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DNA Structure & Replication Worksheet

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Chapter 8: From DNA to Proteins (DAY ONE)
What is DNA?
•
Your “genetic” information (___________________________)
•
___________________________________________________________________
•
DNA is an example of a nucleic acid which is an organic compound/major macromolecule
•
The monomer (basic building block) of DNA is a ___________________________________ many
nucleotides join to form a long chain of DNA.
Nucleic Acids
•
NUCLEIC ACIDS are built from subunits called ____________________
Overview: Structure of DNA
•
DNA is a long macromolecule made up of units called nucleotides. Each
_______________________________________ is made up of 3 basic parts:
▪
a _____________________________________ (DEOXYRIBOSE is the sugar in DNA)
▪
a _____________________________________
▪
a _____________________________________
•
The function of DNA is to _________________________________________ genetic information!
•
SUGAR in DNA is_______________________________
Deoxyribonucleic Acid
●
_____________________________ STRANDED
●
Backbone (sides of ladder) made of _______________________and _______________________
DNA Structure: What does DNA look like?
●
Classic Shape: “____________________________________________”
●
The ___________________________________ of the “ladder” are made up of alternating
________________________________________________________.
●
The “steps” or ___________________________________ of the “ladder” are made of 4 major
________________________________________:
●
▪
Adenine
3. Cytosine
▪
Thymine
4. Guanine
When looking at the Nitrogen Bases….
●
__________ always pairs with __________
●
__________ always pairs with __________
Structure of DNA: Closer Look
●
There are 4 kinds of nitrogenous bases in DNA
o
The __________________________ (larger, double rings)
▪
A = ___________________
▪
o
G = __________________
The ________________________________ (smaller, single rings)
▪
C = __________________________
▪
T = __________________________
Nitrogenous Bases – Steps of a Ladder
●
___________________________________ (2 rings)
●
___________________________________ (1 ring)
Double Helix
●
A double helix looks like a twisted ladder or _____________________________________
o
The 2 strands of the double helix are held together by ________________________________
between adenine and thymine and between guanine and cytosine
▪
__________________________ always pair
▪
__________________________ always pair – this is known as the principle of
__________________________________ base-pairing rules
▪
These are known as _____________________________ rules
Rosalind Franklin
●
At the same time of Watson and Crick, Franklin and her aide Maurice Wilkins were studying DNA.
●
They used ____________________________ crystallography
●
When DNA is bombarded with x-rays, atoms in DNA diffract on the x-rays in a pattern than can be
captured on film.
●
Her x-rays showed an ______________________ surrounded by a circle
James Watson and Francis Crick Double Helix
●
Developed an accurate model of DNA’s three-dimensional model called a
____________________________
●
Published their findings in ______________________, to show their double helix model
o
Two strands of DNA wind around each other like a ______________________________
o
Strands are _____________________________________
Chromosome Structure in Eukaryotes
●
DNA is:___________________________________________________________; Found in
______________________
●
Eukaryotic chromosomes are made of ________________ & ___________________called
______________________
●
Together the DNA & histone proteins forms a bead-like structure called a
_____________________________________
●
Nucleosomes pack together to form thick coiled fibers. When cell is NOT dividing, these fibers are
spread out in nucleus as __________________________________. (Allows reading of code)
●
When cell gets ready to divide, the fibers pack even more tightly to form
_____________________________.(Makes it easier to move DNA during mitosis)
DNA Replication: Why Replicate?
●
In preparation for cell division (________________________________ the
____________________________________ of Interphase), a cell must duplicate its genetic info (DNA)
to pass on to the new daughter cells.
Overview: DNA Replication
●
Replication __________________________ the genetic information.
●
________________________________________ model suggested a way that DNA could be copied.
●
Single DNA strand can serve as a ___________________________, or pattern, for a new strand.
o
Process by which DNA is copied during the cell cycle is called
____________________________________.
o
Replication assures that every cell has a _____________________________ set of
_________________________________ genetic information.
o
Remember, DNA is divided into ________________ chromosomes that are replicated during
the cell cycle.
●
Each strand of the DNA double helix has all the information needed to
_________________________________ the other half by the mechanism of base pairing
●
Because each strand can be ______________________________________________ the other
strand, the strands are said to be complementary.
Duplicating DNA
●
Before a cell divides, it duplicates its DNA in a copying process called
___________________________________
o
During DNA replication, the DNA molecule:
▪
Separates into ___________ strands
▪
Produces __________________________ complementary strands following the rules of
base pairing
o
Each strand of the double helix of DNA serves as a _________________________, or model,
for the new strand
How is DNA copied?
