Student Mastery Scale of Learning Goals Date Page Learning Goal Homework Mastery 1 Date Page Learning Goal Homework Mastery Unit Goals Construct and revise an explanation based on evidence for how carbon, hydrogen, and oxygen from sugar molecules may combine with other elements to form amino acids and/or other large carbon-based molecules Vocabulary 2 Content Academic molecules elements amino acids Carbon-based Carbon Hydrogen Oxygen construct revise evidence model simulation Lines of Evidence Elements that form covalent bonds share electrons to be most stable Carbon is found in all large biological molecules because it has 4 valence electrons, can form 4 covalent bonds, these bonds can be with another carbon or some other element, large polymers can be formed when many carbons bond together. There are four major kinds of large biological molecules called macromolecules: Nucleic Acid, Lipids, Carbohydrates, and Proteins. Sugar is made of covalently bonded carbon, hydrogen, and oxygen elements Sugars bonded together form polymer chains called carbohydrates that we eat. Amino acids have backbones made of carbon, hydrogen, oxygen, and nitrogen. Amino acids bonded together form polymer chains called proteins that we eat. Some amino acids we must eat and some our body can make using compounds obtained when sugars are broken down. To break down (catabolism) or to synthesize (anabolism) enzymes are needed. Enzymes speed up chemical reactions by providing an active sites that creates an alternate pathway with lower activation energy (the energy to make the reaction go). Reflection ___________________________________________________________________ ___________________________________________________________________ ___________________________________________________________________ ___________________________________________________________________ ___________________________________________________________________ ___________________________________________________________________ ___________________________________________________________________ ___________________________________________________________________ ___________________________________________________________________ ___________________________________________________________________ ___________________________________________________________________ ___________________________________________________________________ 3 ___________________________________________________________________ ___________________________________________________________________ _______ 4 Interactive Notebook Score Sheet Biochemistry Unit 1 Quarter I Fall Semester Date Score/Max Quizzes/Formatives Score Retake Needed (yes or no) Peer Initial Parent Initial Unit EXAM Name of Scored Assignment Date Due Score/Max Peer Initials Level of Effort Learning Self Assessment Histogram 1-5 (5-I got it could teach it, 1-I need to ask more questions) 5 Graphing Check Name:_______________ Date: ________________Block:_____ Drawing: Using Graphs to Understand Biology -Graphing and Interpretation Graphing is a tool with which to understand the ideas of biology more fully. The different types of graphs: circle graphs (pie charts), bar graphs, and line graphs are best suited to certain types of biological data. For example, changes in a variable (such as the number of plants) over time are often best described by means of a line graph. In this activity, you will learn more about the strengths and weaknesses of using graphs to display information. The table on the right provides data on the number of aquatic plants found in a small pond over a period of days. Draw a graph below that reflects these data. To make the graph, you will first need to select appropriate units and scales for the graph’s horizontal (x) axes and vertical (y). In this case, the manipulated variable is time (x) and what you are measuring is the number of plants (y). Utilize the graph you have drawn to answer these questions. 1. How many plants were likely to have been in the pond on day 15? 2. How many plants would you predict will be in the pond on day 22? 3. How many plants do you think were in the pond on day 1? Analyze Exchange graphs with a partner. Evaluate how well your partner’s graph illustrates the data in the table. What suggestions would you make for improving your partner’s graph? 6 The Scientific Method Check Choose the step of the scientific method in Column B that best matches the example in Column A, and write the corresponding letter in the space provided. Column A _____ 1. Write an article describing what you learned about the ant population on school grounds. _____ 2. Last week there were no ants near the front door of our school. Now there is a large colony. Where did the colony come from. _____ 3. I think someone released ants from their ant farm near the front door of our school. _____ 4. There are a total of three ant colonies on the school grounds. Four of the 10 residents who live near the school also have ant colonies in their yard. The residents are neighbors; they live next door to one another on the same side of the street. None of the residents has ever owned an ant farm. None of the students surveyed had any information about where the ants came from. Column B a. Ask a question. b. Form a hypothesis. c. Test the hypothesis. d. Analyze the results. e. Draw conclusion. f. Communicate results. _____ 5. Evidence seems to indicate that our rivals, the Hornets, placed the ant colony on our school grounds. _____ 6. I am examining the school grounds and surveying students and nearby residents for information about where the ants came from. After reading all of the steps in the scientific method described in questions 1 – 6 above, do you agree with the conclusion? Why or Why not, “cite evidence”? ___________________________________________________________________ ___________________________________________________________________ ___________________________________________________________________ ___________________________________________________________________ Reflection – Which steps did you miss give some ways that your thinking was corrected. ___________________________________________________________________ ___________________________________________________________________ ___________________________________________________________________ ___________________________________________________________________ 7 Notes about graphing 8 Flip up Vocabulary output 9 Scientific Method In Action1 The Strange Case of BeriBeri In 1887 a strange nerve disease attacked the people in the Dutch East Indies. The disease was beriberi. Symptoms of the disease included weakness and loss of appetite, victims often died of heart failure. Scientists thought the disease might be caused by bacteria. They injected chickens with bacteria from the blood of patients with beriberi. The injected chickens became sick. However, so did a group of chickens that were not injected with bacteria. One of the scientists, Dr. Eijkman, noticed something. Before the experiment, all the chickens had eaten whole-grain rice, but during the experiment, the chickens were fed polished rice. Dr. Eijkman researched this interesting case. He found that polished rice lacked thiamine, a vitamin necessary for good health. 1. State the Problem 2. What was the hypothesis? 3. How was the hypothesis tested? 4. Should the hypothesis be supported or rejected based on the experiment? 5. What should be the new hypothesis? How Penicillin Was Discovered In 1928, Sir Alexander Fleming was studying Staphylococcus bacteria growing in culture dishes. He noticed that a mold called Penicillium was also growing in some of the dishes. A clear area existed around the mold because all the bacteria that had grown in this area had died. In the culture dishes without the mold, no clear areas were present. Fleming hypothesized that the mold must be producing a chemical that killed the http://www.uoguelph.ca/~gbarr on/MISC2003/penici8.jpg bacteria. He decided to isolate this substance and test it to see if it would kill bacteria. Fleming transferred the mold to a nutrient broth solution. This solution contained all the materials the mold needed to grow. After the mold grew, he removed it from the nutrient broth. Fleming then added the nutrient broth in which the mold had grown to a culture of bacteria. He observed that the bacteria died. This observation was later used to develop antibiotics used to treat a variety of diseases. 6. Identify the problem. 7. What was Fleming's hypothesis? 8. How was the hypothesis tested? 9. Should the hypothesis be supported or rejected based on the experiment? 10. This experiment led to the development of what major medical advancement? 