Genes: What are they, how they work, and how are they inherited? Lecture 3 Dr. Maharaj/Dr Gupta What is Heredity? Heredity = the passing on of traits from one generation to the next. Mendel the Father of Genetics and his work • Inheritance of traits – continuity of life forms (genetic continuity) • Yet parents and offspring may not look exactly the same • Current knowledge- chromosomes; genes, units of inheritance; alleles; reductional division 3 Gregor Johann Mendel (1822-1884) •First person to formulate the principles of heredity •As a young man worked as a gardener and attended Philosophical Institute of Olomouc. •1843 Entered Augustinian Abbey of St Thomas in Brno (now Czech republic) •1847 Ordained as a priest •1851-1853 University of Vienna •1853-1865 Experiments with pea crosses in monastery garden 4 1865 His paper “Experiments on Plant Hybridization” presented at the meeting of The Natural History Society of Brünn and published a year later (1866) in The Proceedings of The Natural History Society of Brünn. No one realizes the significance of his findings until 1900. St Thomas Abbey, Brno 5 6 Before Mendel It was known that plants have male and female organs and that flowers need to be fertilized to develop seed. Many domesticated plant and animal varieties were bred to produce desirable traits, but no one did careful analysis of how those traits were passed on from generation to generation. 7 Mendel’s experimental system • Garden Peas: - many varieties - self-fertilizing (subject to experimental cross-fertilisation) - produce lots of seed Simple, elegant experiments: careful choice of sharply contrasting traits (pairs) 8 9 10 Mendel’s approach • Make sure that the varieties used were true breeding (true strains) by selfing them for several generations. • True breeding means that offspring will always exhibit same trait as parent, i.e. parent is homozygous for the trait. • Use of characters that have only 2 discrete alternative traits. Traits did not exhibit continuous variation. 11 The experiment • Cross plants (P) exhibiting different traits (Cross between two parents with contrasting traits) • Follow the trait in offspring (F1) • Self F1 offspring and observe the trait in next generation F2. • Count and analyze data using mathematics. 12 What is a Trait? A trait is a specific characteristic that is unique. Traits affect the way we look Traits affect how our bodies function Traits are inherited • Examples are hair color, eye color, handedness, etc. A gene is a sequence of DNA specifying the sequence of amino acids of a particular protein involved in the expression of a trait. Different forms of the same gene are called alleles. Different alleles produce variations in inherited characteristics (traits). • Modern understanding of these experiments in terms of (homologous) chromosomes, alternative forms of genes for the same trait (alleles), position or location (loci) of genes on chromosomes; and meiosis. • Unknown to Mendel. He used term “factor” 14 • Homozygotes – in a zygote, paired factors (genes) alike on homologous chromosomes (T/T). • Heterozygotes– paired factors (genes) contrasting or different on homologous chromosomes (T/t). 15 1. Monohybrid cross Cross between homozygous parents that differ at one locus (a cross involving only one pair of contrasting traits) Dominant & Recessive First generation offspring (F1) will be hybrid for one character. 16 P Generation Cross or reciprocal cross gives the same results F1 Generation Tall plant T T Short plant t Selfing of tall (F1) t F2 Generation All tall plants T t No blending of traits Tall plant T Dominant & Recessive T Tall plant T t Tall plant T t Short plant t 3 tall : 1 short 17 t Character pairs selected by Mendel 18 In F1 generation all plants exhibited one trait – called dominant. In F2 generation the ratio between plants exhibiting dominant and recessive traits was approximately 3:1. 19 Interpretation of results 1 2 20 (Punnett square) 21 Conclusion 1st Principal of Mendelian inheritance – Segregation “in the formation of gametes, paired factors (heredity determinants) specifying alternative phenotypes (visible traits) segregate independently of one another” Phenotypes vs Genotypes (During meiosis, alleles for each locus segregate in gametes.) 