Germ theory Learning Objective: To be able to evaluate evidence for germ theory. Lesson Outcomes Vocabulary Germ theory Could be able to explain how each discovery fed into a bigger picture understanding of infectious disease. Should be able to describe the discoveries each scientist made. Must be able to identify key scientists involved in developing our understanding of ‘germ theory’ Skills being used in this lesson: Listening Presenting Problem Solving Creativity Staying Positive Aiming High Leadership Teamwork Virtue linked to this lesson: Good temper Ignaz Semmelweiss Semmelvweiss was investigating the cause of deaths from childbed fever. • He noticed that maternity wards that had more midwives than doctors had lower death rates. • He then noticed that the doctors would conduct autopsies and then, without washing their hands, would go to work on the maternity wards. • The midwives did not conduct autopsies. • He got all the staff to wash their hands with chlorinated hand wash and the deaths decreased. https://www.youtube.com/watch?v=KSLCkT2ttXQ Cholera and John Snow After observing Cholera outbreaks, John Snow did not believe the cause of the disease was miasma Part 1: https://www.youtube.com/watch?v=TLpzHHbFrHY&t=6s Part 2: https://www.youtube.com/watch?v=1jlsyucUwpo Part 3: https://www.youtube.com/watch?v=9NVT6iZP2qg&t=25s John Snow and Cholera All residents who’s drinking water well is down hill of the sewage runoff down the street got ill and most of those who’s well is uphill of the sewage run off were fine. John Snow noticed that those who's water came from Southwark and Vauxhall water company got ill, but those who got their water from Lambeth were fine Direction of river flow Southwark and Vauxhall drew their drinking water from downstream of a sewage outlet Only 8 deaths outside the area closest to the Broad st pump. 3 were children who went to school near Broad st 3 were workers who also stopped at the Broad st well The workhouse was close to the Broad st pump, but did not have many deaths. John Snow found out they had their own private water pump from a safe water works The Broad street pump There were few deaths at the Brewery close to the Broad st pump, but, John discovered that they only drink beer (alcohol kills bacteria) Joseph Bazalgette’s Sewers https://www.youtube.com/watch?v=cba7di0eL8I Louis Pasteur https://www.youtube.com/watch?v=OXdbQ1JkX7c Joseph Lister In 1861, Lister observed that 45 to 50 percent of amputation patients died from sepsis. In 1865, he learned of Louis Pasteur's theory that microorganisms cause infection. Using phenol as an antiseptic, he reduced the mortality rate in his ward to 15 percent within four years. https://www.youtube.com/watch?v=Vg1hqZanDa0 https://www.youtube.com/watch?v=4ZvaeugsRPU Comparing healthcare then and now 1800s Pain relief for patients Hand cleaning Uniform Cleanliness of surgery Cleanliness of equipment Death rate 2000s Then and Now • 1800s Surgery – – – – – – – No anaesthetic No hand cleaning No clean clothes Sawdust on floor No implement cleaning No cleaning of table High death rate from disease Then and Now • 2000s Surgery – – – – – – – Sterile implements Hand cleaning Clean clothes Face and hair masks Sterile gloves Sterile bed sheets Clean room (no sawdust) Hypothesis This investigation will look at the effect of disinfectant on bacteria. • Agar plates covered with bacteria can be used to test substances to see if they have antiseptic properties. The test substance can be placed in a hole in the agar or paper discs soaked in the test substance can be placed onto the bacteria-covered agar. If the substance kills bacteria, they won’t grow in the area near paper discs or the holes. • You are going to test the hypothesis that: The higher the concentration of an antiseptic, the better it is at killing bacteria. Equipment Equipment • • • • • • • • Mouthwash, measuring cylinder, beakers, agar plate which contains the bacteria and has six holes, marker pen, dropping pipette, sticky tape, distilled water How will it be used to test the hypothesis? Control variables Autoclave: https://www.youtube.com/watch?v=NTUp_U22gNo What will you keep the same? • • • • • Distilled water Agar nutrient Jelly Antiseptic Well size Same species of bacteria • Same amount of disinfectant solution in each well • Temperature (incubation) How will you keep it the same? Why will you keep it the same? Risks What harm/ injury could happen to you? How can you prevent yourself/ others being harmed/ injured? Overall plan Method (overall plan) 1. Make up some different concentrations of mouthwash by mixing mouthwash with water in the beakers. Carefully label each beaker with the concentration that it contains. 2. Use the marker pen to write on the bottom of your agar plate, which of the concentrations of mouthwash is to be added to which hole. 3. Now add some drops of each mouthwash concentration to the holes in the agar in the dishes. 