1 Adapted from http://www.biologycorner.com/worksheets/scientific_method_action.html - SciMethod_ppt_ptII 10 Grandma’s Favorite Bread 1 ½ cups warm water 1 package dry yeast 1 teaspoon salt 2 tablespoons sugar 2 tablespoons melted butter 3 ½ cups flour Mix all of the ingredients together, and knead well. Cover the dough and let it rise for 2 hours. Put the dough in a greased pan, and bake at 400°F for about 35 minutes Understanding Variables Malcolm used his grandmother’s recipe to bake a loaf of bread. Unfortunately, Malcolm’s bread collapsed while it was cooking. “Shucks!” he thought, “What could have gone wrong?” What could Malcolm change the next time he makes the bread? Two examples are given for you. 1) He could take the bread out of the oven sooner. 2) He could add more salt. 3) 4) Varying Your Variables A factor is anything in an experiment that can influence its outcome. A variable that is a factor in an experiment that can be changed is the manipulated variable. The changed variable is called the experimental variable or the independent variable (can change it independent of other variables). For example, because you can change the amount of salt in the bread recipe, the amount of salt is a variable. Malcolm’s grandmother suggested that he added too little flour or too much liquid. Therefore, Malcolm thought about changing one of the following three variables: • the amount of water • the amount of melted butter • the amount of flour In science class, Malcolm learned to change only one variable at a time. Discuss why you would only want to change one variable at a time. Why is that important? Scientists strive to perform controlled experiments. A controlled experiment tests only one factor at a time. In a controlled experiment, there is a control group and one or more experimental groups. All of the factors for the control group and the experimental groups are the same except for one. The one factor that differs is called the independent variable. Because the variable is the only factor that differs between the control group and the experimental group, scientists can be more certain that the changed variable is the cause of any differences that they observe in the outcome of the experiment. 11 Malcolm tried reducing the amount of water to 1 cup. Thus, he made the amount of water the changed variable. What factors did Malcolm control (remain constant)? (Hint: There are several of them! Refer to the recipe.) As it happened, Malcolm chose the right variable to change. With less water, the bread came out perfect, the outcome. He concluded that only 1 cup of water should be added. Inputs and Outputs The outcome describes the results of your experiment also called the dependent variable because it is changed in response to the independent variable. For instance, when you bake bread, the outcome is the quality of the loaf of bread. Often an outcome is something that you have to measure. Following is an example. Henry and Eliza conducted an experiment using plant fertilizer. They added different amounts of fertilizer to seven pots of bean sprouts. The pots were the same size and had the same type and amount of soil. They were given the same amount of seeds, light, and water. To find out how the fertilizer affected the growth of the sprouts, Henry and Eliza calculated the average height of the bean sprouts in each pot. Here are the factors in their experiment: Changed variable/Experimental variable/Independent variable: amount of fertilizer Controlled factors/Constant: size of pots, amount of light, amount of water, amount of soil, number of seeds Outcome/Dependent variable: average height of bean sprouts Your Turn Identify the changed variable, controlled factors, and outcomes in the following examples: 1. In a recent study, high school students were given a math exam after various amounts of sleep. One group slept 8 hours or more, and the second group slept fewer than 8 hours. The students had similar skills in math. They ate the same meals the previous day. The study results showed that students who slept 8 hours or more scored better on the exam, while students who slept less than 8 hours scored worse. Changed variable: Controlled factors: Outcome: 2. Our science club built a catapult out of craft sticks, glue, and a rubber band. We wanted to determine what size rubber band was best for launching a gumball across the classroom. If the rubber band was too small, the gumball wouldn’t travel very far. If it was too big, it would be too loose to work well. We found that a rubber band with a circumference of 11 cm shoots the gumball the farthest. Changed variable: Controlled factors: Outcome: 12 Output Sketch out an empty graph and label all the parts. Makeup your own data table with two variables and 5 trials, then explain the lab you did to get the data, identifying the independent, dependent, and controlled variables, and then graph the data. Describe the pattern the data showed. 13 14 15 Name:_______________________________ Date:__________ Block:____ Graphing Practice II Introduction Graphing is an important procedure used by scientists to display the data that is collected during a controlled experiment 2. Line graphs must be constructed correctly to accurately portray the data collected 3. Many times the wrong construction of a graph detracts from the acceptance of an individual’s hypothesis 4. A graph contains five major parts: a. Title b. The independent variable c. The dependent variable d. The scales for each variable 1. The title: depicts what the graph is about. By reading the title, the reader should get an idea about the graph. It should be a concise statement placed above the graph. The Independent Variable: is the variable that can be controlled by the experimenter. It usually includes time (dates, minutes, hours), depth (feet, meters), temperature (Celsius). This variable is placed on the X axis (horizontal axis). The Dependent Variable: is the variable that is directly affected by the independent variable. It is the result of what happens because of the independent variable. Example: How many oxygen bubbles are produced by a plant located five meters below the surface of the water? The oxygen bubbles are dependent on the depth of the water. This variable is placed on the Y-axis or vertical axis. The Scales for each Variable: In constructing a graph one needs to know where to plot the points representing the data. In order to do this a scale must be employed that include all the data points. This must also take up a conservative amount of space. It is not suggested to have a run on scale making the graph too hard to manage. The scales should start with 0 and climb based on intervals such as: multiples of 2, 5, 10, 20, 25, 50, or 100. The scale of numbers will be dictated by your data values. 5. Data are typically described in the following three ways: a. Mean b. Median c. Mode The Mean (AKA Average) for a group of variables: To determine the mean for a group of variables, divide the sum of the variables by the total number of variables to get an average. The Median for a group of variables: To determine median or “middle” for an even number of values, put the values in ascending order and take the average of the two middle values. e.g. 2, 3, 4, 5, 9, 10 Add 4+5 (2 middle values) and divide by 2 to get 4.5 The Mode for a group of variables: The mode for a group of values is the number that occurs most frequently. e.g. 2, 5, 8, 2, 6, 11 The number 2 is the mode because it occurred most often (twice) 16 Graph Title: _________________________________________________________ A bioengineering scientist has an experiment involving two kinds of plants and an aquatic field site that these plants are placed at varying depth. The data collected follows. 17 Procedure 1: Using the following data, answer the questions below and then construct a line graph. Depth in meters Number of Bubbles / minute Plant A Number of Bubbles / minute Plant B 2 29 21 5 36 27 10 45 40 16 32 50 25 20 34 30 10 20 1. What is the dependent variable and why? 2. What is the independent variable and why? 3. What title would you give the graph? . 4. What are the mean, median, and mode of all 3 columns of data? a). Depth : Mean____________Median__________Mode________ b). Bubble Plant A.: Mean ____________Median_________Mode________ c). Bubbles Plant B: Mean ____________Median_________Mode________ 18 19 Procedure 2: Diabetes is a disease affecting the insulin producing glands of the pancreas. If there is not enough insulin being produced by these cells, the amount of glucose in the blood will remain high. A blood glucose level above 140 for an extended period of time is not considered normal. This disease, if not brought under control, can lead to sever complications and even death. Answer the following questions concerning the data below and then graph it. Time After Eating hours 0.5 1 1.5 2 2.5 3 4 Glucose ml / Liter of Blood Person Glucose ml / Liter of Blood Person A B 170 180 155 195 140 230 135 245 140 235 135 225 130 200 1. What is the dependent variable and why? 2. What is the independent variable and why? 3. What title would you give the graph? 