Can f1 ELISA detailed methods The ELISA kit for Can f1 was purchased from Indoor Biotechnologies , Charlottesville, VA. The protocol for the assay was provided by the company. Briefly, 100 ul monoclonal antibody (against Can f1) in bicarbonate buffer, pH 9.6, was added to a microtiter plate (96 wells). The plate was incubated at 4 deg C overnight. The plate was washed 3X in PBS-tween (PBS-T) on the next day. 100 ul PBS-T containing 1% BSA (bovine serum albumen) was added to each well and was incubated at room temperature for 30 minutes. The plate was washed 3X in PBS-T. 100 ul of Can f1 reference standard ( 1000 ng/ml to 2 ng/ml) in BSA PBS-T; 100 ul of dust samples (both in duplicates) were added to each well and the plate was incubated at room temperature for 1 hour. After 5X washing with PBS-T, 100 ul rabbit anti-Can f1 was added to each well and the plate was left at room temperature for 1 hour. The plate was washed again 5 times with PBS-T. 100 ul peroxidased goat anti-rabbit IgG was added to each well and the plate was incubated at room temperature for 1 hour. After washing for 5 times with PBST, 100ul ABTS/hydrogen peroxide was added to each well. OD was read at 405nm after the top of curve reached 2.0. A standard curve was plotted with the absorbance vs concentration of the standard. The value of the sample was obtained from the standard curve. ONLINE REPOSITORY Supplemental TABLES Supplemental Table 1. Number of children for which there was data on given exposure variable and outcome Variable CCot UCot Gas stove NO2 Dog allergen Dog ownership total 279 370 380 155 379 377 In those In those with data with data on atopy at on atopy at 12 months 7 years 276 268 366 360 376 367 151 150 375 366 373 364 In those with data on asthma at 7 years 279 370 380 155 379 377 In those with data on BHR at 7 years 258 338 348 145 347 345 Supplemental Table 2. Sample size and mean ± standard deviation or frequency (percent) of early exposures. Environmental tobacco smoke: CCot (ng/ml) UCot (ng/mg) NO2: (parts per billion) Dog allergen: (µg/g of dust) Presence of gas stove Dog ownership Atopy TOTAL Control Intervention 279 9.2 ± 38.2 130 9.9 ± 39.4 149 8.5 ± 37.2 370 89.5 ± 280.0 155 11.3 ± 5.1 379 9.0 ± 21.0 380 37 (9.7) 377 60 (15.9) 376 90 (23.9) 173 75.5 ± 231.1 72 12.1 ± 6.0 177 8.4 ± 21.2 178 21 (11.8) 177 26 (14.7) 175 42 (24.0) 197 101.9 ± 316.9 83 10.6 ± 4.0 202 9.6 ± 20.9 202 16 (7.9) 200 34 (17.0) 201 48 (23.9) Supplemental Table 3. Frequency (%) of asthma and BHR by dog allergen and other (non-allergen) exposure status; associated ORs Exposures^ --dog allergen AND NO2 --only dog allergen --only NO2 --neither --dog allergen AND gas stove --only dog allergen --only gas stove -- neither --dog allergen AND UCot --only dog allergen --only UCot -- neither --dog allergen AND CCot --only dog allergen --only CCot -- neither Asthma No asthma Adjusted* OR** BHR No BHR Adjusted* OR** 5 (25.0) 3 (15.0) 7 (35.0) 5 (25.0) 14 (10.4) 18 (13.3) 51 (37.8) 52 (38.5) 4.8 (1.1-21.5) 1.0 (0.2-5.2) 1.3 (0.4-4.5) 1 5 (8.5) 9 (15.3) 22 (37.3) 23 (39.0) 13 (15.1) 11 (12.8) 31 (36.0) 31 (36.0) 0.6 (0.2-1.8) 1.1 (0.4-3.1) 0.9 (0.4-2.0) 1 4 (5.6) 26 (36.6) 4 (5.6) 37 (52.1) 22 (31.0) 8 (11.3) 21 (29.6) 20 (28.2) 13 (26.0) 7 (14.0) 18 (36.0) 12 (24.0) 8 (2.6) 94 (30.5) 21 (6.8) 185 (60.1) 62 (20.8) 34 (11.4) 86 (28.9) 116 (38.9) 37 (16.2) 39 (17.1) 68 (29.8) 84 (36.8) 3.0 (0.7-12.5) 1.2 (0.6-2.3) 1.0 (0.3-3.4) 1 1.8 (0.8-4.0) 1.1 (0.4-3.0) 1.1 (0.5-2.5) 1 2.7 (1.1-7.1) 1.3 (0.4-4.1) 1.4 (0.6-3.5) 1 4 (2.8) 37 (26.2) 11 (7.8) 89 (63.1) 24 (17.6) 15 (11.0) 47 (34.6) 50 (36.8) 15 (14.3) 14 (13.3) 36 (34.3) 40 (38.1) 6 (2.9) 71 (34.5) 13 (6.3) 116 (56.3) 49 (24.4) 24 (11.9) 52 (25.9) 76 (37.8) 29 (19.1) 29 (19.1) 44 (28.9) 50 (32.9) 1.0 (0.2-3.8) 0.7 (0.4-1.1) 1.1 (0.5-2.6) 1 0.8 (0.4-1.5) 0.8 (0.4-1.8) 1.3 (0.8-2.3) 1 0.7 (0.3-1.4) 0.6 (0.3-1.3) 1.0 (0.5-1.8) 1 ^ Exposures defined as per methods *Models are adjusted for group allocation (“intervention”), which was forced in, and for any baseline characteristic (race, gender, family history of asthma, maternal education, residence city, season, child’s atopic status) with p<0.05 upon being entered in a stepwise manner. The specific variables retained in model after stepwise process are noted as follows for each of the four models, by co-exposures respectively: for NO2 = intervention, gender, atopic status; for gas stove = intervention, gender, history of asthma, residence city, atopic status; for UCot = intervention, gender, history of asthma, residence city, atopic status; for CCot = intervention, gender, history of asthma, atopic status. ** odds of outcome given elevated dog allergen, other exposure or both relative to having neither (95% CI); bold indicates p<0.05 Supplemental Table 4. Frequency (%) of asthma and BHR by atopy and non-allergen exposure status; associated ORs Atopy status/exposures^ --atopy AND NO2 --only atopy --only NO2 --neither --atopy AND gas stove --only atopy --only gas stove -- neither --atopy AND UCot --only atopy --only UCot -- neither --atopy AND CCot --only atopy --only CCot -- neither Asthma No asthma Adjusted* OR** BHR No BHR Adjusted* OR** 5 (25.0) 5 (25.0) 7 (35.0) 3 (15.0) 4 (5.6) 30 (42.3) 4 (5.6) 33 (46.5) 20 (28.2) 14 (19.7) 23 (32.4) 14 (19.7) 15 (30.0) 10 (20.0) 16 (32.0) 9 (18.0) 16 (12.2) 17 (13.0) 48 (36.6) 50 (38.2) 6 (2.0) 50 (16.4) 22 (7.2) 227 (74.4) 21 (7.1) 33 (11.2) 126 (42.7) 115 (39.0) 20 (8.8) 18 (8.0) 86 (38.1) 102 (45.1) 5.9 (1.2-28.1) 4.4 (0.9-20.8) 2.3 (0.6-9.5) 1 8.6 (2.0-37.1) 5.5 (2.9-10.3) 1.3 (0.4-4.4) 1 8.0 (3.3-19.5) 4.2 (1.71-10.0) 1.0 (0.5-2.2) 1 9.3 (3.4-25.5) 9.4 (3.1-28.3) 2.2 (0.9-5.3) 1 9 (15.5) 11 (19.0) 18 (31.0) 20 (34.5) 6 (4.3) 41 (29.3) 9 (6.4) 84 (60.0) 25 (18.5) 22 (16.3) 45 (33.3) 43 (31.9) 16 (15.4) 17 (16.3) 35 (33.7) 36 (34.6) 12 (14.5) 9 (10.8) 31 (37.3) 31 (37.3) 3 (1.5) 32 (15.7) 15 (7.4) 154 (75.5) 11 (5.5) 22 (11.1) 90 (45.2) 76 (38.2) 15 (9.9) 10 (6.6) 59 (39.1) 67 (44.4) 1.2 (0.4-3.3) 1.9 (0.7-5.4) 0.9 (0.4-2.0) 1 3.7 (0.9-15.1) 2.4 (1.4-4.0) 1.1 (0.5-2.6) 1 4.1 (1.8-9.2) 1.8 (0.9-3.6) 0.9 (0.5-1.5) 