ENVI 265: Introduction to Methods in Environmental Studies Reporting University of Alaska Fairbanks College of Rural and Community Development Course Syllabus Course Title: Dept. & Num: Credits: Prerequisites: Introduction to Methods in Environmental Studies Reporting ENVI 265 2 (1.5 + 0 + 1.5) ENVI 101 or NRM101, ENVI 110, ENVI 260 AND a 100 level labbased science course OR permission of instructor TBA TBA Distance education Dr. Todd Radenbaugh TBA 907.842.5109 or 1.800.478.5109 907.842.5692 bftar@uaf.edu Dates: Days and Times: Location: Instructor: Hours Available: Phone: Fax: Email: Text: Northey, M. and D. B. Knight. 2006. Making Sense: A Students Guide to Research and Writing in Geography and the Environmental Sciences, third edition Oxford University Press. Course Description Introduces basic data collection methods used in environmental studies then concentrates on research skills necessary to analyze, interpret, and document field and laboratory data and the technical reporting processes. The course is designed to integrate raw environmental data into a technical report that can be presented in scientific meeting format. Goals Upon completion of this course, students will: Design a research project proposal in environmental studies Understand the concepts of interdisciplinary data analysis and interpretation for ecological sciences Write a complete scientific report using actual data collected in the field Present research finding in a scientific meeting format Capstone research report: This is a core course for the ENVI certificate and is part of a three course series beginning with ENVI 101 (Introduction to Environmental Science) and continuing with ENVI 260. Upon completion of these three courses, students will have completed a capstone research project, a key assessed outcome. In the project students are required to collect and analyze data then present results in a scientific format. This type of training is important in rural areas where environmental monitoring is done by federal, tribal, state, and local agencies. In the course individuals will be required to understand and participate in data analysis and relate results to the local and regional outlets. Student Learning Outcomes/Objectives: Students will demonstrate an understanding of science research methods by completing the following: Use the scientific method and critical thinking to understand environmental problems and discoveries Environmental Science Research Methods 1 Collect and interpret quantitative scientific data Employ basic statistical analysis to quantify data into results Create relevant figures and tables of scientific data Be able to prepare a technical report Develop effective oral and poster presentations Instructional Methods: Distance delivery – The major purpose of this course is for the student to analyze data and writing chapters that will culminate in a final technical report. The instructor will work individually with each student through every step of this process to ensure understanding and completion. Students will have deadlines throughout the semester for review of data analysis and draft editing. In addition to this report, students will present their findings to the class in a scientific conference-like setting. There may be additional opportunities for students to present their findings at statewide or regional scientific conferences. Student Course Resources: The class will meet using ELive each week for three hours for the first nine weeks of the semester. The Blackboard website for this course will also be used for posting assignments, instructions, additional reading material and resources, and class notes. Use your three greatest resources to succeed in this course: o Your text and handouts – read all assigned material before the lecture o Your fellow students – it is strongly encouraged to interact among your classmates: students can meet face to face if in the same community or form study groups by email or phone o Your instructor – call or email your instructor if you have any questions, concerns or trouble understanding the material. The instructor welcomes the interaction from students and will be glad for the contact. Course Calendar NOTE: The data collected from ENVI 260 will be used in this course as the subject for the written technical report. However, if for some reason, when a student completes ENVI 260 and there is no data to analyze or write-up, then a mock data set will be provided for the student to analyze and write into the technical report for this course. Each week a specific section of the technical report will be discussed and due. Students are encouraged to complete each week’s assigned section early and turn in for comments. Assignments turned in by the due date will be returned to students for revisions to improve their final grade. Since each section builds on the last, it is important to meet these deadlines. We will work collaboratively on ELive on each assigned section, so having them completed on time is important. The