4. Which, if any, of the above individuals (A or B) has diabetes? 5. What data do you have to support your hypothesis? 6. If the time period were extended to 6 hours, what would the expected blood glucose level for Person B? 20 Summary: When writing your responses check to make sure you have included specific examples to support your position. 1. What conclusions can be determined from the data in graph 1? _______________________________________________________________________ _______________________________________________________________________ _______________________________________________________________________ _______________________________________________________________________ _______________________________________________________________________ _______________________________________________ 2. What conclusions can be determined from the data in graph 2? _______________________________________________________________________ _______________________________________________________________________ _______________________________________________________________________ _______________________________________________________________________ _______________________________________________________________________ _______________________________________________ 3. Can the data in each of these graphs be used to construct other types of graphs? _______________________________________________________________________ _______________________________________________________________________ ___________________________________________________________ 4. If so, what other graph types can be constructed? _______________________________________________________________________ _______________________________________________________________________ ___________________________________________________________ 21 Construct an explanation based on evidence for how carbon, hydrogen, and oxygen from sugar molecules may combine with other elements to form amino acids and/or other large carbon-based molecules. First write your thoughts on the lines provided. Dig deep. Then using your colored pencils sketch your ideas. You will have 20 minutes to accomplish both directives. A 10 minute bell will ring. _______________________________________________________________________ _______________________________________________________________________ _______________________________________________________________________ _______________________________________________________________________ _______________________________________________________________________ _______________________________________________________________________ _______________________________________________________________________ _______________________________________________________________________ _______________________________________________________________________ _______________________________________________________________________ _______________________________________________________________________ _______________________ 22 2 2 http://www.fda.gov/Food/GuidanceRegulation/GuidanceDocumentsRegulatoryInformation/LabelingNutrition/ucm385663.htm#Summary; downloaded 9/1/14 23 Nutrition Introduction Notes We eat food for two reasons: 1) 2) The source of energy for all food comes from the sun: Water and carbon dioxide in the atmosphere are fixed into useable food The organic (C containing) food we eat is classified as 1) 2) 3) Other needed materials 1) 2) 3) Enzymes break up food using other needed materials to make different proteins and other specialized macromolecules and cell structures (organelles) needed for cell growth and repair. 24 25 Review Questions – 1. What 6 elements make up the majority of the human body? 2. How many atoms are in a 70 kg human? 3. What element is most abundant in the human body? 4. What are macromolecules? 5. Use an example to explain the difference between a monomer and a polymer. 6. What are the monomers and polymers of protein? Give an example of a protein. 7. Looking at the amino acid diagram, what elements are found in an amino acid? 8. What are the monomers and polymers of carbohydrates? Give an example of a carbohydrate. 9. Looking at the monosaccharide diagram, what elements are found in a monosaccharide? 10. What are the monomers and polymers of lipids? Give an example of a lipid. 26 11. Looking at the fatty acid diagram, what elements are found in a fatty acid? Is this a saturated or unsaturated fatty acid 12. What are the monomers and polymers of nucleic acid? Give two examples of nucleic acids. 13. Looking at the nucleotide diagram, what elements are found in a nucleotide? 14. Compare and contrast hydrolysis and dehydration synthesis. Draw a diagram to demonstrate each process. 15. What do enzymes do? 16. What enzymes break down proteins? 17. What enzymes break down carbohydrates? 18. What enzymes break down lipids? 19. Using an example, explain how deficiencies in digestive enzymes can cause health issues. 27 1. Enzymes are biological ____________________ made of _____________________ and have _________________________ where substrates bind and the ______________ occurs. 2. Enzymes have optimum temperatures, pHs, and ionic concentration because these parameters effect the ___________________ of the enzyme. 3. Describe what is happening to enzyme activity in each of the following graphs a. c. b. d. 4. Identify the reactants, products, and reaction name for the following: 5. Macromolecules are composed of smaller subunits called __________________. 6. The two main types of bonds are ____________________ and ______________. 7. Which bond has shared electrons and is a stronger bond? 8. Which bond transfers electrons and can easily dissolve in water? 9. Lipids are also called __________________________ because they are made mostly of carbon and hydrogen atoms. 10. Some snake venoms are harmful because they contain enzymes that destroy blood cells or tissues. The damage caused by such a snakebite could best be slowed by a. applying ice to the bite area. c. inducing vomiting. b. drinking large amounts of water. d. increasing blood flow to the area. 28 Medieval Greek énzymos leavened Enzymes Review Enzymes break up food using other needed materials to make different proteins and other specialized macromolecules and cell structures (organelles) needed for cell growth and repair. : 29 30 There are four main classes of organic macromolecules: carbohydrates, lipids, proteins, and nucleic acids. These molecules are very large molecules that contain many carbon molecules linked together because carbon has four valence electrons and can form four covalent bonds. These enormous organic compounds are constructed by assembling together small molecular subunits, often in a chain or linear process that resembles the coupling of railroad cars onto a train. This coupling is referred to as dehydration synthesis (de = off, hydra = water, synthesis = to create), because it involves the production of water molecules as well as the larger molecule. Hydrogen and oxygen atoms are removed from the individual subunits so they can be joined together. Each subunit is called a monomer, and the macromolecule is referred to as a polymer. The reverse process, in which the polymer is disassembled into its individual monomers, is called hydrolysis (hydro = water, lysis = split) because the bonds that hold the monomers in a chain is split by the insertion of water molecules between the monomers. These monomers can be broken down and used for building blocks for other compounds. To break down (catabolism) or to synthesize (anabolism) enzymes are needed. Answer the following questions based on what you have learned in class already and the new vocabulary terms in bold from the reading above. 1. What are the four classes of organic macromolecules and monomers common in living organisms? 2. Macromolecules are also called . 3. Polymers are constructed from subunits called 4. When two or more monomers are joined together, addition to the polymer. . molecules are produced in 5. The chemical joining of two or more monomers is called . 6. When a macromolecule is broken down, water molecules are inserted at the bonds between the individual 7. . The reaction that splits a polymer is called . 