GENETICS 1 LEVELS OF ORGANIZATION TO LIFE Nonliving Levels 1. Atom (elements) 2. Molecule (compounds like carbohydrates and proteins) 3. Organelles (parts of the cell: nucleus, cytoplasm, etc…) 2 LEVELS OF ORGANIZATION TO LIFE Living Levels 1. Cell (makes up ALL organisms) 2. Tissue (cells working together) 3. Organ (a group of tissues. Heart, brain, stomach, etc…) 4. Organ System (A group of organs that work together) 5. Organism 3 THE CELL Cells are the basic structure of all living beings, from singlecell bacteria to giant sequoias, flies to elephants, fungi to human organisms. The CELL is the basic unit of life. 4 THE CELL THEORY The cell theory describes the basic properties of all cells. 1. All living things are composed of one or more cells. 2. The cell is the basic unit of life. 3. All new cells arise from existing cells 5 THE STRUCTURE AND FUNCTION OF THE HUMAN CELL MOST cells are so small they can only be observed under a microscope. The average sized human has an estimated 100,000 BILLION cells An optical microscope allows us to distinguish Four cell components: The cell membrane The cytoplasm The nucleus The nuclear membrane 6 THE STRUCTURE AND FUNCTION OF THE HUMAN CELL – GRADE 9 REVIEW 7 THE CELL MEMBRANE The CELL MEMBRANE is a flexible barrier that surrounds the cell contents, allowing the cell to interact with its environment. 8 THE CYTOPLASM The CYTOPLASM is all of the material within the cell membrane and outside the nucleus. The two major components of cytoplasm Cytosol Organelles 9 THE NUCLEUS The NUCLEUS, easily recognizable by its darker colour, is the cell’s control center. It contains a molecule that controls all cell activity: DNA – Deoxyribonucleic Acid 10 THE NUCLEUS 11 THE NUCLEUS – NUCLEAR MEMBRANCE The NUCLEUS, contains and protects individual genetic information. The outer layer of the nucleus is called the NUCLEAR MEMBRANE. Much like the cell membrane it forms a barrier and protects the nucleus and Enables certain exchanges with the rest of the cell 12 ORGANELLES – OTHER CELL STRUCTURES Organelles are structures that enable the cell to live, grow and reproduce 13 MITOCHONDRIA The MITOCHONDRIA converts energy stored in food into usable energy, through cellular respiration It is considered the powerhouse of the cell 14 MITOCHONDRIA GOLGI APPARATUS The GOLGI APPARATUS stores material produced by the cell and transports it to the cell membrane and outside the cell 16 GOLGI APPARATUS 17 ENDOPLASMIC RETICULUM The ENDOPLASMIC RETICULUM produces some of the material necessary for cell activities Transports material from one part of the cell to another. There is rough and smooth ER Rough ER is characterized by the presence of Ribosomes 18 ENDOPLASMIC RETICULUM 19 RIBOSOMES RIBOSOMES produce some of the material necessary for cell activities. They are responsible for making proteins (protein synthesis) 20 RIBOSOMES CYTOSOL CYTOSOL is the gelatinous liquid found inside the cell. produce some of the material necessary for cell activities. The cytoplasmic organelles are within the cytosol. 22 LYSOSOMES Lysosomes contain molecules known as enzymes that help digest materials brought into the cell. They also help breakdown and recycle organelles. 23 LYSOSOMES FACTORS RESPONSIBLE FOR CHARACTER TRAITS AMONG LIVING ORGANISMS •The similarities and difference amongst a species are known as CHARACTER TRAITS. •Character traits are the physical, psychological and physiological attributes that vary from individual to individual. •How is it that individual have different character traits? fere A LOOK INSIDE THE NUCLEUS CHROMOSOMES • Most eukaryotic cells contain a nucleus holding a person’s basic genetic information. • The main component of the nucleus is CHROMATIN, made up of a molecule of DNA, combined with PROTEINS. • CHROMATIN is a mass of DNA and proteins within the nucleus of most cells not undergoing division. When the cells are about to divide, chromatin contracts forming visible rods called CHROMOSOMES CHROMOSOMES Is the DNA in the nucleus just free floating all over the place? YES AND NO! Each DNA molecule inside the nucleus is partially uncoiled. HOWEVER! During cell division, the DNA becomes compact and forms into CHROMOSOMES A CHROMOSOME is a that is formed when chromatin contracts. It is visible under the microscope. 29 CHROMOSOMES The nucleus of each human cell (except for red blood cells and reproductive cells (sperm and ova)) contains 23 PAIRS of CHROMOSOMES. 23 PAIRS = 46 chromosomes. Where do we get our chromosomes from? In EACH PAIR of chromosomes, one comes from your mother and the other from your father. 22 pairs are made up of homologous (similar) chromosomes in both males and females. They share a similar size and shape The 23rd pair is the SEX CHROMOSOME 30 CHROMOSOMES KARYOTYPE: is an ordered representation of an individual’s chromosomes, obtained by grouping them into pairs according to SIZE. NOTICE the 23rd Chromosome difference between males and females Females have TWO “X” chromosomes Males have ONE ”X” chromosome and ONE “Y” chromosome. 