instructor will also work individually with each student through every step of this process to ensure understanding and completion of each of the report sections. Week 1 Class One Review objectives and materials from ENVI 260 Outline the Technical Report and Presentation assignments What is the technical report, how is it used in agencies and the scientific community and elsewhere, how reports are used in environmental studies Class Two Environmental Science Research Methods 2 Reviewing literature search performed in ENVI 260 Selecting and evaluating the literature search How to cite literature in your report Formatting your References section Week 2 Class One – References section due Go over questions or problems with the References section Organizing data and materials before writing Development of your ideas - outlining Class Two Writing the Introduction section – introducing the general topic, incorporating the literature review, placing your project topic in context of what has already been published (what variables are you considering?), highlighting the objective of your study. Week 3 Class One – Introduction section due Go over questions or problems with the Introduction section Writing the Methods section – describing methods for repeatability, what information needs to be included (location, organisms, experimental design, variables, statistical tests and why they were used), use of correct tense for writing style Class Two Types of data – qualitative, quantitative, categorical Introduction to basic statistics – sum, mean, median, mode, percentiles, frequency, range, standard deviations Week 4 Class One – Methods section due Go over questions or problems with the methods section Analyzing and manipulating data using Excel spreadsheets – instructor will use Excel and mock data to demonstrate how to perform basic statistical analysis Class Two Using data and analysis results in Excel to create graphs and figures -- instructor will use Excel and mock data to demonstrate how to create graphs and figures Week 5 Class One Writing the Results section – how to describe and summarize your data, how to summarize results of statistical tests, referring to tables and figures, listing data Class Two Putting and formatting tables, and figures in your report – numbering and labeling, units of measurement, captions and legends, stand alone information Deciding how many and which tables and figures to include in your report Week 6 Class One – Results section with tables and figures due Environmental Science Research Methods 3 Go over questions or problems with the Results section Writing the Discussion section – interpreting and evaluating your results, explaining reasons why or why not your data support your predictions, discussing limitations of methods or data, how to integrate relevant literature for purposes of comparing your results, making suggestions for further study, writing the take-home message. Class Two Continuation on writing the Discussion section from Class One Catch-up and/or review session Week 7 Class One – Discussion section due Go over questions or problems with the Discussion section Title page – writing a title for your report, function of the title page, how to write a good title, author information Abstracts – what is an abstract, how it is used, why is it written last Class Two General formatting issues of your technical report to include in the rough draft – order of sections, font and spacing size, page numbering, scientific names, spelling, grammar, paragraph construction, etc. Common problems found among technical report writings (what not to do!) Proofreading and revising your own paper How to make use of other reviewers’ suggestions Week 8 Class One – Rough Draft of entire report due Go over questions or problems with any sections of the report Style and accuracy in the final draft Visual aids to communication o Introduction to using and creating slides in PowerPoint for presentation of tables and/or figures or text for the students’ presentation (3 visual aids must be included in your presentation). Class 2 Continue with visual aid creation instruction using PowerPoint The oral presentation o Ways to present sampling data, preparing yourself, preparing which material to present, timing, coordinating with the visual aids, transition between slides and/or topics, practicing for a peer review Week 9 Final Draft due on the last day of class Class One Presentations of your Technical Report Class Two Presentations of your Technical Report Course wrap-up and evaluation Environmental Science Research Methods 4 Evaluation: Technical Report: 132 points. Due the last week of class. The students technical report will have 9 areas that will be graded – Title page (2 pts), Abstract (10 pts), Introduction (15 pts), Methods (15 pts), Results (15 pts), Discussion (20 pts), References (5 pts), Tables and Figures (20 pts), general formatting/grammar (30 pts). The details of each of these sections will be covered during the course lectures. Each