31 Pepsin 32 33 Reinforcement Worksheet – Organic Compounds KEY CONCEPT: Carbon-based molecules are the foundation of life. Carbon atoms are the basis of most molecules that make up living things. Many carbon-based molecules are large molecules called polymers that are made of many smaller, repeating molecules called monomers. There are four main types of carbon-based molecules in living things. • Carbohydrates include sugars and starches, and are often broken down as a source of chemical energy for cells. Some carbohydrates are part of cell structure, such as cellulose, which makes up plant cell walls. • Lipids include fats and oils and, like carbohydrates, are often broken down as a source of chemical energy for cells. One type of lipid, called a phospholipid, makes up most of all cell membranes. • Proteins have a large number of structures and functions. Some proteins are needed for muscle movement; another protein, called hemoglobin, transports oxygen in blood. Another type of proteins, called enzymes, speed up chemical reactions in cells. • Nucleic acids are molecules that store genetic information and build proteins. DNA stores genetic information in cells, and RNA helps to build the proteins for which DNA codes. Type of Molecule Carbohydrate Functions Example Lipid Protein Nucleic Acid The prefix mono- means “one” and the prefix poly- means “many”. How are these meanings related to the terms monomer and polymer? __________________________________________________________________________________ __________________________________________________________________________________ Write your own analogy for the formation of a polymer from monomers. __________________________________________________________________________________ __________________________________________________________________________________ 34 NUTRITION AND METABOLISM All living organisms need energy and nutrients. The energy is used for many purposes, such as • synthesis → building more molecules • growth → making new cells to grow larger • repair → making new cells to mend injuries • locomotion → moving around in the environment The nutrients are also used for many purposes, such as • raw materials → the building blocks that new molecules and cells are built from • fuel → used to make energy in cell respiration Animals have to eat food to both make energy and get nutrients. When animals take in food, it’s called ingestion. When they breakdown the food, it’s called digestion. There are two types of digestion chemical and mechanical. When they take the food into their cells, it’s called absorption. Since they have to eat other organisms, animals are called heterotrophs. Hetero means “others”, troph means “feeding”, so heterotroph means “feeding on others”. Some organisms can harvest the energy from the sun and use it to synthesize the molecules and cells of their bodies. These organisms are plants. The process that allow plants to capture the sun and use it for synthesis is photosynthesis. Because, in this way, plants make their own food, they are also called autotrophs. Auto means “self”, troph means “feeding”, so autotroph means “self-feeding”. In photosynthesis, plants take in simple inorganic compounds (CO2 & H2O) and build organic nutrients such as sugars (C6H12O6) 1. Nutrition: Organisms take in nutrients (food) for various activities including: • _________________________________ • _________________________________ • _________________________________ • _________________________________ a. Ingestion: ______________________________________________________________ b. Digestion: ______________________________________________________________ •Nutrients must be broken down into smaller parts so that they can be ________________________ into the blood and cells of organisms to be used. Starches are digested into ______________________________________________ Proteins are digested into _______________________________________________ 2. Autotrophic Nutrition: a. Organisms take inorganic materials ( ______ & ______ ) and convert them into organic nutrients (__________________). b. Auto = ___________; troph = ___________ so Autotroph = _______________________ c. What process do autotrophs use to do this? ____________________________________ d. Examples of organisms that do this: __________________________________________ 3. Heterotrophic Nutrition: a. Organisms must __________________ nutrients made by other organisms. b. Hetero = ___________; troph = ___________ so Heterotroph = ____________________ c. Examples of organisms that do this: __________________________________________ d. These organisms include: • Carnivores: ___________________________________________________________ • Herbivores: ___________________________________________________________ • Ominivores: __________________________________________________________ • Decomposers: ________________________________________________________ 35 Chapter 2 Assessment Study Guide 1.Define each of the following, then write two sentences using the terms. A Element B Compound C Molecule D Bond 2 The smallest basic unit of matter is the -________________ 3 What is formed when an atom gains or loses electrons? 4 Atoms in molecules share pairs of electrons when they make ________________ 5 The attraction among molecules of different substances is called ______~ 6 A solution with a high concentration of H ions is called ____ 7 Which of the following solutions has the highest H ion concentration? A a solution with a pH of 1 B a solution with a pH of 4 C a solution with a pH of 7 D a solution with a pH of 10 What is the relationship between H ion concentration and acidity? 8 Which category of carbon-based molecules includes sugars and starches? What category of carbon-based molecules include meat? 9 What is unique about carbon? Identify four characteristics 10 The four main types of carbon-based molecules in organisms are carbohydrates, lipids, nucleic acids, and ___________________ 11 Identify the reactants in the following chemical reaction: 6H2O + 6CO2 → C6H12O6 + 6O2 12 Identify the products in this reaction: following chemical reaction: 6H2O + 6CO2 → C6H12O6 + 6O2 13 Chemical reactions that absorb more energy than they release are called _________________ 14 The activation energy needed for a chemical reaction is decreased by a _______________ 15 In the lock-and-key model of enzyme function shown in Figure 2.2, what is happening in step 2? 36 16. Identify the reactants and products, uncatalyzed and catalyzed reactions using the following diagram 17 Changes in temperature and pH can decrease an enzyme's activity changing __________________ 18 Which aspect of a chemical reaction is affected by enzymes? 19. Identify 3 properties of water that makes water essential for living things. Describe the properties 20. What type of intermolecular bonding relates to those properties? 21. Which diagram shows ionization? 22 How can you tell that an ionic bond is formed between magnesium and oxygen? 23 Remembering that electrons are negatively charged, is magnesium in part B positively or negatively charged? Why? 24 How would the illustration be different if magnesium and oxygen formed covalent bonds? 26. Ionic compounds are generally soluble in water. Figure 2.1 is showing the components of solution. What is A representing What is B representing. What were the clues you used to make the determination? 37 CALCULATING DIGESTION AND ABSORPTION RATES: The complexity, or density, of a macromolecule impacts the rate that it is digested and absorbed into the body. For example, egg protein takes less than 45 minutes to digest, while beef protein is complex and can take more than 4 hours to digest in the stomach. Once a macromolecule has been digested, the small monomers are able to diffuse through the small intestine directly into the bloodstream where they can be used. The following chart outlines the approximate digestion rate and absorption rate of common carbohydrates and proteins. Table 1. Digestion and Absorption Rates of Carbohydrates and Proteins Carbohydrate Absorption Rate Carbohydrate Digestion Rates Glucose 60 g/hour Fruit juice 0.25 hr Carrots, beets, 0.8 hr parsnips, turnips Protein Absorption Rates Watermelon 0.3 hr Corn, potatoes 1 hr Egg protein 2.9 g/hour Oranges, grapes 0.5 hr Brown rice, 1.5 hrs cornmeal, oats, peas, beans Milk protein 3.5 g/hour Apples, peaches, 0.6 hr Seeds 2 hrs cherries, pears Animal protein 10 g/hour Tomato, lettuce, 0.7 hr Nuts 3 hrs celery, spinach NOTE: Fats absorb the slowest Protein Digestion Rates and the rate varies GREATLY Fish 0.5 hr Turkey 2.2 hrs based on genetics and overall Egg 0.75 hr Lamb 3 hrs health, which is why we will Skim milk 1.5 hrs Beef 4 hrs only be calculating protein 2 hrs Pork 4.5 hrs and carbohydrate digestion Whole milk Chicken 2.1 hrs Cheese 5 hrs and absorption rates. a. An