31 DNA AND GENETIC MATERIAL The nucleus contains the cell’s genetic material, which is responsible in part for our physical appearance. This genetic material also contains all the necessary instructions for the cell to function properly. The instructions for the manufacturing of substances the cell needs to produce for life. 32 CHROMOSOMES The number of chromosomes varies between different species and the more one has, does not mean complexity 33 Number of Chromosomes 34 SEX CHROMOSOMES • Normally, only one pair can contain chromosomes of different sizes, the pair of SEX CHROMOSOMES. • As with most animals, two sex chromosomes are the same for females (XX pair), while in the male, one of the two chromosomes is smaller (XY pair). THE NUCLEUS – REVISITED! The NUCLEUS, easily recognizable by its darker colour, is the cell’s control center. It contains a molecule that controls all cell activity: DNA – Deoxyribonucleic Acid 36 DNA D e ox y r i b o nu c l e i c A c i d Found inside the cell nucleus in long chains that are coiled like telephone cord to form a DOUBLE HELIX. It consists of a series of chemical units called nucleotides. Every cell in your body has the same DNA, with few exception. Red Blood Cells being an exception since they do not contain a nucleus. DNA forms the basis of life on Earth. DNA molecules contain instructions for building every living organism from the tiniest bacterium to a massive blue whale. 37 THE COMPONENTS OF DNA DNA is a long molecule made up of repeating individual units of monomers called nucleotides. Nucleotides are made up of three parts that are held together by bonds: 1. A sugar: DEOXYRIBOSE (sides of the ladder) 2. A PHOSPHATE group (sides of the ladder) 3. One of 4 nitrogenous bases: ADENINE (A), THYMINE (T), GUANINE (G) or CYTOSINE (C) (rungs of ladder) A nucleoside is just the sugar and Nitrogenous base DNA When you uncoil the double helix structure DNA has the appearance of a ladder with millions of rungs. Two chains linked by pairs of molecules (the rungs of the ladder) called (nitrogenous) bases. Adenine (A) Guanine (G) Cytosine (C) Thymine (T) 39 BASE PAIRING Binding of the bases from one side of the ladder to the other is very specific! Adenine (A) ALWAYS binds thymine (T) Guanine (G) ALWAYS binds cytosine (C) Humans have about 3 billion base pairings DNA is made of 2 long strands of nucleotides arranged in a specific way called the “Complementary Rule” 42 STRUCTURE OF DNA Nucleotide Hydrogen bonds Sugar-phosphate backbone Key Adenine (A) Thymine (T) Cytosine (C) Guanine (G) GENES In the discussion of genetics and DNA you most definitely have heard of the term GENE. A GENE is a DNA segment that contains information for making proteins. Genes contain the information for protein making. Proteins determine character traits and body functioning. 45 GENES Our genes are the blueprint for our biology. They contain the instructions for things like the shape of our nose and the size of our feet. It is estimated that we have approximately 25, 000 different genes in our body. Genes code for the manufacturing of proteins in our cells, such as enzymes and hormones that not only aid in the function of the cell, but to also give us our characteristic features. 46 THE GENOME The entire base-pair sequencing in an individual or species makes up the individuals GENOME. A GENOME is the complete set of information It includes all the genetic information that codes our genes but there is also a huge percentage of DNA that does not code for anything! – “JUNK DNA” 47 PROTEINS • A PROTEIN is a molecule that plays a specific role in the functioning of an organism and in the expression of its character traits. • The human body has more than 100,000 proteins each with a specific role. • Genes provide the information to make proteins. • Proteins account for more than 50% of the dry mass in a cell. PROTEIN FUNCTIONS • SUPPORT: Elastin is a protein that make our skin firm yet elastic. • TRANSPORT OF SUBSTANCES: Hemoglobin is a protein that carries O2 in the blood. • IMMUNITY: Antibodies are proteins that protect us from disease. • CONTROL AND MESSAGE RELAY: Hormones are proteins that help make the body develop properly. • CATALYSIS: Enzymes are proteins that speed up biochemical reactions in the body. AMINO ACIDS • Proteins are made up of one or more chains of small units called amino acids. • An AMINO ACID is a molecule that can combine with other amino acids to form proteins. • There are 20 different amino acids. • Some chains are very long, containing 600 amino acids. • Usually proteins have an average of 100-200 amino acids. AMINO ACIDS • The sequence of amino acids determines the shape of the protein. The shape of the protein is the biggest factor that determines its function. PROTEIN SYNTHESIS • PROTEIN SYNTHESIS is the creation of proteins by cells • Usually carried out by the ribosomes PROTEIN SYNTHESIS - RNA • Since DNA cannot leave the nucleus, a messenger must carry the information from the DNA to the ribosomes: RNA (mRNA) • An RNA molecule is very similar to a DNA molecule with a few important differences: DNA RNA Double Stranded Single Stranded Thymine base pair Uracil base pair Sugar is deoxyribose Sugar is ribose TWO TYPES OF RNA • Messenger RNA (mRNA) is the messenger for carrying the instructions