●
The structure of DNA explains how it can be copied. Each strand has all the info needed to construct
the _________________________________other half. If strands are separated,
_________________________ rules allow you to fill in the complementary bases.
Complementary Base Pairing
●
____________________________________________
●
____________________________________________
●
So a complementary strand would look like this
o
Therefore, the strand ______________________________________ will replicate as:
_______________________________________
DNA Replication
●
Sites where strand separation and replication occur are called ________________________________
Replication Steps
1. Enzymes “unzip” molecule by breaking__________________________________ that hold the strands
together and unwind it.
2. _________________________________________ joins nucleotides using original strand as template
and ___________________________________________for errors.
3. Copying happens in ____________________________ directions along the two strands & in
__________________________ places at once.
How Replication Occurs:
●
DNA replication is carried out by a series of ___________________________________:
o
These enzymes _____________________________________________________________
other functions
o
Each strand then serves as a template for the attachment of
________________________________________________________
1. This is known as a ______________________________________________ process
because old strands are used to make new strands
2. The result is ___________________________________________ that are identical,
each one having one original strand and one new strand
Chapter 8: From DNA to Proteins (DAY TWO)
RNA
•
_______________________________________________________
•
Chain of nucleotides, each made of
_________________________________________________________________________________
containing base
•
•
Differs from DNA by:
–
Sugar is _________________________________
–
Has ___________________________________ instead of thymine
–
Is a _____________________________ stranded structure
RNA IS USED TO ____________________________ PROTEINS
–
Remember: proteins are built from _______________________________________
–
Protein synthesis occurs on _____________________________________________
Base Pairs in RNA
•
__________________________________________
•
__________________________________________
•
THERE IS NO __________________ IN RNA!
•
The 3 types of RNA
•
______________________________ = (messenger) codes for polypeptides
•
______________________________ = (ribosomal) makes up ribosomes.
–
•
RIBOSOMES are the protein builders!!!
______________________________ = (transfer) brings the amino acids to the ribosome during protein
synthesis
2 Stages in Making Proteins
–
______________________________________________ – using DNA template to make
mRNA strand
•
–
Writing the code
______________________________________________ – using mRNA strand to create
polypeptides
•
Reading the code
TRANSCRIPTION: _______________________________________________________
●
DNA is in the nucleus
●
Proteins are made in the cytoplasm
•
Where? _________________________________________________
Transcription: DNA ______________________________________
●
This is the process by which mRNA is produced/written (transcribed) from DNA. This process occurs in
the nucleus, because DNA is TOO LARGE to leave the
_______________________________________.
The Major Steps of Transcription
1. ___________________________ gets unzipped
by____________________________________________.
2. The __________________________________ reads along one DNA strand and uses it as a template,
reading one ______________________ at a time.
–
_________________________________ are groups of 3 nucleotides that code for a specific
amino acid.
–
You can think of _________________________ as “__________________________” in a
sentence. Each __________________________________________________________; each
_____________________ (which are made of nitrogen bases) = a
_____________________________; each codon (or word) means something in the mRNA
sentence…the ________________________________________ code for an
_______________________________________________!!!!
•
“___________________________” codon = _________________________
(Methionine)
•
“___________________________” codons =
_________________________________________
3. __________________________________is produced/ __________________________________ with
the complimentary nucleotides.
4. The polymerase keeps making the _______________________ until a
“______________________________” codon is reached.
5. When the “stop” is reached, the new strand of ____________________________________ breaks
away, leaves the nucleus through the nuclear pore, and _______________________________ to the
________________________________. This is where protein synthesis begins.
6. The next major process of translation will occur at the ribosome, in the cytoplasm of the cell.
Transcription: You be the RNA polymerase!
●
DNA Strand = _____________________________________________
●
What is the complementary mRNA?
o
_________________________________________________
Translation: (cell’s way of ________________________________________ the mRNA message)
●
Happens on _______________________________________
●
Transfer RNA (tRNA) __________________________________ and brings in the correct amino acid
●
Process that ______________________________________________, or translates, an mRNA
message into a polypeptide.
o
●
●
One or more polypeptides make up a protein.
Remember, the “language” of nucleic acids uses four nucleotides:
o
DNA: ___________________________________________
o
RNA: __________________________________________
“Language” of proteins, on the other hand, uses ______________ amino acids.
o
Amino acids are coded by mRNA bases sequences.
Translation: ____________________________________________________________________________
●
The synthesis of polypeptides (PROTEINS) by the ribosome using the message carried by the mRNA.
Steps of Translation
1. The _____________________________________________________ to the first codon of
__________________________.
2. A _______________________________________________________ matches up to the first codon
on the ________________ – this is always __________________________________________”
–
An anticodon is the complimentary base pair that matches the codon. For example, if the codon
is ___________________, the anticodon is _________________________________.
