variable selection was shown to yield
implausible results. Contra to this, the graphical approach we developed for the analysis of the HHP data gave
results more consistent with the current scientific knowledge.
We note that it is common in the SEM field to use approximate fit indices, such as the root-mean-square of
error approximation (RMSEA) or the comparative fit index (CFI), in addition to, or instead of, the chi-square test
to measure the fit of a SEM to the data. In fact, it is sometimes argued that the chi-square test of fit for SEMs is
nearly always significant when the sample size is large enough because it has the ability to detect very small
inconsistencies between the observed covariance matrix and the model-generated covariance matrix. Fit indices
whose values are independent of sample size have therefore been introduced as a solution to this apparent
problem. However, it has been remarked that even small differences between the observed and the modelgenerated covariance matrices might be a sign of serious causal misspecifications of the model.22,23 Therefore,
although it would have been possible to assess the fit of our SEMs utilizing approximate fit indices, we believe that
the chi-square test was more appropriate in our causal inference context.
A word of caution regarding our methodology is also in order. By using the data for modifying the initial DAG,
there is a risk of overfitting. That is, there is a risk that connections between some variables would be observed in
the data due to chance alone and would not represent a true association in the population. A DAG that would be
altered by blindly following the changes suggested by modification indices might turn out to include too many or
8
Statistical Methods in Medical Research 0(0)
incorrect pathways. We believe that this risk has been mitigated by using modification indices in conjunction with
substantive knowledge in order to make the best final decision regarding how to improve the fit of our DAG.
We also proposed a conditional version of the MSMRMs to estimate the causal effects of physical activity on
SBP and DBP. Although no clear advantages were seen for the HHP data, the use of conditional MSMRMs ought
not to be neglected in practice. Indeed, the simulation we performed resulted in unbiased conditional estimators
with smaller standard errors than the unconditional ones. We also observed that conditional MSMRMs offer some
protection to the bias that would otherwise result from a misspecification of the weights’ models. It is important to
keep in mind that our conditional MSMRMs were fit in a very specific context in which the physical activity
history was summarized using only the most recent level of physical activity. Our approach could, however, be
easily generalized to other situations, for instance where physical activity history is summarized using the two most
recent levels of physical activity. Following a reasoning similar to the one presented in Section 4.2, one would
select the variables used for conditioning in the structural model utilizing the back-door criterion to ensure that the
conditioning does not introduce bias in the estimation of the causal parameters.
Declaration of Conflicting Interests
The author(s) declared no potential conflicts of interest with respect to the research, authorship, and/or publication of this
article.
Funding
The author(s) disclosed receipt of the following financial support for the research, authorship, and/or publication of this article:
Talbot has been supported by doctoral scholarships from the Natural Sciences and Engineering Research Council of Canada
and the Fonds de recherche du Québec: Nature et Technologies. Rossi is supported by the Canadian Institutes of Health
Research Vanier Canada Graduate Scholarship, and Fonds de la recherche du Québec-Santé Bourse de formation Doctorat.
Lefebvre is supported by the National Sciences and Engineering Research Council of Canada and is a Chercheur-Boursier of
the Fonds de recherche Québec – Santé. Atherton is supported by the National Sciences and Engineering Research Council of
Canada. Bacon is supported by the Fonds de la recherche du Québec – Santé Chercheur-Boursier and received personal fees
from Kataka Medical Communication during the conduct of the study outside the submitted work; and is Chair of the
Canadian Hypertension Education Programme’s Recommendations Task Force Health Behaviours Sub-committee, which
deals with generating recommendations about the role of health behaviours in the prevention and treatment of
hypertension. The Honolulu Heart Program was sponsored by the National Heart, Lung, and Blood Institute (NHLBI).
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