average human eats the following foods in a day. Determine the digestion rate, absorption rate, and total digestion time of each meal using the information from Table 1 (remember 1 g = 1 ml). The “Snack” has been completed for you as an example. Breakfast 38 Snack Lunch Dinner Dessert 8:00 am 10:30 am Scrambled eggs (60 grams) with cheese (20 g) Orange juice (150 ml) Almonds(40 g) +sunflower seeds (30 g) 12:00 pm 6:00 pm Chicken(100 g) & spinach salad (350 g) Apple juice (200 ml) 8:30 pm Beef steak(130 g) & baked potato(250 g)Skim milk (200 ml) Peach (75 g) + oat cobbler (115 g) Table 2. Meal Digestion, Absorption, and Elimination Rate Breakfast Total Amount (g) Digestion Rate (longest rate only) Absorption Rate (total g / absorp. rate) Time in Large Intestine Total Time (hours) Carbohydrates 36 hrs Proteins Snack Carbohydrates Proteins 70 g (40g + 30g) 3 hrs (nuts) 1.17 hrs (70g / 60g) 0 0 0 Total Amount Digestion Rate Absorption Rate (g) (longest rate only) (total g / absorp. rate) 36 hrs 39.17 hrs 0 Lunch Time in Large Intestine Total Time (hours) Carbohydrates Proteins 36 hrs Dinner Carbohydrates 36 hrs Proteins Dessert Carbohydrates 36 hrs Proteins b. c. d. e. Which meal took the longest to digest? Why? Which meal took the shortest time to digest? Why? What is actually occurring to carbohydrates and proteins during digestion? If the meal was eaten on Monday, what day and time would the dessert be eliminated from the body? 39 Macromolecules and Digestion HASPI Medical Biology Lab 07a Background/Introduction The Elements of Life Nearly 99% of the human body is made up of only 6 elements: oxygen, carbon, hydrogen, nitrogen, calcium, and phosphorous. Another 0.85% of the body is made up of 5 additional elements necessary for the body to function: potassium, sulfur, sodium, chlorine, and magnesium. The remaining 0.15% is filled by dozens of trace elements. A 70 kg human is made up of nearly 7x1027 atoms. More than 60% of those are hydrogen atoms, 25% are oxygen atoms, and 10% are carbon atoms. http://www.pc.maricopa.edu/Biology/rcotter/BIO%20205/LessonBuilders/Chapter%2 01%20LB/molecules.jpg Many of these atoms are bonded together to form important molecules such as water (H 2O), carbon dioxide (CO2), and oxygen (O2). The remaining atoms are bonded together to form complex structures that provide energy, support shape, and perform functions within the body. These are called macromolecules. The four main macromolecules include proteins, carbohydrates, lipids, and nucleic acids. Macromolecules are large polymers, meaning they are made up of many smaller parts. Those smaller parts are called monomers. Think Legos… A spaceship made from Legos would be the polymer, while each individual Lego piece used to create the spaceship would be a monomer. The atoms in each monomer are arranged differently to create a different polymer when they are bonded together. Proteins Proteins perform many major functions within the body, including performing chemical reactions as enzymes, communicating as hormones, and initiating movement in muscles just to name a few. The monomers of proteins are called amino acids. Amino acids are bonded together in long chains to create proteins, also called polypeptides. Proteins may be a few hundred amino acids long or hundreds of thousands of amino acids long. There are 20 different types of amino acids that can be bonded in different orders to create specific proteins. The basic structure of all amino acids is the same. Monomer Amino Acid Polymer Polypeptide Example Muscle Protein http://lifescience11.wikispaces.com/file/view/macromolecules.jpg/403148598/macromolecules.jpg 40 Carbohydrates The main function of carbohydrates is to provide energy. The monomers of carbohydrates are called monosaccharides. Monosaccharides are simple sugars that include fructose, sucrose, and glucose to name a few. Energy is stored in the bonds that create monosaccharides, and released during cellular respiration. monosaccharides are bonded together to form chains called polysaccharides. Polysaccharides are complex sugars that include starch, cellulose, and glycogen. Monomer Polymer Example Monosaccharide Polysaccharide Starch in Chloroplast Lipids http://lifescience11.wikispaces.com/file/view/macromolecules.jpg/403148598/macromolecules.jpg Lipids function to form membranes in cells, as hormones and vitamins, and as energy storage. The most common monomers of lipids are called fatty acids. Fatty acids can be saturated, meaning they are completely covered in hydrogen atoms, or unsaturated, meaning they have some double-bonds and still have some space available for hydrogen atoms to bond. Fatty acids can be bonded to other molecules such as glycerol and phosphates to form lipids. Examples of lipids include triglycerides and phospholipids. Monomer Polymer Example Fatty Acid Triglyceride Adipose Tissue Nucleic Acids http://lifescience11.wikispaces.com/file/view/macromolecules.jpg/403148598/macromolecules.jpg Nucleic acids contain the instructions for creating proteins within the body, and therefore are essential molecules for life. The monomers of nucleic acids are nucleotides. Every nucleotide contains 3 parts: a phosphate, a sugar, and a base. There are 5 different nucleotides: cytosine, guanine, adenine, thymine, and uracil. Nucleotides are bonded together to form the two major nucleic acids, DNA and RNA. The order of nucleotides in DNA determines the order of amino acids in the protein it creates. Monomer Polymer Example Nucleotide DNA or RNA Chromosome http://lifescience11.wikispaces.com/file/view/macromolecules.jpg/403148598/macromolecules.jpg Dehydration Synthesis and Hydrolysis The chemical reactions that bond together macromolecules 41 are similar and require water. When macromolecules are consumed, they must be broken down during digestion in order to be absorbed by the body. Polymers are bonded together with covalent bonds (shared electrons between atoms). To break this bond, water (H2O) molecules are split and used to fill the space created by the broken bond. This is called hydrolysis: “hydro“ means water, and “lysis” means to split apart. Once a polymer has been broken apart and the monomers have been absorbed, they may need to be bonded back together to form new polymers within the body. To allow the bond between monomers, a hydrogen (H) atom and a hydroxide (OH) molecule are removed from the ends of each monomer. When these are removed, it creates a spot for the two monomers to form a covalent bond with each other; thus the H and OH come together to form a water (H2O) molecule. This is called dehydration synthesis: “dehydration” means losing water, and “synthesis” means to create. http://classconnection.s3.amazonaws.com/739/flash cards/850739/jpg/05_02_polymers-l1326646861804.jpg Digestion: Enzymes The digestive system consists of a group of organs that produce enzymes and substances that assist in digesting food, as well as a long tract that starts at the mouth and ends at the anus. The function of the digestive system is to break down and absorb food, which is made up primarily of macromolecules. Enzymes that break down specific macromolecules are produced in different parts of the digestive tract. An enzyme is a protein substance that speeds up chemical reactions in the body by lowering the activation by providing an alternative pathway. Proteins and Proteases Proteases are enzymes that break down protein. There are two main types of proteases in the digestive system. Pepsin is produced in the stomach, and is most effective in a very acidic pH. For this reason the stomach also produces hydrochloric acid that creates a very acidic pH. Trypsin is another protease produced by the pancreas for protein digestion in the small intestine. http://www.pc.maricopa.edu/Biology/rcotter/BIO%20205/LessonBuilders/ Chapter%207%20LB/activesite.jpg Carbohydrates and Amylase The enzyme that breaks down carbohydrates is called amylase. Amylase can be found in the saliva and is produced by the pancreas for carbohydrate digestion in the small intestine. Lipids and Lipase The enzyme that breaks down lipids is called lipase. Lipase is produced by the pancreas for lipid digestion in the small intestine. Lipids tend to stick together and are difficult for lipase to separate. Bile is produced by the liver to emulsify, or break apart, the lipids so lipase can work faster. Digestive Enzyme Deficiencies If macromolecules are not digested correctly, it can impact an individual’s health, even if he or she is eating healthy and exercising. Deficiencies in the enzymes that break down 42 macromolecules can occur due to a variety of factors such as environmental pollution, stress, hormone imbalance, or genetic mutations (hereditary). Protease Deficiencies A deficiency in protease can lead to an inability of the body to digest and absorb proteins properly. Improper digestion of proteins can lead to a variety of problems, including but not limited to anxiety, arthritis, osteoporosis, bone spurs, hypothyroidism, dehydration, colitis, colon cancer, and chronic infections. Amylase Deficiencies A deficiency in amylase can lead to an inability of the body to digest and absorb carbohydrates properly. Improper digestion of carbohydrates can lead to a variety of problems, including but not limited to fatigue, abscesses, psoriasis, eczema, hives, dermatitis, asthma, emphysema, phosphorous deficiency, gastritis, joint stiffness, and high blood pressure. Lipase Deficiencies A deficiency in lipase can lead to an inability of the body to digest and absorb lipids properly. Improper digestion of lipids can lead to a variety of problems, including but not limited to high cholesterol, obesity, diabetes, heart disease, muscle spasms, spastic colon, and vertigo. Review Questions – answer questions on a separate sheet of paper 1. 