week a specific section of the technical report will be discussed and due. Students are encouraged to complete each week’s assigned section early and turn it in for comments. Assignments turned in by the due date will be returned to students for revisions to improve their final mark. Since each section builds on the last, it is important to meet these deadlines. We will work collaboratively on ELive on each assigned section, so having them completed on time is important. The instructor will also work individually with each student through every step of this process to ensure understanding and completion of each of the report sections. Presentation: 50 points. Students will make a 10-minute oral presentation reporting their findings from the technical report to the class during the last week of class with a minimum of three visual aids. Time will be allowed (5 min) at the end for student questions and discussion. Presentations will be oral but should include at least 3 visuals (slides). Each presentation will be graded on the content (5 pts.), clarity (5 pts.), delivery or logical progression of ideas (5 pts.), integration of material from class (5 pts.), use of visual aids (3 pts) and the ability to answer questions (2 pts.). Class participation: 1 point can be earned each lecture (for 18 pts.) Participation in discussions and asking questions is important for comprehension and understanding of the course content. Total points = 200 Report: 132 Presentation: 50 Class Participation: 1 x 18 = 18 Your grade can be calculated based on the total number of points you receive on the various assignments by adding up the total number of points you have received and divide by the total number of points that have been available. The standard grading scale will be used to assign a final grade: 90-100% = A 80-89% = B 70-79% = C 60-69% = D Below 60% = F Grade A Points 200175 B 174150 Definition An honor grade. Demonstrates originality, independence, a thorough mastery of the work; completing more work than is regularly required and conducted assignments on own without being asked. Demonstrates a deep understanding of scientific principles, presented with exceptional clarity & poise. Better than the average. Above the average expectation. Assignments are accomplished on time and presentation is orderly and thoughtfully put Environmental Science Research Methods 5 C 149125 D 124100 F 99 below together but does not have the depth and originality for an “A”. Average. The student grasps the essential information; work is complete and presented on time but not alluring. Data presentation is acceptable but no accompaniments. Below average. Student misses significant aspects of the techniques and does not maintain field notes. Material is not turned in on time; student is unprepared to conduct research. Field notebook not satisfactorily maintained. Student was unable to complete the research on time with at least a 60% understanding and presentation. Support and Disability Services: Tutoring is available to eligible students through UAF Student Support Services or Bristol Bay Campus. Contact UAF via the Internet at http://www.uaf.edu/sssp/ or BBC by calling the toll free number at 1.800.478.5109. Library services are available at http://www.uaf.edu/library/ or call the toll free library information number at 1.800.478.5348 and ask for the off-campus librarian. UAF has a Disability Services office that operates in conjunction with the College of Rural and Community Development (CRCD) campuses and UAF’s Center for Distance Education (CDE). Disability Services, a part of UAF’s Center for Health and Counseling, provides academic accommodations to enrolled students who are identified as being eligible for these services. If you believe you are eligible, please visit http://www.uaf.edu/chc/disability.html on the web or contact a student affairs staff person at the Bristol Bay Campus. You can also contact Disability Services on the Fairbanks Campus at (907) 474-7043, fydso@uaf.edu “The Office of Disability Services implements the Americans with Disabilities Act (ADA), and insures that UAF students have equal access to the campus and course materials. I will work with the Office of Disabilities Services (203 WHIT, 474.7043) to provide reasonable accommodation to students with disabilities.” Guidelines and Grading Rubric for the Final Scientific Report Each student is required to write a double-spaced 6-8 page paper (additional pages will contain the title page, literature cited, figures and tables) reporting on the individual research project using their own data or data given to them. A scientific manuscript is organized to reflect the basic pattern of the scientific process. It follows a highly structured format unlike a paper that is written for an English course. Instead, the aim is a report that clearly and logically presents the research question, methods, results, and conclusion. The content required of the paper is very similar to that of an article in a journal such