22 Dominant trait denoted by a capital letter and the corresponding recessive by a lowercase. T/T (Homo.), T/t (Hetero), t/t (Homo.), (on homologs chromosomes) F2 generation particularly clearly illustrates the ‘segregation’ that forms the basis of this law. 23 • Mendel further self-fertilised plants from F2 generation and obtained pure and hybrid plants. • Clear indication that no blend; factors passed on as units: in pure breeding both alike and in a hybrid, different; individual germ cell or gamete always pure with respect to paired factors (alleles). • Thus Mendel’s quantitative approach to inheritance (particulate inheritance), a great contribution to beginnings of Genetics. 24 Testcross • Phenotypes (with dominant trait visible) were crossed with pure recessives to determine whether hetero- or homozygotes. • Testcross still applied to assess the genotype. 25 Intermediate Inheritance Phenotype of heterozygote falls between these two homozygotes – Neither allele is completely dominant over the other – The heterozygous phenotype is distinct from those of the parents, often intermediate between them 26 Second experiment Dihybrid cross: Parental varieties differing in two traits (at two loci) 27 Cross plants with different seed phenotypes Yellow – Round X Green Wrinkled Monohybrid ratio for each trait= 3:1 3:1x3:1= 9:3:3:1 28 29 30 Conclusion Mendel’s 2nd law: ‘Independent assortment’ “factors (genes) located on different pairs of homologous chromosomes assort independently during meiosis” (Alleles of different loci distributed randomly into the gametes independently of each other.) 31 Mendelian inheritance in modern terms Factors (heredity determinants)? Traits? Today we know that the gene loci for some of these traits are located on different chromosomes and are not linked. 32 Crosses Mendel performed • Monohybrid cross – Cross between homozygous parents – Differ at one locus • Dihybrid cross – Differ at two loci Test cross • Between individual of unknown genotype and homozygous recessive individual 33 34 Monohybrid cross in guinea pigs 35 Dihybrid cross in guinea pigs 36 Test cross in guinea pigs 37 • Mendel’s principles of inheritance – Segregation •During meiosis, alleles for each locus segregate – Independent assortment •Alleles of different loci distributed randomly into the gametes •Results in recombination •Production of new gene combinations not found in parent 38 Application of Mendel’s Principles • Many characters in humans, animals and plants are inherited in Mendelian fashion. • Useful in plant and animal breeding. • Many human genetic disorders behave like Mendelian characters and can be traced through pedigree analysis. 39 What is a Pedigree? A pedigree is a diagram that shows the history of a trait as it is passed from one generation to the next. Pedigrees indicate patterns Pedigrees identify carriers of genetic disorders Pedigrees are useful for genetic counseling • Example: a pedigree is like a family tree for one trait. Rules For Making A Pedigree • • • • • • • • Females are represented by circles Males are represented by squares Mother/Father couples are connected by a line Offspring are shown oldest on the left to youngest on the right Half-shaded circle represents a female carrier for the trait Half-shaded square represents a male carrier for the trait Full-shaded circle represents a female with the trait Full-shaded square represents a male with the trait Symbols used in a pedigree recorded ancestry or lineage of a person or family. 42 Pedigree showing pattern of inheritance of a recessive trait Here affected individuals are not found in each generation. The affected offspring comes from unaffected parents. 43 Pedigree showing pattern of inheritance of a dominant trait Every affected child has an affected parent — no generations are skipped in dominant inheritance. 44 Pedigree for albinism 45 46 47 Human diseases that are inherited like Mendelian characters Recessive Disorders: 1) Hemophilia- blood clotting problems, due to sex-linked recessive allele 2) Sickle-cell anemia - lack proper blood proteins and RBC's are sickle shaped versus normal, unable to carry oxygen efficiently, allele causes a simple substitution 3) Phenylketonuria - unable to produce enzymes to breakdown chemicals in diet, can lead to toxic buildup and death 48 Dominant disorders • Huntington's Disease - deterioration of nervous system • Achondroplastic dwarfism - small stature, disproportionate limbs, short broad hands and feet, waddling gait, affects bone growth beginning at birth 49 Hemophilia in the pedigree of Queen Victoria of England 50