2. 3. 4. 5. 6. 7. 8. What 6 elements make up the majority of the human body? How many atoms are in a 70 kg human? What element is most abundant in the human body? What are macromolecules? Use an example to explain the difference between a monomer and a polymer. What are the monomers and polymers of protein? Give an example of a protein. Looking at the amino acid diagram, what elements are found in an amino acid? What are the monomers and polymers of carbohydrates? Give an example of a carbohydrate. 9. Looking at the monosaccharide diagram, what elements are found in a monosaccharide? 10. What are the monomers and polymers of lipids? Give an example of a lipid. 11. Looking at the fatty acid diagram, what elements are found in a fatty acid? 12. What are the monomers and polymers of nucleic acid? Give an example of a nucleic acid. 13. Looking at the nucleotide diagram, what elements are found in a nucleotide? 14. Compare and contrast hydrolysis and dehydration synthesis. Draw a diagram to demonstrate each process. 15. What do enzymes do? 16. What enzymes break down proteins? 17. What enzymes break down carbohydrates? 18. What enzymes break down lipids? 19. Using an example, explain how deficiencies in digestive enzymes can cause health issues. 43 Macromolecules and Digestion HASPI Medical Biology Lab 07a Part A: Building Macromolecules Our bodies are amazing machines capable of breaking down and building up complex molecules required for life. Since these molecules are microscopic, it is easier to understand how they are built using models. In this part of the activity, your team will be modeling dehydration synthesis and hydrolysis to obtain a better understanding of these processes before investigating digestion. Materials Velcro dots black (10) Velcro dots white (10) Macromolecule template Scissors Procedure/Directions Your lab team will be given tasks, or directions, to perform on the left. Record your questions, observations, or required response to each task on the right. Set Up Task 1 2 Use scissors to cut out all of the objects on the macromolecule template. Cut the black and white Velcro dots into quarters (4 sections from each dot; see image). The outlined circles on each atom or molecule identify a 3 spot for part of a Velcro dot. On the WHITE outlined circles, peel and stick a white 4 Velcro section onto the FRONT of the atom/molecule. On the CLEAR outlined circles, peel and stick a black 5 Velcro section onto the BACK of the atom/molecule. There will be extra black and white Velcro dot sections. 6 Save these in case any dots come loose. 44 Response Proteins Task 1 2 3 4 Put the 4 amino acid molecules, 4 oxygen atoms, and 8 hydrogen atoms on the table. Push all of the other items to the side. Each of the black Velcro dot sections will attach to the white Velcro dot sections. The Velcro represents bonds between molecules. To form a polypeptide chain, attach each amino acid molecule to each other between the carbon and nitrogen atoms. There cannot be any open bonds (Velcro), so it is necessary to bond an oxygen and hydrogen to the ends of the polypeptide chain (see image). Response a. What are the monomers of protein? b. What does the Velcro represent? Water is also needed for hydrolysis, so use the remaining oxygen and hydrogen atoms to create 3 water molecules (see image). Hydrolysis of Proteins 5 6 7 8 9 When the body needs to break down protein, it splits the bond between each amino acid molecule, and splits water to fill the bonds. To perform hydrolysis on your polypeptide chain, break a bond (separate the Velcro) between two of the amino acid molecules. Break the bond between one of the hydrogen atoms and oxygen on the water molecule. The hydrogen atom bonds to the nitrogen atom, and the OH bonds to the carbon atom. Repeat steps 6-8 on the remaining amino acids. Dehydration Synthesis of Proteins The body uses the amino acids it has broken down to build 10 proteins needed for the body to function correctly. This is the opposite of hydrolysis. Remove the hydrogen atom from the nitrogen of one amino acid molecule, and an OH 11 molecule from the carbon of a different amino acid molecule. 12 Bond the carbon and nitrogen atoms to each other. Notice you have a hydrogen atom and an OH molecule 13 remaining. Bond these together to form a water molecule. Repeat steps 11-13 for the remaining amino acid molecules. 14 Macromolecules and Digestion, HASPI Medical Biology Lab 07a 45 Carbohydrates Task 1 2 3 4 5 a. List two monomers of carbohydrates. Put the 4 glucose molecules, 8 oxygen atoms, and 8 hydrogen atoms on the table. Push all of the other items to the side. Each of the black Velcro dot sections will attach to the white Velcro dot sections. The Velcro represents bonds between molecules. To form a carbohydrate chain, connect each glucose molecule with an oxygen atom. There cannot be any open bonds (Velcro), so it is necessary to bond an oxygen and hydrogen to the ends of the carbohydrate chain (see image). Carbohydrate chains can be thousands of sugar molecules long. Water is also needed for hydrolysis, so using the remaining oxygen and hydrogen atoms create 3 water molecules (see image). When carbohydrates are consumed, they must be broken down into individual sugar molecules to be used to create energy in cellular respiration. Hydrolysis of Carbohydrates 6 7 8 9 10 11 When the body needs to break down carbohydrates, it splits the bond between each sugar molecule, and splits water to fill the bonds. To perform hydrolysis on your carbohydrate chain, break a bond (separate the Velcro) between two of the glucose molecules. Break the bond between one of the hydrogen atoms and oxygen on the water molecule. One of the glucose molecules should still have an oxygen atom attached. Bond the hydrogen atom that you split from the water molecule to this oxygen atom. Bond the OH molecule remaining from water to the remaining open bond on the glucose molecule (see image). Repeat steps 7-10 for the two remaining bonds on the carbohydrate chain. Dehydration Synthesis of Carbohydrates 12 13 14 15 16 46 Response If the body has excess sugar, it can bond sugar together and store it for later use. This is the opposite of hydrolysis. Remove the hydrogen atom from the right side of one glucose molecule, and an OH molecule from the left side of a different glucose molecule. Bond the remaining oxygen atom that is attached to glucose to the other glucose molecule. Notice you have a hydrogen atom and an OH molecule remaining. Bond these together to form a water molecule. Repeat steps 13-15 for the two remaining glucose molecules. You should end up with a carbohydrate chain and 3 waters. Nucleic Acids Task 1 2 3 4 5 Response a. What are the monomers of nucleic acids? Put the 4 nucleotides, 8 oxygen atoms, and 8 hydrogen atoms on the table. Push all of the other items to the side. Each of the black Velcro dot sections will attach to the white Velcro dot sections. The Velcro represents bonds between molecules. To form a nucleic acid (DNA), attach each nucleotide to one another using an oxygen atom between the sugar and phosphate (see image). There cannot be any open bonds (Velcro), so it is necessary to bond an oxygen and hydrogen to the ends of the nucleic acid (see image). Water is also needed for hydrolysis, so using the remaining oxygen and hydrogen atoms create 3 water molecules. Hydrolysis of Nucleic Acids 6 7 8 9 When the body needs to break down nucleic acids, it splits the bond between each nucleotide, and splits water to fill the bonds. To perform hydrolysis on your nucleic acid, break a bond (separate the Velcro) between nucleotides. Leave the oxygen attached to one of the nucleotides. Break the bond between one of the hydrogen atoms and oxygen on the water molecule. The hydrogen atom bonds to the remaining oxygen on a nucleotide, and the OH bonds to the other nucleotide. Repeat steps 7-9 on the remaining nucleotides. 