College of San Mateo Course Outline New Course Update/No change Course Revision (Minor) Course Revision (Major) Date: February, 2009 Department: Chemistry Number: 232 Course Title: Organic Chemistry II Units: Total Semester Hours: Lecture: 48 5 Lab: 80 plus 16 recitation Homework: 80 By Arrangement: 16 Length of Course Grading Semester-long Short course (Number of weeks Letter ) Open entry/Open exit 1. Pass/No Pass Grade Option (letter or Pass/No Pass) Prerequisite (Attach Enrollment Limitation Validation Form.) Chemistry 231 with a grade of C or better 2. Corequisite (Attach Enrollment Limitation Validation Form.) 3. Recommended Preparation (Attach Enrollment Validation Form.) 4. Catalog Description (Include prerequisites/corequisites/recommended preparation.) 232 Organic Chemistry II (5) Minimum of 48 hours of lecture, 80 hours of lab, 16 recitation hours plus 16 hours by arrangement per term. Prerequisite: CHEM 231. More rigorous treatment of mechanisms, reactions and synthesis; structure determination using classical and spectroscopic techiniques taught in Chem 231 including identification of unknown compounds and mixtures. Extra supplies may be required. (CSU/UC) 5. Class Schedule Description (Include prerequisites/corequisites/recommended preparation.) More rigorous treatment of mechanisms, reactions and synthesis; structure determination using classical and spectroscopic techiniques taught in Chem 231 including identification of unknown compounds and mixtures. Extra supplies may be required. Prerequisite: CHEM 231. (CSU/UC) 6. Student Learning Outcomes (Identify 1-6 expected learner outcomes using active verbs.) Upon successful completion of the course, the student will be able to: The student should be able to: 3/24/08 Course Outline Page 1 of 12 A. Apply structure-reactivity principles to relate observable physical and chemical properties of organic molecules to their three-dimensional structures and polarities. Extend these principles to applications in related fields such as medicine and bioengineering. B. Predict products of chemical reactions and propose a detailed reaction mechanism to explain the experimental results observed; extend these mechanisms by analogy to similar systems. C. Use information from several sources and combine these data into a consistent model to determine structures of unknown molecules. D. Perform classical and modern analytical and purification techniques on more complex mixtures. Record the experimental observations in a logical order. 7. Course Objectives (Identify specific teaching objectives detailing course content and activities. For some courses, the course objectives will be the same as the student learning outcomes. If this is the case, please simply indicate this in this section). See #6 8. Course Content (Brief but complete topical outline of the course that includes major subject areas [1-2 pages]. Should reflect all course objectives listed above. In addition, you may attach a sample course syllabus with a timeline.) Additional material on the last two topics listed in the Chem 231 Course Outline COURSE LECTURE: Reactions, reagents, and mechanisms:additional classes to be studied are aromatic hydrocarbons, aldehydes and ketones, amines, carbolic acids and their derivatives, polyfunctional compounds, organometallic compounds including modern reducing agents and their properties; concerted reactions; natural and synthetic polymers. Modern analysis of compounds: NMR spectroscopy, IR spectroscopy; simple mass spectral degradation patterns. LABORATORY: Topic: Multistep synthesis using a range of synthesis, isolation, purification and characterisation techniques. Students should be able to synthesis a series of organic compounds (benzaldehyde to benzoin, then benzil, then tetraphenylcyclopentadienone and also benzilic acid) while maintain yield over a multistep sequence. Topic: Advanced Synthetic reactions Coverage: Single or multi-step conversions from the standpoint of type of reaction and of effective performance. Examples to elucidate lecture material. Students should be able to understand the basis of, and carry out successfully, lab-manual type conversions and subsequent work-ups. Examples of experiments include Grignard reagents, Friedel-Craft Acylation and nitration of aromatic compounds, record the results in good order, possibly in format suitable for journal publication. Topic: Spectra Coverage: Further uses of IR and nmr spectra. 3/24/08 Course Outline Page 2 of 12 Students should be able to interpret simple spectra, and deduce structure. Take IR spectra. interpret 1H nmr spectra with minimal instructor assistance. 9. Representative Instructional Methods (Describe instructor-initiated teaching strategies that will assist students in meeting course objectives. Include examples of out-of-class assignments, required reading and writing assignments, and methods for teaching critical thinking skills.) If hours by arrangement are required by this course, indicate the additional instructional activity which will be provided during this time. The course will include the following instructional methods as appropriate, in approximate order - Lecture format used to introduce new concepts and information; time will be provided to encourage student participation in question/answer period. - Theory, purpose, and practice of the lab experiment will be outlined by the instructor during the recitation period. Student will perform experiments on individual basis/ some experiments are class projects that require assigned student groups. - Class participation in the evaluation of data collected. - Where appropriate, selected topics will be complemented by multimedia resources. - Hours by arrangement activities are supervised and may include online search of science databases and references, practice on using molecular models, group discussions on current scientific affairs or relevance to course materials and peer-to-peer learning activities. 