Topics: ● ● ● ● ● ● ● 3. Chromosomal mutations. These mutations involve changes to the structure or number of chromosomes. Examples include deletions, duplications, inversions, and translocations. Introduction to mutations Types of mutations Effects of mutations Mutagens Human genetic disorders Evolution and mutations Biotechnology and mutations Introduction to Mutations Causes of mutations Mutations can be caused by a variety of factors, including: 1. Spontaneous errors during DNA replication. The DNA replication process is not perfect, and errors can occur spontaneously. These errors can result in a change in the DNA sequence, leading to a mutation. 2. Environmental factors. Exposure to certain environmental factors such as radiation, chemicals, and viruses can cause mutations in DNA. For example, ultraviolet (UV) radiation from the sun can cause mutations that lead to skin cancer. 3. Inherited mutations. Mutations can also be inherited from parents. When mutations occur in the germ cells (sperm and egg cells), they can be passed down to offspring and can cause genetic disorders. 4. Replication errors during cell division. During cell division, DNA is replicated and distributed to the daughter cells. Errors during this process can result in mutations. 5. Mutagenic agents. Some chemicals and substances, known as mutagens, can cause mutations in DNA. Examples of mutagens include tobacco smoke, certain pesticides, and industrial chemicals. A mutation is a change in the DNA sequence that can occur spontaneously or be caused by exposure to certain environmental factors known as mutagens. Mutations can occur in any cell of an organism and can be inherited or arise spontaneously during an individual's lifetime. A gene mutation is a change in the DNA sequence that makes up a gene. This can result in a change in the amino acid sequence of a protein, which can affect the protein's function. Gene mutations can occur naturally or be caused by environmental factors such as radiation, chemicals, or viruses. Types of mutations 6. DNA damage repair errors. Cells have mechanisms to repair damaged DNA, but errors in these mechanisms can lead to mutations. 7. Insertions and deletions. These mutations involve the addition or removal of one or more nucleotides in the DNA sequence, which can alter the reading frame and change the amino acid sequence of the protein. Gene mutations can affect an organism differently depending on the specific mutation and its location within the genome. Some mutations may have no effect, while others can lead to genetic disorders or an increased risk of developing certain diseases. 1. Point mutations. These are the most common type of mutation, and they involve a change in a single nucleotide (A, T, C, or G) in the DNA sequence. Point mutations are divided into three categories: ● Silent mutations. These mutations do not change the amino acid sequence of the protein encoded by the DNA because of the redundancy of the genetic code. ● ● Missense mutations. These mutations change one amino acid in the protein sequence. Depending on the location of the mutation, this may or may not affect the protein's function. Nonsense mutations. These mutations change a codon that normally encodes an amino acid into a stop codon, leading to premature termination of protein synthesis. 2. Frameshift mutations. These mutations occur when nucleotides are inserted or deleted from the DNA sequence, causing a shift in the reading frame of the codons. Frameshift mutations can have significant effects on the resulting protein's function. Effects of mutations Mutations can affect an organism's phenotype differently, from neutral to beneficial or harmful. ● Neutral mutations. These mutations have no effect on an organism's phenotype or health. For example, a change in the DNA sequence that does not alter the amino acid sequence of a protein. ● Beneficial mutations. These mutations can provide an advantage to an organism, such as resistance to a disease or an increased ability to survive in a particular environment. ● Harmful mutations. These mutations can cause harm to an organism, such as a genetic disorder or an increased risk of developing cancer. MUTAGENS Mutagens are chemical or physical agents that can cause changes or mutations in the DNA sequence of an organism. These mutations can have a variety of effects, including changes in the organism's traits, genetic disorders, and cancer. Examples of chemical mutagens include: ● Polycyclic aromatic hydrocarbons (PAHs) found in tobacco smoke and charred meat ● Nitrosamines found in processed meats and tobacco smoke ● Benzene, a common industrial chemical ● Aflatoxins produced by fungi in food crops like peanuts and corn ● Vinyl chloride, a chemical used in plastic production Examples of physical mutagens include: ● Ionizing radiation, such as X-rays and gamma rays ● Ultraviolet (UV) radiation from the sun or artificial sources like tanning beds ● Electromagnetic radiation, such as radio waves and microwaves ● High-energy particles, such as those found in cosmic radiation and nuclear fallout Mutagens can cause cancer by inducing mutations in genes that control cell growth and division, leading to uncontrolled cell growth and the formation of tumors. For example, a mutation in the tumor suppressor gene TP53 can prevent cells from properly regulating their own growth, leading to the development of cancer. Some mutagens can also damage DNA directly, leading to the formation of abnormal or damaged proteins that can interfere with normal cellular functions. HUMAN GENETIC DISORDERS Human genetic disorders are caused by mutations in the DNA sequence that can affect the function of genes and proteins. These mutations can be inherited from parents or arise spontaneously during development. 