10 Dehydration Synthesis of Nucleic Acids Nucleotides are bonded together to form nucleic acids, which 11 include DNA and RNA. This is the opposite of hydrolysis. Remove an OH molecule from one 12 nucleotide, and a hydrogen atom from a different nucleotide. 13 Bond the nucleotides to each other using the oxygen atom. Notice you have a hydrogen atom and an OH molecule remaining. 14 Bond these together to form a water molecule. Macromolecules and Digestion, HASPI Medical Biology Lab 07a 47 Repeat steps 12-14 for the remaining nucleotide molecules. 15 Lipids Task 1 2 3 4 Hydrolysis of Lipids 5 6 7 8 When the body needs to break down lipids, it splits the bond between fatty acid molecules, and splits water to fill the bonds. To perform hydrolysis on your lipid, break a bond (separate the Velcro) between a fatty acid and glycerol. Leave the oxygen attached to glycerol. Break the bond between one of the hydrogen atoms and oxygen on the water molecule. The hydrogen atom bonds to the remaining oxygen on glycerol, and the OH bonds to the fatty acid. Repeat steps 6-8 on the remaining fatty acids. 9 Dehydration Synthesis of Lipids Fatty acids and glycerol are bonded together to form 10 lipids, or fats. 11 12 13 14 48 Response a. What are the monomers of lipids? Put the 3 fatty acid molecules, glycerol molecule, 6 oxygen atoms, and 6 hydrogen atoms on the table. Push all of the other items to the side. Each of the black Velcro dot sections will attach to the white Velcro dot sections. The Velcro represents bonds between molecules. To form a lipid, attach each fatty acid molecule to the glycerol molecule using an oxygen atom (see image). Water is also needed for hydrolysis, so using the remaining oxygen and hydrogen atoms create 3 water molecules. This is the opposite of hydrolysis. Remove the OH molecule from the fatty acid molecule, and the hydrogen atom from the glycerol. Bond the fatty acid and glycerol molecules to each other using the oxygen atom. Notice you have a hydrogen atom and an OH molecule remaining. Bond these together to form a water molecule. Repeat steps 11-13 for the remaining fatty acid molecules. Analysis & Interpretation Answer the following questions using data from your lab AND internet research if needed. Analysis Questions – answer questions on a separate sheet of paper 1. 2. 3. 4. 5. 6. 7. What is the difference between a monomer and a polymer? Make a table listing the monomers and polymers of proteins, carbohydrates, lipids, and nucleic acids. What is the purpose of hydrolysis? What is the purpose of dehydration synthesis? Explain hydrolysis using a diagram. Explain dehydration synthesis using a diagram. Based on what you have learned about hydrolysis and dehydration synthesis, why do you think water is so important to the body? Macromolecules and Digestion, HASPI Medical Biology Lab 07a 49 Macromolecules and Digestion HASPI Medical Biology Lab 07b Part B: Digestion, Macromolecules, and Enzymes When we eat, we consume macromolecules, vitamins, and minerals needed for our body to function normally. When macromolecules are consumed, it is necessary to break them down into smaller monomers to use them. Carbohydrates are broken down into simple sugars, such as glucose, that are used to create energy in cellular respiration. Proteins are broken down into amino acids that are then rearranged during translation to make proteins important to the body, such as insulin. Lipids are broken down into fatty acids and glycerol. Fatty acids are used to build essential cell organelles, like the cell membrane. Nucleic acids are also broken down into individual nucleotides that are used for DNA replication and transcription. Breaking down these macromolecules would be EXTREMELY slow without enzymes to speed up the reaction. In this lab, your team is going to observe how enzymes can break down carbohydrates, proteins, and lipids into smaller pieces. Materials Spot plate 6 pH strips/indicator sheet 12 Toothpicks (stirrers) Food sample Protein solution Starch solution Lipid solution Protease solution Lipase solution Amylase solution Iodine potassium iodide Biuret solution 1% HCl solution Soap solution Paper towels 50 Procedure/Directions Your lab team will be given tasks, or directions, to perform on the left. Record your questions, observations, or required response to each task on the right. Set Up Task 1 2 3 4 Response Obtain a spot plate, 12 toothpicks, 6 pH strips, a pH Figure A indicator sheet, a pencil, and paper towels. Cut or tear the pH strips in half length-wise. 3 Using a pencil, label the wells 1-3 across the side, and with a “C”, “L”, “P”, and “F” across the bottom/top 2 (see Figure A). The C row represents the Carbohydrates tests, the L 1 row represents the Lipids tests, the P row represents C L P F the Proteins tests, and the F row represents Food test. All of the solutions have been placed at a central location. You will need to take your spot plate to that location to collect each solution when the task directs you to do so. Each solution may be in a dropper bottle, or there may be plastic pipettes available. a. What is the purpose of this lab? 5 b. What are monomers and polymers? Explain how you will be observing monomers and polymers in this lab investigation. Part A: Carbohydrate Digestion Task 1 2 3 4 5 Add 15 drops of Starch solution to wells 1 and 2 in row C. Add 5 drops of Amylase to well 2. Amylase is an enzyme that breaks down starch--a carbohydrate--into smaller sugars. Using separate stirring sticks, mix each well. Allow the wells to sit for 5 minutes. Add 1 drop of Iodine potassium iodide to wells 1 and 2. Potassium iodine turns blue/black in the presence of starch. If amylase has broken down the starch into smaller sugars, the potassium iodine will have a much lighter reaction. Response c. What enzymes break down carbohydrates? Iodine Potassium Iodide Results Well 1 Results: Well 2 Results: d. What is the monomer of carbohydrates? In which well, if any, were you able to observe amylase breaking down carbohydrates? 6 e. What was the purpose of well 1? f. Explain your results. Macromolecules and Digestion, HASPI Medical Biology Lab 07a 51 Part B: Lipid Digestion Task 1 2 3 4 5 6 7 8 9 Response Add 10 drops of water to wells 1-3 in row L. Add 3 drops of Lipid solution to wells 1-3 in row L. Add 5 drops of Lipase to wells 2 and 3. Lipase is an enzyme that breaks down lipids. Add 2 drops of soap to well 3. Soap is an emulsifier, which means that it does not break the bonds between lipids, but instead separates them from other lipids making it easier for lipase to break them down. In the body, bile produced by the liver acts as the emulsifier. Using separate toothpicks, mix each well. Test the pH of wells 1-3 using the pH strips. Allow the wells to sit for 20 minutes. After 20 minutes, retest the pH of each well. If the lipase has been effective, the pH of the solution should decrease. g. What enzymes break down lipids? Before Digestion pH Well 1 pH: Well 2 pH: Well 3 pH: After Digestion pH Well 1 pH: Well 2 pH: Well 3 pH: h. What is the monomer of lipids? In which well, if any, were you able to observe lipase breaking down lipids? i. What was the purpose of well 1? j. Explain your results Part C: Protein Digestion Task 1 2 3 4 5 6 7 8 Add 5 drops of the Protein solution to wells 1-3 in row P. Add 5 drops of Protease to wells 2 and 3. Protease is an enzyme that breaks down proteins. In the stomach, the protease enzyme is called pepsin. Add 5 drops of 1% HCl to well 3. Pepsin works best in an acidic environment. In the stomach, hydrochloric acid (HCl) is produced to make pepsin more effective at breaking down proteins into amino acids. Using separate toothpicks, mix each well. Test the pH of wells 1-3 using the pH strips. Allow the wells to sit for 5 minutes. After 5 minutes, add 2 drops of Biuret to wells 1-3. If the protein has been broken down into amino acids, the biuret will turn pink. If it has not, the biuret will remain blue/purple. Response k. What enzymes break down proteins? Before Digestion pH Well 1 pH: Well 2 pH: Well 3 pH: Biuret Results Well 1 Results: Well 2 Results: Well 3 Results: l. What is the monomer of proteins? In which well, if any, were you able to observe protease breaking down proteins? m. What was the purpose of well 1? n. Was there any difference in digestion between the well with protease and the well with protease + 1% HCl? Why do you think this happened? o. Explain your results. 