as Ecology and follows the format required for submitting a manuscript for publication. The grading rubric below indicates the details of how this paper will be graded. Plagiarism and any other infraction of academic integrity is easy to do in this course, but will not be tolerated! Review the UAF Student Code of Conduct in the UAF Catalog for more information (http://www.uaf.edu/catalog/current/academics/regs3.html). Environmental Science Research Methods 6 The final scientific paper has the following major sections (132 total points – 66% of your final grade): Points Section Title page. The first page should include the title, author’s names, and their universities. The title 2 10 15 15 15 should accurately reflect the content of the paper. A good title includes the study organism(s), the particular system examined (e.g. prairie), and the key variables. Here are some examples: What is the Environmental Value of the Nushagak Watershed Measuring Tidal Velocities in Bristol Bay Abstract. (1 paragraph) All four main sections of the paper should be represented, containing only the essential information from the paper. Be concise, especially in describing the methods; you have only 250 words. Remember how important a strong abstract is. It occurs in databases such as Biological Abstracts and is used by the reader to decide whether the material in the paper will be worth reading.\ Introduction. (about 4 paragraphs) Overall, you must show why the topic (hypothesis) is of significance (Why should the reader care?), place it in the context of what has already been published about the topic (all references must be cited parenthetically in proper format), and make it clear how the hypothesis logically follows from what is already known. 1. Introduce the general topic and indicate why it is important. 2. Use a couple of paragraphs to introduce what is known about the important variables you will be considering, i.e. the independent variable and how the dependent variable(s) responds to it. 3. In the last paragraph highlight the question/objective of your study, then state your formal hypothesis (or hypotheses) and predictions. Add any assumptions you have made. Methods. (4-5 paragraphs) Explain how you performed your research in sufficient detail to allow others to repeat your research to see if they get the same results. Include information about: 1. Study site + study organism(s) 2. All aspects of the experimental design. a. independent variable (+ number of treatments; number of replicates per treatment) b. dependent variables (operationally, what your unit of measurement was, what you measured on each unit, and your sample size), 3. The final paragraph should state the statistical tests performed and why selected. 4. Throughout, use past tense and mainly passive voice (not “We measured height”; rather “height was measured”). Results. (1 paragraph) Very short, usually one sentence for each prediction. In order of your predictions, summarize verbally your relevant results. The section must be in written paragraph form. Several tables or lists of your results will not suffice; you need to describe your data. Summarize the most important feature from each figure (table) you want the reader to notice, back up each result with statistical results, and refer to each figure/table. For each prediction: 1) Point out key pieces of information from a figure or table. 2) Summarize the results of the statistical tests in descriptive form, with hard numbers in parenthesis following. (e.g. Mean number of kills for the two species did not differ significantly (ttest, P = 0.24) (Table 1). (Refer to the figure/table with data that support this statement). 3) In your text, refer to tables and figures as you would statistics - in parenthesis after a general statement (e.g. Nitrogen had a strong positive effect on invertebrate diversity (Fig.1).). In the text, refer to tables as Table 1, but Figures as Fig. 1). 4) Do NOT interpret your data. Likewise, do not make conclusions about your original hypothesis. Evaluation of support for hypotheses and interpretation of the outcomes occur in the discussion. 5) Put all tables and figures at end of the paper; none go in the Results section. 6) Do not list data in the text that are presented in a figure or table (for example, if a table gives the mean and standard deviation for a particular experiment, simple refer to the table in your text rather than writing out each number in the text). Data occur only one place; either in the text or in the tables/figures. 7) Each Tables and Figures must be addressed directly in the paper; almost all will be in the Environmental Science Research Methods 7 Results. 20 5 20 30 Discussion. (6-7 paragraphs) Overall, you evaluate your results in terms of the original hypothesis, explain possible reasons why or why not the hypothesis was supported, compare your results to other studies, and point out the significance of your results. Here are the components listed in order. 