2. Huntington's disease. It is a genetic disorder caused by mutations in the HTT gene, which codes for a protein called huntingtin. Mutations in HTT can cause the accumulation of abnormal proteins in the brain, leading to the progressive degeneration of nerve cells and cognitive decline. 3. Sickle cell anemia. It is a genetic disorder caused by mutations in the HBB gene, which codes for the beta-globin subunit of hemoglobin, a protein that carries oxygen in red blood cells. Mutations in HBB can cause the formation of abnormal hemoglobin molecules, leading to the characteristic sickle shape of red blood cells and anemia. 4. Cri du chat Syndrome. It is a genetic disorder caused by a deletion of a portion of chromosome 5 causes it. This deletion can affect gene expression in brain development, leading to intellectual disability and delayed development. It can also affect the development of the larynx, resulting in a high-pitched cry that sounds like a cat. 5. Down syndrome. It is a genetic disorder caused by an extra copy of chromosome 21. This extra chromosome can lead to overexpression of genes on chromosome 21, affecting the development of the brain, heart, and other organs. The characteristic facial features of Down syndrome may be due to altered gene expression during facial development. 6. Edward syndrome. It is a genetic disorder (Trisomy 18) caused by the presence of an extra copy of chromosome 18. This extra chromosome can disrupt normal development, leading to severe intellectual disability and physical abnormalities. Many of the features of Edward syndrome are thought to be due to the dysregulation of genes on chromosome 18. 1. Cystic fibrosis. It is a genetic disorder caused by mutations in the CFTR gene, which codes for a protein that regulates the movement of salt and water in and out of cells. Mutations in CFTR can lead to the buildup of thick mucus in the lungs and other organs, causing respiratory and digestive problems. 7. Jacobsen syndrome. It is a genetic disorder caused by deleting a portion of chromosome 11. This deletion can affect gene expression in brain development, leading to intellectual disability and delayed development. It can also affect the heart's and other organs' development, resulting in physical abnormalities. 8. Klinefelter syndrome. It is a genetic disorder caused by the presence of an extra X chromosome in males. This extra chromosome can affect the production of testosterone, leading to reduced levels of this hormone and infertility. The physical and developmental features of Klinefelter syndrome may be due to altered gene expression resulting from the extra X chromosome. 9. Turner syndrome. It is a genetic disorder caused by the absence of all or part of one X chromosome in females. This missing chromosome can affect the development of the ovaries and other organs, leading to infertility and physical abnormalities such as short stature. The characteristic features of Turner syndrome may be due to altered gene expression resulting from the missing X chromosome. Human karyotyping is the process of analyzing the number, size, and shape of chromosomes in a person's cells. Chromosomes are structures that contain an individual's genetic material in the form of DNA. Humans have 23 pairs of chromosomes, for a total of 46 chromosomes Genetic testing and counseling can help individuals and families understand their risk of developing or passing on genetic disorders. Genetic testing involves analyzing a person's DNA to detect mutations or other genetic variations that may increase the risk of a particular disorder. EVOLUTION AND MUTATION Karyotyping is typically done using cells from a blood sample, although other types of cells, such as skin cells or amniotic fluid cells, may also be used. The cells are first treated with a chemical that stops them in the dividing stage of the cell cycle. Then, the cells are stained with a dye that highlights the chromosomes and allows them to be visualized under a microscope. Mutations are the ultimate sources of genetic variation, which is the raw material for evolution. Mutations can lead to evolution by introducing new genetic traits into a population. Over time, natural selection can act on these traits, leading to changes in the genetic makeup of the population. When a mutation occurs, it can create a new allele (a variant form of a gene) that was not previously present in the population. This can increase genetic variation within the population. If this new allele confers a beneficial trait, individuals carrying that allele may be more likely to survive and reproduce, passing the beneficial trait to their offspring. This process is called natural selection, and it can lead to the spread of the advantageous allele in the population. On the other hand, if a mutation creates a harmful allele, individuals carrying that allele may be less likely to survive and reproduce. This can lead to the removal of the deleterious allele from the population over time through a process called negative selection. The chromosomes are then arranged in pairs according to their size, shape, and banding patterns, numbered from 1 to 22 based on their size (with chromosome 1 being the largest) and labeled X and Y for the sex chromosomes. Normal human karyotype should show 23 pairs of chromosomes, with the sex chromosomes being either XX (female) or XY (male). Karyotyping can be used to detect chromosomal abnormalities, such as aneuploidy (an abnormal number of chromosomes), or structural abnormalities, like