52 Part D: Macromolecules in Food Task 1 2 3 4 Choose any food item that easily mixes in water. You may need to smash the food sample in order to have it mix easily. In a beaker, mix a small amount of your food sample with 10 ml of water. Using a plastic pipette, add 5 drops of the food solution to wells 1-3 in row F. Dip a pH strip into one of the wells. Record the pH of your food solution. TEST FOR PROTEIN Add 5 drops of protease and 5 drops of 1% HCl 5 to well 1. 6 Use a toothpick to stir the well. Allow well 1 to sit for 5 minutes to give the 7 protease time to break down any proteins that are present. After 5 minutes, add 2 drops of Biuret. The 8 solution will turn pink if protein is present. TEST FOR CARBOHYDRATES 9 Add 1 drop of iodine potassium iodide to well 2. 10 Use a toothpick to stir the well. If there are carbohydrates present, well 2 will 11 turn blue/black. TEST FOR LIPIDS Add 5 drops of lipase and 2 drops of soap to 12 well 3. Mix the solution. 13 Use a toothpick to stir the well. 14 Test the pH of the solution. Allow well 3 to sit for 20 minutes to allow the 15 lipase and soap time to break down any lipids that are present. After 20 minutes, retest the pH of the solution. 16 If the lipase has been effective, the pH of the food solution should decrease. Response p. What food item did you choose? q. Hypothesize which macromolecules your food item contains: Food pH: r. Are proteins present in the food sample? s. Are carbohydrates present in the food sample? pH Results Well 4 pH BEFORE: Well 4 pH AFTER: t. Are lipids present in the food sample? Macromolecules and Digestion, HASPI Medical Biology Lab 07a 53 Analysis & Interpretation Answer the following questions using data from your lab AND internet research if needed. Analysis Questions – answer questions on a separate sheet of paper 1. What are the 4 main macromolecules? What are the monomers of each of the 4 macromolecules? 2. Explain how enzymes work, and give two examples of enzymes. 3. What type of macromolecules are enzymes? 4. What does amylase do? 5. Explain how the lab was able to determine whether amylase was effective. 6. What does lipase do? 7. What is the purpose of using soap for lipid digestion? 8. Explain how the lab was able to determine whether lipase was effective. 9. What does protease do? 10. Why was 1% HCl combined with protease for protein digestion? 11. Explain how the lab was able to determine whether protease was effective. 12. What types of macromolecules were in your food sample? Connections & Applications Your instructor may assign or allow you to choose any of the following activities. As per NGSS/CCSS, these extensions allow students to explore outside activities recommended by the standards. 1. CREATE A DIGESTIVE DISORDER POSTER OR BROCHURE: There are a variety of disorders that can impact the breakdown and absorption of macromolecules in the digestive system. Research and create a poster or brochure that includes the following information: a. A disorder that affects how proteins are broken down or absorbed. i. Explanation of the disorder ii. Symptoms and treatment options iii. Prevalence (how many people suffer from this disorder) iv. At least one image, diagram, table, or graph supporting the information b. A disorder that affects how carbohydrates are broken down or absorbed. i. Explanation of the disorder ii. Symptoms and treatment options iii. Prevalence (how many people suffer from this disorder) iv. At least one image, diagram, table, or graph supporting the information c. A disorder that affects how lipids are broken down or absorbed. i. Explanation of the disorder ii. Symptoms and treatment options iii. Prevalence (how many people suffer from this disorder) iv. At least one image, diagram, table, or graph supporting the information d. NO PLAGIARISM WILL BE TOLERATED! Cite all of your sources using a bibliography. In any writing process, it is important to revisit your work and is often useful to have others help in 54 the editing process. For this project, create a rough draft and ask a parent, classmate, sibling, or teacher to edit the rough draft. Have the editor write any corrections or suggestions on your rough draft. Revise and rewrite your poster/brochure using the suggested edits. Turn in both your rough draft and the final draft. 2. INVESTIGATE DIET SUPPLEMENTS: Certain diet supplements claim to be able to block the digestion of lipids and carbohydrates so they cannot be absorbed into the blood. Some of these supplements do this by actually blocking the enzymes that would normally break down lipids and carbohydrates into smaller monomers. Research the following questions and write an informational report on your findings. a. Explain how fat blockers and starch blockers work. b. Choose 1 example of a fat blocker supplement and 1 example of a starch blocker supplement. For each supplement, determine exactly how they “block” fats/starches. c. Determine what company creates and sells each supplement. Read the information for each supplement provided by the company that makes the supplement. Research and find an external site that has reviewed the supplement. Compare the following between the two sites: i. Ingredients of the supplement ii. Results that an individual will have taking the supplement iii. Negative side effects iv. Are there any inconsistencies between the company site and the external site? d. NO PLAGIARISM WILL BE TOLERATED! Cite all of your sources using a bibliography. Macromolecules and Digestion, HASPI Medical Biology Lab 07a 55 3. CALCULATING DIGESTION AND ABSORPTION RATES: The complexity, or density, of a macromolecule impacts the rate that it is digested and absorbed into the body. For example, egg protein takes less than 45 minutes to digest, while beef protein is complex and can take more than 4 hours to digest in the stomach. Once a macromolecule has been digested, the small monomers are able to diffuse through the small intestine directly into the bloodstream where they can be used. The following chart outlines the approximate digestion rate and absorption rate of common carbohydrates and proteins. Table 1. Digestion and Absorption Rates of Carbohydrates and Proteins Carbohydrate Absorption Carbohydrate Digestion Rates Rate Glucose 60 g/hour Fruit juice 0.25 hr Carrots, beets, 0.8 hr parsnips, turnips Protein Absorption Rates Watermelon 0.3 hr Corn, potatoes 1 hr Egg protein 2.9 g/hour Oranges, grapes 0.5 hr Brown rice, 1.5 hrs cornmeal, oats, peas, beans Milk protein 3.5 g/hour Apples, peaches, 0.6 hr Seeds 2 hrs cherries, pears Animal protein 10 g/hour Tomato, lettuce, 0.7 hr Nuts 3 hrs celery, spinach NOTE: Fats absorb the Protein Digestion Rates slowest and the rate varies Fish 0.5 hr Turkey 2.2 hrs GREATLY based on genetics Egg 0.75 hr Lamb 3 hrs and overall health, which is Skim milk 1.5 hrs Beef 4 hrs why we will only be Whole milk 2 hrs Pork 4.5 hrs calculating protein and 2.1 hrs Cheese 5 hrs carbohydrate digestion and Chicken absorption rates. b. An average human eats the following foods in a day. Determine the digestion rate, absorption rate, and total digestion time of each meal using the information from Table 1 (remember 1 g = 1 ml). The “Snack” has been completed for you as an example. Breakfast 8:00 am Snack 10:30 am Lunch 12:00 pm Dinner 6:00 pm Dessert 8:30 pm Scrambled eggs (60 grams) with cheese (20 g) Orange juice (150 ml) Almonds (40 g) and sunflower seeds (30 g) Chicken (100 g) & spinach salad (350 g) Apple juice (200 ml) Beef steak (130 g) & baked potato (250 g) Skim milk (200 ml) Peach (75 g) and oat cobbler (115 g) Table 2. Meal Digestion, Absorption, and Elimination Rate Breakfast Total Amount (g) Digestion Rate (longest rate only) Absorption Rate (total g / absorp. rate) Carbohydrates Time in Large Intestine Total Time (hours) 36 hrs Proteins Snack Carbohydrates Proteins 56 70 g (40g + 30g) 0 3 hrs (nuts) 0 1.17 hrs (70g / 60g) 0 36 hrs 39.17 hrs 0 Lunch Total Amount (g) Digestion Rate (longest rate only) Absorption Rate (total g / absorp. rate) Time in Large Intestine Carbohydrates Total Time (hours) 36 hrs Proteins Dinner Carbohydrates 36 hrs Proteins Dessert Carbohydrates 36 hrs Proteins b. c. d. e. Which meal took the longest to digest? Why? Which meal took the shortest time to digest? Why? What is actually occurring to carbohydrates and proteins during digestion? If the meal was eaten on Monday, what day and time would the dessert be eliminated from the body? Resources & References NIH. 2008. Your Digestive System and How it Works. National Digestive Diseases Information Clearinghouse, NIH Publication No. 08-2681. www.digestive.niddk.nih.gov. Wyatt. 2005. Western Kentucky University, Bio 113 Nutrition, http://bioweb.wku.edu/courses/BIOL115/Wyatt/Nutrition/nutrition.asp. Macromolecules and Digestion, HASPI Medical Biology Lab 07a 57