1. Interpret your results in the context of your hypotheses. Clearly state whether or not your hypothesis was supported. (e.g. The number of kills on the two prey species did not differ significantly; hence, our hypothesis was not supported. Fish did not prefer one prey species over the other.) 2. Explain possible reasons for why or why not (using your data to support these statements). Also discuss any limitations of your study and alternative explanations of the results (e.g. The different phytoplankton densities may be due to different light intensities, rather than the presence/absence of fish). 3. Integrate your study with other literature in the area without reviewing the entire field; this often refers back to the introduction section. Pertinent, related literature should be cited (with references in parentheses) for purposes of comparison with your results. 4. Suggestions for further research: parts of the current study that could be improved or expanded, other new areas that could be explored as alternative explanations for patterns observed in the data, or new directions for research opened up from the observations in the results and discussion sections. 5. Finish this section with a major conclusion pointing to its significance (“take-home” message). Literature Cited. Only references actually cited in your paper should appear at the end in alphabetical order by first author and in standard reference format (see below for details). Provide at least 5 references from primary literature or specialized reviews (not textbooks). Follow the format exactly. General Format for a Citation For a journal article: Author(s.). Year. Title. Journal Volume:Page-page. For a book: Author(s). Year. Title. Edition. Publishing Company. Location of Publishing Co. Tables and Figures. 1. All tables and figures should be clearly numbered and labeled. Tables are numbered separately from figures. 2. Include a caption (legend) at the top of the Table but at the bottom of the Figure that accurately describes contents and pertinent information. They contain a description of the variables. Related statistical information may also be included, such as sample sizes, mean +/-, SD or SE (note: if error bars are used then you must mention whether they are SE or SD). 3. Figures must identify all variables and have clearly labeled axes, including units of measurement. 4. Figures, tables, and legends should provide the reader with enough information to understand the figure without reading the results section. General. Follow the directions above and below for the overall format! See below for reminders and items commonly forgotten. It is assumed that the paper will be well written with proper spelling, grammar, and punctuation. State the main idea of each paragraph in a clearly constructed topic sentence (this will do wonders for your writing and help the reader immensely). The following guidelines for a proper format are to be followed precisely in writing your paper. 1. Sections of a manuscript should be in order of Title Page, Abstract, Introduction, Methods, Results, Discussion, Literature Cited, Tables, and Figures. 2. The manuscript should be typed and double spaced in font 12, from Abstract to the end of the Literature Cited. 3. Each page should be numbered, including figures and tables. 4. Scientific names: The first time an organism is mentioned use its common name and full scientific name (always underline or italicize). After this first mention, the organism may be referred by its common name or shortened scientific version (R. tarandus). Just pick a format and stick with it. Common problems found among scientific papers: Environmental Science Research Methods 8 1. 2. 3. 4. Missing an outline of methods in the abstract. Failing to state the main hypothesis/prediction clearly in the introduction. Missing captions (legends) or appropriate labeling for figures and tables. Presenting the results in figures and tables without summarizing the major trends of interest in the main text. You should not discuss or evaluate in the results, but you should tell what was found, including a statistical summary. 5. Missing critical biological observations that affect the interpretation of the results. 6. Lack of logical flow of argument in introduction or discussion. 7. Dwelling on weak possibilities in discussion. Grading Rubric for the Oral Presentation (50 points – 25% of the final grade): For a poster presentation, omit the style/delivery column. Adapted from Brewer, C.A., and D. Ebert-May. 1998. Hearing the case for genetic engineering: breaking down the barriers of anonymity through student hearings in the large lecture hall. Journal of College Science Teaching 28 (2): 97-101. Grading Level Excellent5 0 pts Clarity (5pts) Well thought out • Use of proper language • Significance clearly stated • Previous work sets the stage for this study • Handout provided for the audience Good 40 pts Well thought Adequate 30 pts Talk a bit out • Use of proper language • Significance clearly stated • Handout provided for audience