10. Representative Methods of Evaluation (Describe measurement of student progress toward course objectives. Courses with required writing component and/or problem-solving emphasis must reflect critical thinking component. If skills class, then applied skills.) - Frequent exams covering two or three chapters of the text. (short questions, multipart questions, problem solving) - Regular end-of-chapter quizzes - Lab write-ups for each experiment, which include purpose, a detailed procedure, analysis of results, and answers to questions designed to elicit critical thinking. Some experiments are selected for more exhaustive treatment in a style appropriate for journal publication. For these write-ups, the student clarifies the purpose of the experiment, develops and rationalizes the experimental protocol, and justifies conclusions drawn from results. 11. Representative Text Materials (With few exceptions, texts need to be current. Include publication dates.) LECTURE TEXT: McMurry, Organic Chemistry, 7th Edition, publisher: Brooks Cole, 2007. ISBN-13: 978-0495118374 Study Guide for McMurray’s Organic Chemistry 7th edition, 2007 ISBN-13: 978-0495112686 LABORATORY TEXT: Pavia, Kriz, Lampman, Engel, Micro and Macro Techniques in the Organic Laboratory, Saunders College Occasional topical articles assigned to maintain currency of lecture material. Prepared by: (Signature) Email address: 3/24/08 Course Outline Page 3 of 12 Submission Date: CHEMISTRY 232 SPRING 2008 TEXT BOOKS AND COURSE MATERIALS • Carey, Organic Chemistry, 6th edition, McGraw Hill • Atkins & Carey, Student Solutions Manual to accompany Organic Chemistry, 6th edition, McGraw Hill • Pavia, Kriz, Lampman, Engel, Micro and Macro Techniques in the Organic Laboratory, Saunders College • • Laboratory safety glasses or goggles that meet the ANSI Z-87.1 standard. If you wear contact lenses you must use the goggles; if you wear prescription glasses, the goggles may fit better over your prescription glasses than the safety glasses do. A laboratory notebook – Spiral bound Notebooks are NOT acceptable. • Molecular Model set (Instructor will give details first week of class). • ATTENDANCE AND CLASS RULES • Lectures begin at 11.10pm on M, W and F. Please be prompt. Repeated lateness will be not tolerated. In return, I will finish lessons on time. • Please switch off cell phones during class. • Snack and beverages allowed during lecture – but please be reasonable. • Instructor will assign random seating during tests. • No talking or distracting other students during lectures. • You are free to leave if you do not want to attend lecture. But if you’re in the lecture room, you may not do other assignments, read magazines, or anything that prevents you from paying attention to the class. GRADING 3/24/08 Course Outline Page 4 of 12 Chem 232 has both a lecture and a lab section. A student earn points in both the lecture and lab sections. Final course grade is based on points in the lecture section only. Points scored in lab are NOT counted in your final score, but a failure in your lab section will adversely affect your overall course grade. In the lecture section, points may be earned in required components or bonus components. Approximately 700pts are allocated to required components and approx 50pts may be earned from bonus categories. The exact number of points varies from semester to semester. The final % score is based on required components only. (ie: if a student earns 580pts from required components, and 30pts from bonus components, her final grade % is 610/700 = 87.1%). Points earned in lab section are NOT counted in final course %, but a student must earn a minimum of 70% in the lab section to pass. The penalty for not meeting this requirement is the the lost of a grade in the final course grade. (ie: if you score enough points for a grade “B” in your lecture section, but gets less than 70% in your lab section, your grade for the course will be “C”) Final grade is assigned based on a class curve and the projected boundaries are: Grade A - Approx. 85-90%, grade B: approx. 75-85%, grade C: approximately 60-65%. Exact grade boundaries will be determined after the final exam. Dishonesty will not be tolerated and will result in points deducted. Make-up tests are not offered. It is your responsibility to attend all required component testing. I will always give at least 3 days notice for quizzes (20pts) and at least 1 week for midterms (150pts). 