4. Tape the lid onto your dish like this: 5. Give your plate to your teacher, who will put it in a warm place for 24–48 hours. 6. Measure the diameters of the clear areas around the holes in the agar plate. You could measure them at two different times. Results Independent variable: concentration of antiseptic Units measured in? % Dependent variable: diameter of area with no bacteria Units measured in? mm Test 1 Test 2 Test 3 Average 0% 0 0 0 20% 5 6 4 40% 11 11 13 60% 19 23 24 80% 27 27 28 100% 31 29 30 Average Dependent variable (units) Processing and presenting your results Independent variable (units) Secondary data Dettol Diameter of the area around the filter paper disc disinfectant without bacteria growth (mm) concentration 1st Generation 2nd Generation 3rd Generation 4th Generation 25% 32 33 32 31 50% 37 38 35 37 75% 48 46 50 49 Pathogens Learning Objective: To be able to evaluate problems and diseases caused by pathogens. Lesson Outcomes Vocabulary Pathogen Could be able to explain how signs of a disease can be used to identify the pathogen. Should be able to describe some problems and diseases caused by bacteria. Must be able to describe diseases caused by different pathogens. Skills being used in this lesson: Listening Presenting Problem Solving Creativity Staying Positive Aiming High Leadership Teamwork Virtue linked to this lesson: Good temper Starter Activity • Write down the names of any diseases you know or must have heard of. • Is the disease infectious or not? • What were they caused by? A microorganism that causes disease is called a Pathogen. Keywords: Micro-organism, Microbe, Bacterium (bacteria), Virus (viruses), Pathogen , Infectious Bacteria • Are very small cells • Reproduce rapidly in your body • Make you ill by- damaging cells and producing toxins Cell Wall Cell Membrane Chromosome Cytoplasm NO true nucleus Viruses Protein Coat • Viruses are not cells. • They replicate themselves by invading your cells. • The cells burst and release the new virusesthis makes you feel ill! Genetic Material Tail NO true nucleus, NO cytoplasm Bacteria – The Key Points • • • • • - Are living cells Can multiply very rapidly Up to 0.01mm long Release toxins or poisons that make us feel unwell Examples include: Food poisoning Cholera Gonorrhoea KS3 CHECK: What are the main components of a bacterial cell? Viruses – The Key Points • Are NOT living cells – they have no nucleus (RNA inside protein coat) • Are even smaller than bacteria • Can ONLY reproduce inside our cells • The virus enters the cells, makes lots of copies and then they burst out of the cell into the bloodstream • Examples include: - Flu (Influenza) - Colds - AIDs - Chicken Pox SARS Bacteria and Viruses Tetanus leprosy Diabetes Cold sore Tuberculosis Syphilis Chickenpox Influenza Typhoid fever Cholera AIDS HIV Picture 2 Picture 1 Bacteria Picture 3 Virus Pathogen Attack BACTERIA VIRUS Bacteria do their damage OUTSIDE of the cell. Viruses do their damage INSIDE of the cell. They do not need to get into the cells to cause damage. They MUST get into the host cell to cause damage. How microbes make us feel ill Bacteria Viruses 1. 2. T = toxin 3. Comparing sizes... You are the size of Europe A fungus is the size of a football pitch A bacteria would be the size of a bus A virus would be the size of a football COMMUNICABLE DISEASE Virus lifecycle- the Lytic cycle https://courses.lumenlearning.com/microbiology/chapter/the-viral-life-cycle/ Virus attached to cell membrane/ wall Virus injects its DNA inside cell Cell copies the virus DNA More viruses are made Viruses ‘burst’ out of the cell to begin the cycle again. Investigation – 10 min Aim: We are going to take swabs of different parts of the lab to see what microbes we can find. Apparatus Sterile swabs Agar dishes Permanent pen to label cellotape Physical and chemical defences Learning Objective: To be able to explain how sexually transmitted infections (STIs) are spread and how this spread can be reduced or prevented. Lesson Outcomes Vocabulary Barrier Could be able to explain how the spread of the STIs Chlamydia and HIV can be reduced or prevented. Should be able to explain how physical and chemical barriers protect the body. Must be able to provide examples for physical and chemical barriers. Skills being used in this lesson: Listening Presenting Problem Solving Creativity Staying Positive Aiming High Leadership Teamwork Virtue linked to this lesson: Good temper How does our body protect us? • On your piece of paper draw around a group member and label all the places pathogens can enter the body. • Then write what that part of the body does to try and prevent their entry • Try to give an explanation of how each works (5 minutes) Physical barriers Chemical barriers Biological barriers • • • • • Hair Cilia Mucus Skin Blood clotting • Stomach acid • Lysosomes and acid secreted through skin • Saliva • Urine • White blood cells • Enzymes • Gut flora Eyes Respiratory tract Digestive tract Stomach acidity https://www.youtube.com/ watch?v=IWMJIMzsEMg Starter: Skin Low pH Anatomic barrier Sweat, sebum Antimicrobial secretions Genitourinary tract Washing by urine Vaginal lactic acid 47 Respiratory tract Mucus Ciliated epithelium Phagocytosis Digestive tract Mechanical flushing Stomach acidity Alkaline pH in the colon and ileum Bacteriocins (colon) Proteinaceous toxins produced by bacteria to inhibit the growth of similar or closely related bacterial strain(s). Eyes Washing by tears Lysozyme Skin Low pH Anatomic barrier Sweat, sebum Antimicrobial secretions Genitourinary tract Washing by urine Vaginal lactic acid 48 Immune system Learning Objective: To be able to explain the role of antibodies in the immune system. Lesson Outcomes Vocabulary Lymphocyte Could be able to explain how immunization protects against infection by a pathogen. Should be able to explain the role of antibodies in the immune response. Must be able to describe how the immune system protects the body by attacking pathogens. Skills being used in this lesson: Listening Presenting Problem Solving Creativity Staying Positive Aiming High Leadership Teamwork Virtue linked to this lesson: Good temper Immune response https://www.youtube.com/watch?v=jzFDGz-bjcM Antibodies Antigens The cells in our body contain antigens, these are your body’s way of telling which cells are your own, and which cells are unwanted invaders. Bacteria or viruses, have different shaped antigens from yours, and your body can tell that they don’t belong. antigen cell red blood cell Antibodies • One type of white blood cell is called a lymphocyte – these white blood cells are responsible for killing bacteria by producing antibodies Antibodies Each different type of microorganism causes a different type of antibody to be produced. Antibodies are Y shaped proteins made by white blood cells. An antibody can only bind to the micro-organism that caused it to be produced. They are specific. Antibodies are specific to the microbe that they destroy (like keys) http://www.youtube.com/watch?v=lrYlZJiuf18&feature=related These are molecules which are shaped to fit onto invaders’ antigens. They stick them together so they can’t move and they can be engulfed by phagocytes Task: Match up the antibody with its microbe. Then explain how the white blood cell recognises the microbe. Antibodies A small number of these white blood cells stay in the blood after the first infection. Phagocytosis • One type of white blood cell is called a phagocyte – these white blood cells are responsible for killing bacteria by surrounding and ingesting them. • They DO NOT EAT the pathogens Digestion 1 mark for correct steps Step 1 Some of the cells around the wound secrete chemicals that act as a signal to tell the phagocyte it is need. Step 2 The phagocyte detects the bacteria and engulfs it. Step 3 The lysosome found in the bacteria fuses to the bacteria which contains acidic enzymes and toxic chemicals. The enzymes digest the bacteria and absorb any useful products and expels the rest. Step 4 1. Pathogen infection enters body 2. Lymphocyte white blood cells work out which antibodies to make 3. Antibodies immobilise pathogen 4. Phagocyte white blood cells digest the pathogen 5. Memory Lymphocytes (white blood cells) stay in the body remembering how to fight the infection quickly if it invades again. How do we develop our immunity? Pathogen Draw a cartoon strip to explain how our immune system fights infection Keywords: Micro-organism, Microbe, Bacterium (bacteria), Virus (viruses), Pathogen , Infectious Review: Put the stages of immunity in the right order The immune system remembers how to make the right antibodies, and the pathogen is killed more quickly. The same pathogen tries to infect the person again. A pathogen like chicken pox virus enters the body. The white blood cells of the immune system create antibodies, antitoxins which destroy the pathogens. The person is now immune to the pathogen, and is unlikely to get the same illness again. The pathogen secretes toxins, which make the person feel ill. Answers 1 A pathogen like chicken pox virus enters the body. 4 The same pathogen tries to infect the person again. 2 3The white blood The pathogen secretes toxins, which make the person feel ill. cells of the immune system create antibodies and antitoxins which destroy the pathogens. 