disorganized • Shows some effort to use proper language • Significance a bit unclear • Handout not well formatted Content (5pts) Identifies the research question or work • Has advanced understanding of the experimental approach and significance • Critically evaluates results, methodology and/or conclusions • Scientifically rigorous and well researched Identifies the research question or work • Has basic understanding of the experimental approach • Critically evaluates results, methodology and/or conclusions • Well researched Research question a bit unclear • Description of experimental approach a bit confusing • Results and conclusions stated but not critically Environmental Science Research Methods Style/Delivery (5pts) Uses time wisely • Logical progression • Speaks with good pacing • Makes eye contact and does not read; information • Use engaging tone and vocabulary Spends too much time on introduction • Speaks well, but often back tracks • Makes good eye contact and looks at notes occasionally • Uses good vocabulary Presentation poorly timed • Presentation jumping from different topics • Some hesitation and uncertainty are apparent • Makes little eye Use of Visual Aids (5pts) Well placed images • Charts summarize data and/or conclusions • Size and labels are clear • Very little text • Figures and images explained and described well • AV set up properly Excellent images but not always well placed • Size and labels are clear • Very little text • Figures and charts are explained well • A/V mishaps resolved Labels and legends are a bit unclear • Size might be a bit too small • Too much detail • Blocks of text on handouts or Integration of Knowledge (5pts) Integrates research findings to broader context • Understands implication of data or method • Identifies future avenues of investigation • Supports arguments or explanation with references Ability to Answer Questions (5pts) Anticipates audience questions • Understands audience questions • Can integrate knowledge to answer questions • Thoroughly responds to questions Minimally Does not integrates research findings to broader context • Has some understanding of the implications of data or method • Identifies some future avenues of investigation • Supports arguments or explanation with references Does not integrate the work or method into the broader context • Supports argument or explanation with few references • Makes some errors in interpretation and application of data or anticipate audience questions • Understands the audience questions • Can integrate knowledge to answer the question • Thoroughly responds to most questions Does not anticipate audience questions • Makes an effort to address question • Can address some questions • Overlooks 9 Poor 20 pts evaluated • No use of outside readings contact • Monotone and non-engaging delivery Talk difficult Does not Presentation to follow • Unclear language • Does not understand significance of paper • No handout understand research or work • Does not understand experimental approach • Does not understand conclusions or recognize implications for future work poorly timed • Jumbled with no logical progression • Makes no eye contact and reads from notes • Hesitation and uncertainty are apparent slides • Figures are explainedwell • AV mishaps resolved Labeling is not clear or too small to see • No logical placement of material • Mostly text and very few images • Figures are not explained • AV mishaps unresolved method • Makes few connections between data, method, and conclusions Does not integrate the Work/method into the broader context • Makes little effort to usedata to support arguments • Misinterprets information • Makes no connections between data, method, and conclusions • Lacks logic obvious questions • Often responds poorly to questions Either makes no effort to respond to questions or does so poorly No effort 0 pts Web Based Reading List Scientific writing reference manuals How to Write A Paper in Scientific Journal Style and Format http://abacus.bates.edu/~ganderso/biology/resources/writing/HTWtoc.html The Scientific Paper (JMU) http://classweb.gmu.edu/biologyresources/writingguide/ScientificPaper.htm Writing a scientific paper http://biology.luther.edu/paper.htm Basic Statistics on the internet http://scene.asu.edu/habitat/stats.html http://www.statsoft.com/textbook/stbasic.html Stats and Excel http://phoenix.phys.clemson.edu/tutorials/excel/stats.html Excel guides Biology statistics made simple using Excel http://www.ase.org.uk/htm/journals/ssr/pdf/ssr_2001_dec_23-34.pdf Using Excel for Generating Graphs http://www.biology.iastate.edu/Courses/202L/New%20Site%20S05/212%20assignments /Generating%20GraphsS06.htm PowerPoint guides Poster Presentations http://www.biology.eku.edu/RITCHISO/posterpres.html Using PowerPoint to Create Poster Presentations http://limacenter.osu.edu/Poster/Index.html Advice for preparing and delivering research slide shows http://www.swarthmore.edu/NatSci/cpurrin1/powerpointadvice.htm Environmental Science Research Methods 10