3. The ________________________________ is carrying an
____________________________________.
4. The ribosome (________________________________) _____________________________ the
_______________________ through and ______________________________ the next codon and
_____________________________ up the correct _________________________________; bringing
the next _______________________________________into line.
5. The ribosome binds the first and second amino acids together.
6. The _____________________________________________ after they “drop off” the amino acids.
7. This process occurs over and over until a ________________________________________ is met.
8. The result is a chain of polypeptides __________________________________________.
The Genetic Code
●
The dictionary of the genetic code =
______________________________________ mRNA codon chart
●
64 Codons – only _______________ amino acids
●
______________________________
Last letter can change without mutation…
Ex: UUA & UUG both leucine
Practice
●
What amino acid does the codon UUU code for?
________________
●
What amino acid does the codon GAC code for?
________________
Start and Stop Codons – What’s a gene?
●
A _______________________________ amino
acid is found at the beginning of most proteins –
_______________________________________. The codon for this is
____________________________.
●
A ___________________________________ codon DOES _____________________ CODE FOR
ANY AMINO ACID – it is the signal that the protein is complete and can be released…
Translation: the basic concept
1) ______________________________ (ribosomal RNA) attaches to
__________________________and starts reading the
_________________________________
2) ______________________________ (transfer RNA) – carries amino acids and attaches them
to the growing protein chain
3) When protein production is complete, the ribosome releases the
___________________________
Translation: the basic concept continued….
•
mRNA feeds into the ribosome
–
•
________________________________________
tRNA decodes the mRNA
–
How? ________________________________________________________________
•
aa’s coded for by ____________________________ are attached to ______________________;
•
aa’s brought by tRNA link up to form a protein _________________________________________
_____________________________ carries DNA’s instructions
•
Central dogma of molecular biology:
–
___________________________________ copies DNA
–
Transcription converts ________________________________ into an intermediate molecule,
RNA
–
Translation interprets an RNA message into a string of amino acids, called a
_____________________________.
•
Single or multiple polypeptides working together to form a
_____________________________________.
–
______________________________________________________
Chapter 8: From DNA to Proteins (DAY THREE)
Mutations
•
Mutations are _______________________________________ in DNA that may or may not affect
phenotype.
•
Mutations are any changes that take place in DNA:
•
•
Can be spontaneous or caused by _______________________________________________
•
Chemicals, high temperatures, UV light,
•
Radiation
Can ___________________________________________ the genetic code, and be replicated
when forming new body cells.
•
In sex cells, can be ___________________________________________ to offspring.
•
Mutations can be neutral, beneficial, or harmful
•
ex: Blue eyes – a mutation that occurred 6-10,000 years ago, can be traced back to
one ancestor
Point mutations
•
_________________________________________: change in single base pair of DNA
•
if does not affect the length of the code, will just change the amino acid in that position –
_________________________________________
•
if does change the length of the code, is called a frameshift mutation, and are two types:
________________________________ AND
_______________________________
Some mutations affect a single gene, while others affect an entire chromosome.
•
A mutation is a change in an organism’s DNA.
•
Many kinds of mutations can occur, especially during _______________________________________.
•
A point mutation substitutes ___________________________________ for another;
____________________________
•
Change in _____________________________ base pair of DNA
•
Many kinds of mutations can occur, especially during replication.
•
A frameshift mutation __________________________________________ a nucleotide in the DNA
sequence.
Chromosomal Mutations
•
Chromosomal mutations affect many genes.
•
Chromosomal mutations may occur during _____________________________________
o
Gene duplication results from unequal _________________________________.
Effects Chromosome Numbers and Chromosome Shapes
1. Mistakes in numbers of chromosomes:
•
_________________________________ -- members of a pair of homologous chromosome do not
move apart properly
–
result in offspring that have
–
________________________________ – abnormal chromosome number
•
Trisomy or Monosomy or Polyploidy
2. Mistakes in shape of chromosomes:
a. _________________________________ – part of chromosome is broken off and lost
completely
b. _________________________________ – broken fragment of chromosome attaches to
sister chromatid so
section is repeated on that chromatid
c. _________________________________ – when fragment reattaches to original
chromosome but in reverse order
d. _________________________________ – broken fragment attaches to a nonhomologous
chromosome
Mutations may or may not affect phenotype.
•
Chromosomal mutations tend to have a big effect.
•
Some gene mutations change phenotype.
–
A mutation may cause a ____________________________ stop codon.
–
A mutation may change protein _______________________ or the active site.
–
A mutation may change gene _________________________.
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