5 The immune 6The system remembers how to make the right antibodies, and the pathogen is killed more quickly. person is now immune to the pathogen, and is unlikely to get the same illness again. Primary and Secondary Infection • As part of your trainee doctor role you have been monitoring a patients blood over 90 days to understand how the concentration of antibodies change. • Plot a graph to show what happens to the concentration of antibodies in the blood when a person is infected twice by a MO Days 0 5 10 15 20 25 30 35 40 45 Concentration of antibodies 0 3 5 7 20 25 15 10 5 5 Days 50 55 60 65 70 75 80 85 90 Concentration of antibodies 4 4 4 4 15 25 40 50 45 Plot this data in a graph to help you analyse it accurately Analysing the results • The first infection occurred at day 0, the second infection occurred at day 70. • What do you notice about the number of antibodies in the 2 separate infections? • Can you think why this might be? Describe what is happening at stages A – E, do this on your graph. 6 MARKER PRACTICE Diane has been to the doctor to try and find out why she feels so unwell. The doctor has told her that she needs to have some tests done to see what type of pathogen may be causing the problem. The doctor says that in the mean time her body will do a pretty good job of stopping her feeling ill without any medicine. Can you explain to Diane what the doctor means by pathogens, and how her body is going to make her better. Immunisation Learning Objective: To be able to explain how vaccinations create immunity to a particular pathogen Lesson Outcomes Vocabulary Vaccination Could be able to evaluate claims about controversial vaccines in the media Should be able to describe the action of vaccinations and how it leads to immunity. Must be able to define the term immunity Skills being used in this lesson: Listening Presenting Problem Solving Creativity Staying Positive Aiming High Leadership Teamwork Virtue linked to this lesson: Good temper Edward Jenner https://www.youtube.com/watch?v=yqUFy-t4MlQ What is a vaccine? Vaccines create immunity without making you sick Vaccines contains • dead pathogens, or • live but weakened pathogens, or • parts of the pathogen The white blood cells respond to the vaccine as if it were a disease by creating antibodies. Quick questions: 1. Why do we need different vaccines for different diseases? 2. New flu vaccines must be made every year. Why? How do vaccines work? https://www.youtube.com/watch?v=SduMbjW2V9A A small number of these antibodies remain in the blood after the vaccination. 1 2 3 6 5 4 Apply your knowledge • Thinking back to your immunity graph – can you now explain how a vaccine works? Herd immunity What do you know about MMR or HPV? What do you know about vaccines? Vaccines and Autism • In 1985, a doctor found a link between children getting vaccines and being diagnosed with autism • Afterwards, it was found that he was paid to falsify the results • Since then, thousands of studies have found NO link The MMR Debate There is a link between the MMR vaccination and autism. Proof: This graph shows that autism rates grew in California after the MMR vaccination was introduced. The MMR Debate Result: Less children were vaccinated. The MMR Debate Lets look at that data again…. It appears to show more cases of autism being diagnosed each year. In fact, it shows all people registered as having autism in a single year, 1991, plotted by year of birth. It does not account for the rise in California’s population, changes in how autism was diagnosed and a trend to diagnose children at an earlier age, which might explain the apparent rise in cases. The MMR Debate In 2007 it was proved that there is no link between MMR and autism. All the studies that were used as proof were flawed. One, carried out by a British Doctor was based on 12 autistic children who he paid to take blood from at his son’s birthday party. He was also being paid for advising solicitors on legal action by parents who believed their children had been harmed by MMR. Hardly an unbiased study! Think-Pair-Share • In your group discuss the advantages and disadvantages of vaccines • Produce a rough table in your book of your ideas Advantages Disadvantages Vaccinations Advantages • Help control infections • Big outbreaks of diseases can be prevented if a large number of population is vaccinated Disadvantages • Don’t always give you long term immunity/ cover all strains • Sometimes they can cause a bad reaction (Although this is very rare) “I am worried about having my child vaccinated, I have heard there is a link between vaccination and autism. I am also worried he may have an allergic reaction…” Mrs. B Smith Your task… write a response to Mrs. Smiths letter, and explain to her the pros and cons of having her child vaccinated. Extension: Explain why the number of cases of MMR rose after 1985? Antibiotics Learning Objective: To be able to explain how Antibiotics are used in the treatment of infections Lesson Outcomes Vocabulary Antibiotic Could be able to explain why each stage of the development of a new medicine is needed. Should be able to explain why antibiotics cannot be used to treat infections by pathogens other than bacteria. Must be able to explain why antibiotics are useful for treating bacterial infections Skills being used in this lesson: Listening Presenting Problem Solving Creativity