translocations, deletions, or duplications. This can be helpful in diagnosing genetic disorders like Down syndrome, Turner syndrome, or Klinefelter syndrome. ● Translocations occur when a piece of one chromosome breaks off and attaches to another chromosome. This can result in a change in the position of certain genes, which can affect their expression and potentially lead to genetic disorders. ● Deletions occur when a portion of a chromosome is missing, either due to a break in the chromosome or failure of a chromosome to separate properly during cell division. Deletions can range in size from small to very large and can lead to a variety of genetic disorders, depending on which genes are affected. ● Duplications occur when a section of a chromosome is duplicated, resulting in an extra copy of that segment. Duplications can be inherited from a parent or can occur spontaneously during cell division. Like deletions, duplications can range in size and can have varying effects on gene expression and development. Genetic variation is important for evolution because it provides the raw material for natural selection to act upon. Without genetic variation, natural selection would not be able to favor certain traits over others, and evolution would not occur. A dominant gene is a gene that expresses its phenotype (observable trait) when present in either one or both copies of the gene. A recessive gene is a gene that expresses its phenotype only when present in both copies of the gene. BIOTECHNOLOGY AND MUTATION Biotechnology is the application of technology to study, manipulate and modify biological systems, including living organisms, cells, and molecules. One of the major areas of biotechnology is genetic engineering, which involves modifying the genetic material of living organisms to produce new products or improve existing ones. HUMAN KARYOTYPING GENETIC ENGINEERING Genetic engineering is the process of manipulating the genetic material of an organism, often by introducing or modifying specific genes. This process can involve introducing new genetic material from a different organism or modifying an organism's existing DNA to produce a desired trait or characteristic. For example, scientists can use gene editing technologies like CRISPR-Cas9 to precisely target and modify specific genes in an organism's DNA, introducing or removing mutations in the process. This can be used to create new crop varieties that are more resistant to pests or environmental stresses or to develop new treatments for genetic diseases by correcting specific mutations that cause the disease. Genetic engineering relies on the ability to manipulate DNA, which can be achieved through a number of techniques, including CRISPR-Cas9 technology, gene therapy, and others. CRISPR-Cas9 technology is a powerful tool that enables scientists to precisely target and edit specific genes within an organism's DNA, allowing for the creation of genetically modified organisms with desirable traits or the correction of genetic disorders. Gene therapy is another form of genetic engineering that involves the delivery of functional copies of genes into cells to correct genetic defects or diseases. This technology is still in its early stages, but it holds promise for treating a variety of genetic disorders, such as cystic fibrosis, muscular dystrophy, and sickle cell anemia. Recombinant DNA (rDNA) is a type of DNA that is artificially created by combining DNA molecules from different sources. This technology involves the use of enzymes called restriction endonucleases to cut DNA molecules at specific locations, allowing for the insertion of new DNA sequences from other sources helps them understand the concept of gene mutation and its implications. CHECK YOUR UNDERSTANDING: Name: __________________________ Grade and Section: _______________ Test 1. Complete the following table: DNA ACT CTG AAT TAA CTA coding DNA template mRNA tRNA Amino Acid ATG GGT 3. A DNA strand that originally reads 5’-GATATC-3’ undergoes a mutation that changes it to 5’- GATCATC-3’. This is an example of what type of mutation? A. Deletion B. Insertion C. Nonsense mutation D. Point mutation 4. What type of point mutation results in a frameshift mutation? A. Deletion B. Insertion C. Substitution D. Both A and B 5. Which is NOT a type of substitution mutation? A. Conservation B. Missense C. Nonsense D. Silent 6. Which is an example of a stop codon in RNA? A. UAG B. UAA C. UGA D. All of the above 7. Which type of mutations can result in a frameshift? A. Nonsense and missense B. Nonsense and insertions C. Insertions and deletions D. Missense and deletions 8. Which type of mutation does NOT change the overall function of the protein? A. Insertion B. Missense C. Nonsense D. Silent 9. Which type of mutation results in the replacement of one nucleotide by another? A. Insertion B. Missense C. Nonsense D. Silent 10. Which of the following is not an example of a point mutation? A. Frameshift mutation B. Missense mutation C. Nonsense mutation D. Silent mutation TEST 3. Match the following DNA coding DNA template mRNA tRNA Amino Acid CTG CGA ATA TCA CAA ATC GGT TEST 2. Encircle the letter of the correct answer 1. Frameshift Mutations are generally much more serious and often more deadly than point mutations. A. True B. False C. Depends upon the condition of the DNA D. It is much more serious but not deadly 2. Frameshift mutations are the result of what occurrence? A. Insertions or deletions that are not a multiple of three. B. A mutation that changes an amino acid codon to a stop codon C. A mutation that changes one amino acid to another. D. A nucleotide-pair substitution