from the gene to the ribosome. • Transfer RNA (tRNA) transfers the amino acid in the cell’s cytoplasm to the ribosomes in order to make proteins. DNARNA PROTEIN: AND OVERVIEW OF INFORMATION FLOW IN A CELL • Making a protein from the instructions in the DNA is a two step process: • Transcription • Translationad p.358-359 Process of Protein synthesis PROTEIN SYNTHESIS https://www.youtube.com/watch?v=NJxobgkPE Ao https://www.youtube.com/watch?v=gG7uCskU OrA GENETIC DIVERSITY Every gene that codes for proteins that make you into the individual that you are came from your parents. Every gene can exist in different variations and forms. Example Genes responsible for eye colour can render the eyes blue, green, brown and so on, while the genes for hair colour produce hair that is a particular shade of blond, brown, red, or black. 62 GENETIC DIVERSITY With 25,000 Genes in each of our cells, each with their own variations, it is virtually impossible for two individuals to possess the same genetic information. THE EXCEPTION: Identical Twins GENETIC DIVERSITY is achieved by all the possible genetic variations of a particular specie. 63 GENETIC DIVERSITY Sexual reproduction increases the genetic diversity of a species. You get one copy of a particular gene from EACH parent. Each birth is therefore a new opportunity to combine the genes of two parents Allows for new variations in the population The greater the number of individuals in a population, the greater the genetic diversity INBREEDING! Offspring with members of your family Can lead to a higher expression of a defective gene than one would normally expect. Less genetically diverse! 64 INBREEDING Queen Victoria - Hemophilia – Close intermarriages 65 SICKLE-CELL DISEASE A slight change in primary structure can drastically change the entire shape of the protein. When a protein changes shape, it will not work the same. Sickle-cell anemia is a genetic disease that occurs when red blood cells are shaped like crescents or sickles instead of saucers. Result: Not enough oxygen gets through the body, making the person become tired very easily. • The single gene that is affected changes one single amino acid in the primary structure of hemoglobin. 10 µm Red blood Normal cells are cell shape full of individual hemoglobin molecules, each carrying oxygen. 10 µm Red blood cell shape Fibers of abnormal hemoglobin deform cell into sickle shape. • This affects the secondary structure, which affects the tertiary structure, which affects the quaternary structure. PROTEIN SYNTHESIS THE PROTEIN-MAKING PROCESS Protein Synthesis (Gene Expression) Notes Proteins (Review) Proteins make up all living materials • Proteins are composed of amino acids – there are 20 different amino acids • Different proteins are made by combining these 20 amino acids in different combinations PROTEINS ARE MANUFACTURED (MADE) BY THE RIBOSOMES MAKING PROTEINS STEP 1: TRANSCRIPTION Making a Protein— Transcription First Step: Copying of genetic information DNA to RNA is called Transcription Why? DNA has the genetic code for the protein that needs to be made, but proteins are made by the ribosomes are outside nucleus in the cytoplasm. DNA is too large to leave the nucleus stranded), but RNA can leave the nucleus (single stranded). • Part of DNA temporarily unzips and is used as a template to assemble complementary nucleotides into messenger RNA (mRNA). STEP 1½: RNA EDITING • • An mRNA molecule has to be “edited” in order to be useful. There’s a lot of unnecessary information that needs to be removed. An mRNA sequence that does NOT code for protein is called an interon. A sequence that is useful in making a protein is called an exon. STEP 1½: RNA EDITING DNA transcription pre-RNA (in nucleus) exon 1 interon RNA editing exon 2 interon interon interon RNA (in cytoplasm) exon 1 exon 2 exon 3 exon 3 mRNA then goes through the pores of the nucleus with the DNA code and attaches to the ribosome. MAKING PROTEINS STEP 2: TRANSLATION Making a Protein— Translation Second Step: Decoding of mRNA into a protein is called Translation. Transfer RNA (tRNA) carries amino acids from the cytoplasm the ribosome. These amino acids come from the food we eat. Proteins we eat are broken down into individual amino acids and then simply rearranged into new proteins according to the needs and directions of our DNA. •A series of three adjacent bases in an mRNA molecule codes for a specific amino acid—called a codon. •Each tRNA has 3 nucleotides that are complementary to the codon in mRNA. •Each tRNA codes for a different amino acid. Amino acid Anticodon mRNA carrying the DNA instructions and tRNA carrying amino acids meet in the ribosomes. • Amino acids are joined together to make a protein. Polypeptide = Protein Use one of the codon charts on the next page to find the amino acid sequence coded for by the following mRNA strands. CAC/CCA/UGG/UGA ___________/___________/___________/____________ AUG/AAC/GAC/UAA ___________/___________/___________/____________ CAC/CCA/UGG/UGA ___________/___________/___________/____________ 3rd Base 1st Base 2nd Base AUG/AAC/GAC/UAA ___________/___________/___________/____________ Protein Synthesis