Staying Positive Aiming High Leadership Teamwork Virtue linked to this lesson: Good temper Antiseptics https://www.youtube.com/watch?v=Lk2v8BvIeTM (35:00) Alexander Fleming https://www.youtube.com/watch?v=N2-7UQWrYPY Fleming Starter What do the following key words do: 1. Antibacterial 2. Antiviral 3. Antifungal 4. Antibiotic 5. Antiseptic Painkillers • Medicines contain useful drugs. • Often, medicines don’t affect the microbe making you feel ill, they soothe the symptoms. – E.g. throat sweets, – E.g. painkillers (aspirin, ibuprofen) Medicines relieve symptoms but do not kill pathogens! • Some medicines do target the microbe… Antibiotics • Antibiotics damage bacteria and eventually kill them e.g. penicillin • Different antibiotics kill different types of bacteria. • Each type of antibiotic interferes with the bacteria’s life processes, e.g making a cell wall. • They do not kill viruses, protozoa or fungi. • However, they don’t affect human cells Antibiotics have no effect on viruses either. Antiseptic Antiseptics/Disinfectants kill bacteria outside body but are too poisonous to use inside body. Quick Review What’s the difference between painkillers and antibiotics? Painkillers (e.g. aspirin) are drugs that relieve pain. However, they don’t actually kill the pathogen, they just help reduce the symptoms. Antibiotics (e.g. penicillin, amoxicillin) actually kill (or prevent the growth of) the bacteria causing the problem, without killing your own body cells. Different types of antibiotic kill different types of bacteria. But, antibiotics don’t kill viruses! Type of medicine Painkillers Antibiotics What do they do in the body? (How do they help you?) Any problems? Give some examples (Outside the body/ on inorganic objects such as tables). Antibiotic efficiency Which one of these antibiotics is the most effective? How can you tell? Antibiotic efficiency Antibiotics diffuse into the agar and kill the bacteria • Not all antibiotics are effective against every type of bacteria. • That is why it is important to use a specific antibiotic for a specific type of bacteria. Investigating effectiveness Agar plates covered with bacteria can be used to test substances to see if they have antiseptic or antibiotic properties. A paper disc can be soaked in the test substance and placed on the agar. If the substance kills bacteria, they won’t grow in the area near paper discs or the holes. Results Independent variable: plant extract Garlic Ethanol Penicillin Graph Conclusion Dependent variable: diameter of area with no bacteria Units measured in? mm Test 1 Test 2 Test 3 Average Antibiotic Resistance Bella’s doctor prescribed her antibiotics for an infected wound. Just like us, the microbes in Bella’s wound showed a lot of variation. The darkest ones were hardest to kill. When Bella took antibiotics she felt better straight away ... ... because most of the bacteria died. A day later the pus was gone from her wound. After three days her wound began to heal. Most of the bacteria were gone. Taking more antibiotics seemed pointless, so Bella threw them away. That was two weeks ago. Bella is back in hospital and her leg is worse than before ... ... but now the antibiotic won’t help. The genes that made one microbe harder to kill have been passed to all its offspring, so they are resistant to the antibiotic. Antibiotic Resistance • If a bacteria cannot be killed by a certain antibiotic then we say that it is resistant to that type of antibiotic. • For example, MRSA stands for methicillin resistant Staphylococcus aureus and it is called as such because it is resistant to methicillin. Resistance to Antibiotics • Antibiotics discovered in 1940s – thought to be the end of people dying from bacteria induced diseases • But the bacteria started to become resistant to the antibiotics Exam-Style Question Peer Assessment In the population of bacteria, some bacteria may have a mutation in their DNA which makes them resistant to the antibiotic. The antibiotic kills the normal bacteria, but the bacteria with the mutation survive because they are resistant. Give your partner a mark out of 3 Peer Assessment mutate - sometimes the mutations cause them to be resistant Bacteria can to (not killed by) an antibiotic . 2. If you have an infection , some of the bacteria might be resistant to antibiotics. 3. This means that when you treat the infection, only the non-resistant strains of bacteria will be killed . 4. The individual resistant bacteria will survive and reproduce , and the population of the resistant strain will increase . This is an example of . natural selection infection 5. This resistant strain could cause a serious that can’t be treated by antibiotics. E.g. MRSA (methicillin-resistant Staphylococcus aureus) causes serious wound infections and is resistant to the powerful antibiotic methicillin . 