1 2.0 (0.9-4.5) 3.2 (1.3-7.6) 1.1 (0.6-2.0) 1 ^ Exposures defined as per methods *Models are adjusted for group allocation (“intervention”), which was forced in, and for any baseline characteristic (race, gender, family history of asthma, maternal education, residence city, season) with p<0.05 upon being entered in a stepwise manner. The specific variables retained in model after stepwise process are noted as follows for each of the four models, by co-exposures respectively: for NO2 = intervention; for gas stove = intervention, gender, history of asthma, residence city; for UCot = intervention, gender, history of asthma, residence city; for CCot = intervention, gender, history of asthma. ** odds of outcome given atopy, non-allergen exposure or both relative to having neither (95% CI); bold indicates p<0.05 Supplemental Table 5. OR (95% CI) for “intercondition” comparisons in main text figures 1 and 2. Note that the ORs presented here differ from those in figures 1 and 2, as they represent distinct comparisons, as described within this table Asthma BHR Supplemental Table 5a (reflects Figure 1 “intercondition” comparisons) Combined exposure, relative to elevated dog allergen only: Dog allergen and NO2: Dog allergen Dog allergen and gas stove: Dog allergen Dog allergen and UCot: Dog allergen Dog allergen and CCot: Dog allergen 2.1 (0.4-10.3) 1.9 (0.5-7.0) 1.5 (0.6-3.7) 2.0 (0.7-5.6) 0.3 (0.1-1.7) 1.7 (0.4-7.5) 0.8 (0.3-1.9) 0.8 (0.3-2.0) Single exposure, relative to elevated dog allergen only: NO2: Dog allergen Gas stove: Dog allergen UCot: Dog allergen CCot: Dog allergen 2.9 (0.8-10.9) 2.9 (0.6-14.9) 1.2 (0.6-2.5) 1.4 (0.6-3.3) 0.6 (0.2-1.8) 0.9 (0.2-4.2) 0.5 (0.3-1.0) 0.6 (0.3-1.4) Elevated dog exposure alone, relative to single elevated exposure only: Dog allergen: NO2 Dog allergen: gas stove Dog allergen: UCot Dog allergen: CCot 0.8 (0.2-3.6) 0.7 (0.2-2.2) 0.8 (0.3-2.4) 1.2 (0.4-3.2) 0.9 (0.3-2.4) 2.3 (0.8-6.1) 1.4 (0.7-3.1) 1.6 (0.7-3.5) Supplemental Table 5b (reflects Figure 2 “intercondition” comparisons) Atopy and exposure, relative to atopy only: Atopy and NO2: Atopy Atopy and gas stove: Atopy Atopy and UCot: Atopy Atopy and CCot: Atopy 1.0 (0.2-4.4) 2.4 (0.5-11.4) 1.8 (0.7-4.6) 0.5 (0.1-2.0) 0.2 (0.0-1.1) 1.7 (0.4-7.8) 3.1 (1.1-8.6)* 0.7 (0.2-2.2) Atopy and exposure, relative to exposure only: Atopy and NO2:NO2 Atopy and gas stove:gas stove Atopy and UCot:UCot Atopy and CCot: CCot 2.7 (0.7-10.4) 3.6 (0.7-19.0) 6.6 (2.9-15.1)* 5.0 (2.0-12.8)* 1.4 (0.4-4.1) 3.5 (0.7-17.9) 4.6 (2.1-10.1)* 1.9 (0.8-4.3) 1.9 (0.5-6.8) 3.7 (1.1-12.5)* 4.3 (1.7-10.6)* 3.4 (1.3-9.1)* 2.0 (0.7-5.8) 2.1 (0.8-5.4) 2.0 (1.0-4.0)* 2.9 (1.2-7.0)* Atopy only, relative to exposure only: Atopy:NO2 Atopy:gas stove Atopy:UCot Atopy:CCot Models are adjusted for group allocation (“intervention”), which was forced in, and for any baseline characteristic (race, gender, family history of asthma, maternal education, residence city, season, child’s atopic status) with p<0.05 upon being entered in a stepwise manner. * indicates p<0.05