Introduction
Welcome!!
NCRR
Workshop Goals
Introduction
Make you useful to
SCIRun/BioPSE and map3d
Make SCIRun/BioPSE and
map3d useful to you!
Send you home with a useful
tool
NCRR
The Cast (in order of appearance)
Introduction
Direction
• Chris Johnson
• Rob MacLeod
• Dave Weinstein
Support Staff
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Allyne Betancourt
Heidi Gellerson
Richard Coffey
Nathan Galli
Erik Jorgenson
Instructors
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Darby Uitert
Gordon Kindlmann
Dav de St. Germain
Marty Cole
Steve Parker
Developers
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Michael Callahan
McKay Davis
Bryan Worthen
Ted Dustman
Systems Support
• Robert Cummins
• Simon Gao
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Day #1 The Basics
Schedule
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Introduction
10:00 Welcome/Overview and Logistics (SCR)
10:10 Introduction to the Center
10:20 Background for SCIRun/BioPSE(SCR)
10:35 Example Problem (SCR)
11:00 Coffee Break
11:15 map3d Intro (SCR)
11:45 Elements of BioPSE/SCIRun
12:15 Teem, DTI, and BioTensor
1:00 ITK
1:15 Lunch (SCR)
2:00 Lab Session (VSC)
3:30 Research Presentations
5:00 Free Evening (optional group dinner)
NCRR
Day #2 Advanced SCIRun
Schedule
8:30 Pickup at University Guest House
9:00 Installation and Configuration (Dav)
9:30 Source code organization (Dave)
10:00 SCIRun dataflow datatypes, I/O (Dave)
10:20 Dynamic Compilation (Marty)
10:45 Coffee Break
11:00 Network Editing, Subnets (Dave)
11:20 Debugging in SCIRun (Dav)
11:40 Future of SCIRun (Steve and Dave)
11:10 map3d Options and Usage, Scripting (Rob)
12:20 Lunch
1:20 Lab Time
5:00 Return to Guest House
6:00 Leave Guest House for Dinner (Millcreek Inn)
Lab Time
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Introduction
NCRR
Day #3 Making Modules
Schedule
8:30 Pickup at University Guest House
9:00 Module Design and Creation (Marty)
10:00 Programming Conventions (Dav)
10:15 GUI Design Guidelines (Dav)
10:30 Coffee Break
10:45 Data Import/Export (Dave)
11:15 Contributing Code (Dave)
11:30 Lab Time
12:30 Lunch
1:30 Lab Session (cont’d) (VSC)
4:00 Discussion and Evaluation (Rob/Dave)
5:00 Return to Guest House
Lab Time
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Introduction
NCRR
Guest Machines
Linux:
norbert.sci.utah.edu (RH9)
grumpy.sci.utah.edu (RH8 derivative)
shot.sci.utah.edu (Mandrake 9.x)
dopey.sci.utah.edu (Mandrake 9.x)
dione.sci.utah.edu (RH8 derivative)
MacOSX:
samurai-jack.sci.utah.edu (10.3.x)
mojojojo.sci.utah.edu (10.2.x)
Irix:
rapture.sci.utah.edu (5 heads)
ray.sci.utah.edu (1 head at the demo desk)
Introduction
NCRR
Guest Accounts
Account names:
Introduction
• ncrr0..ncrr3: Linux
• ncrr4…ncrr9: SGIs
• ncrr8, ncrr9: Mac/OSX
Password:
• ncrrC0NF
zero
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Logistics (Allyne)
Introduction
Transportation
Maps; SCI Institute Area
Welcome Packet
Meals; Beverages (e.g., with dinner)
Questions?
NCRR
Website
Introduction
www.sci.utah.edu/ncrr/workshops/workshop03/
Schedule
Slides from talks
Links to resources
Anything else we think of
NCRR