6. To decrease the rate of development of resistant strains, it is important for doctors to avoid over-prescribing antibiotics. Therefore, you will only get them for more serious illnesses and infections. • Word Bank: Resistant, increase, treat, survive, infection, methicillin, over-prescribing, mutate, infection, decrease, antibiotic, can’t, killed, resistant, non-resistant, reproduce, natural selection, MRSA 1. https://www.youtube.com/watch?v=tMPY-zf8X94 https://www.youtube.com/watch?v=znnp-Ivj2ek Hospitals have introduced programmes to reduce MRSA infections in patients because antibiotics have become less effective. The graph shows the number of males infected with MRSA during their stay in hospital. A programme of intensive use of antiseptics in hospitals has been used since 2005. Use the information given and your own scientific knowledge to explain the trends shown in the graph. (6) Developing new drugs Safety Effectiveness Dosage This is important as some drugs are toxic, and have other side effects that might be harmful to people. This is also known as efficacy, and checks how well the drug cures the disease, or improves symptoms. This varies, and has to closely controlled, as too high a concentration might be toxic. Drug trial failure examples: • Thalidomide past the drug trials at the time, but cause sever birth defects. • Penicillin was not effective when tested on animals and almost never made it to human trials. • Zelmid an antidepressant that passed animal trials, but caused severe neurological problems in humans. • Flosint an arthritis drug that passed animal trials, but, caused deaths in humans. • Nomifensine another antidepressant, was linked to kidney and liver failure, anaemia, and death in humans. Developing new drugs Three stages of testing drugs There are three main stages of testing: • Preclinical drug trials - The drugs are tested using computer models and human cells grown in the laboratory. This allows the efficacy and possible side effects to be tested. Many substances fail this test because they damage cells or do not seem to work. • Animal trials - Drugs that pass the first stage are tested on animals. In the UK, new medicines have to undergo these tests. But it is illegal to test cosmetics and tobacco products on animals. A typical test involves giving a known amount of the substance to the animals, then monitoring them carefully for any side-effects. • Human clinical trials - Drugs that have passed animal tests are used in clinical trials. They are tested on healthy volunteers to check that they are safe. The substances are then tested on people with the illness to ensure that they are safe and that they work. Low doses of the drug are used initially, and if this is safe the dosage increases until the optimum dosage is identified. Developing new drugs Developing new drugs Title: Plant defences Date: LO Describe how plants respond to pathogen infections. SC Silver - Describe some physical barriers of plants to pests and pathogens. Gold – Describe some chemical defences of plants to pests and pathogens. Platinum- Describe how plant protective chemicals are used to treat human diseases or symptoms. https://www.youtube.com/watch?v=HIll-_blL5c Ash die back (Chalara) https://www.youtube.com/watch?v=Hja0SLs2kus Plant defences https://www.youtube.com/watch?v=zVbponLWnK8 the very dead hungry caterpillar Plant barriers to infection Physical Chemical Hairs Waxy cuticle Epidermis Guard cells Bark Thorns Suberins Toxins Bitter tasting chemicals Pungent smells Wind, water, insects and chemotaxis help pathogens reach their hosts Once they reach their host they need to get inside the plant to cause disease .. that’s not so easy. Pathogens must overcome formidable plant defences: physical and chemical barriers Let’s start with the physical … Waxes cover many plant surfaces providing the first physical barrier to pathogen entry. This Scanning Electron Microscope (SEM) image shows waxes around the only ‘weak spot’ in a leaf’s physical barrier – the stomata. Some pathogens head specifically for this opening. The pathogen must gain entry through wax layers, the plant cuticle and the cell wall. Tough bark and/or thorns will deter a herbivore In some case, xylem vessels maybe blocked by the formation of tyloses preventing pathogen spread. SEM of xylem vessels Papillae (P) may form on the inner side of cell walls. This structure can trap invading pathogens. Papilla Fungal Infection Peg Fungal spore This SEM image of powdery mildew attacking barley, shows a ‘failed’ papilla (red), and the haustorium (fungal feeding structure) in a barley cell. Plants actively defend themselves against pathogens Plants resist pathogens through active processes that include recognition of the pathogen and defence responses to fight it Inside the Plant the battle continues Mint Witch hazel Chemical Barriers Anti-microbial compounds inside roots of oat Many chemical reactions occur inside plant cells in response to the invading pathogen