3/24/08 Course Outline Page 5 of 12 Required Components Quizzes Up to 10 x 20 pts each Quizzes are approx 20 minutes and are short tests given at the completion of each chapter. Each quiz is allocated 20pts. There will be a max of 10 quizzes through the course. You may be allowed extra time at the lab instructor’s discretion. Quizzes are held during lab times. Mid term Tests 2 x 150 pts Two midterm tests will be scheduled (actually dates TBA – approx wks 6 and 12). 150 pts for each test. Text books not allowed in tests, cheat sheet allowed in midterm 2 and final exam but not in midterm 1. Midterms will be held during lab times and allocated time is 2hrs. Midterm tests covers topics from the most recent chapters covered. There are two parts: part A which are short questions requirement simple written answers. All questions in part A must be answered. In part B, students have a choice of various multi-part questions. Typically, you will choose 3 out of 5 questions. There will be no essay questions and no multiple choice questions. Final Examination 200pts The 2 ½ hours final is comprehensive (covers all topics studied during the course). Examination date is May 30th 2008 2.10pm to 4.40pm. Poster In the final 2 to 3 weeks of term, students may select from a number of topics for their own research (literature and web based only. No lab work). They may present their results either in essay or poster form. Guidelines on these topics will be given in due course. WE WILL ONLY DO POSTERS IF THERE IS TIME TOWARDS THE END OF TERM 50pts Bonus Components Lab Tutorial Assignments and end-of-chapter assignments (EOC) Up to 20 x 2pts each There are EOC questions for each chapter we study. These are listed at the end of lecture handouts. These questions are comprehensive and range from basic to quite challenging. You are strongly advised to work through these EOC questions and to check your answers with Carey’s student solution manual. You may earn bonus points by handing your answers to your lecture instructor. Tutorial assignments are given on an as-need basis and will closely follow the chapters. These are questions given in addition to the EOC questions. By turning in answers,a student may earn bonus points. Both EOC and tutorial questions are designed to help you learn the topics covered and prepare you for quizzes and tests. The key difference I will careful go through your tutorial answers but NOT the EOC questions. You are strongly encouraged to ask for help from you lab instructor – in addition to my office hours - on these assignments. Miscellaneous Assignments 2 pts each Occasionally, students are given the opportunity to undertake individual web-based research into topics of scientific interest. These may be group work or individual assignments. These are again voluntary and up to 2 pts per topic may be earned. 3/24/08 Course Outline Page 6 of 12 3/24/08 Course Outline Page 7 of 12 Chem 232 SLO 1. Students will develop an in depth understanding of chemical reactivity based on structure and chemical properties (analysis/knowledge/comprehension) This can include computer modeling program work and various laboratory and exam questions to ensure mastery. 2. Students will learn the IUPAC nomenclature system and apply to range of simple organic compounds (Knowledge/comprehension/application) Various exams, quizzes, lab exercises, notebooks and reports will require application of this skill. 3. Students should understand theories of retrosynthetic analysis in drug chemical synthesis (Comprehension/analysis/application) Exam and quiz questions along with computer structure analysis will be used for this skill. 4. Analyze spectroscopic data to determine molecular structure (Application/analysis) Various spectroscopic techniques will be used in lab involving combinations of instruments , textbook examples and computer simulations will ensure mastery of this material. 5. Comprehend, compare and contrast reaction such as electrophilic aromatic substitution, nucleophilic acyl addition, nucleophilic substitution and various carbon-carbon bond formation reactions. (application/analysis) Exam, quiz and lab report work will be used to evaluate this skill. 6. Develop laboratory skills with special reference to multi-step organic synthesis and structural determination. (Synthesis/analysis) Various laboratory exercises, computer simulations and exam questions will evaluate this skill. 3/24/08 Course Outline Page 8 of 12 Chemistry 232 Lecture Schedule Spring 2008 This is a tentative schedule, subject to changes depending on class progress. I hope to finish the course at least a week before final exam. Please note we will not have time to cover every section from each chapter. Exact details of sections to be covered will be given with lecture handouts. Week # 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 Chapter and Title 9- Alkynes 11 – Arenes and aromaticity 12 – Reactions of Arenes; EAS 14 - Organometallics Catch up week 15 – Alcohols, diols and thiols 16 – Ethers, epoxides and sulfides 17 – Aldehydes and ketones; nucleophilic addition. 18 – Enols and enolates Catch up week 19 – Carboxylic acids 20 – Carboxylic acid derivations; NuAcS Catch up week 21 – Ester Enolates 21 – Ester Enolates Poster week Poster week End of Term Review Other key dates: (guideline only, exacts dates to be announced) Late Feb/Early March: Midterm Test 1 Late March/Early April: Midterm Test 2 May 30th: Final Examination 3/24/08 Course Outline Page 9 of 12 Chemistry 232 Laboratory – Spring 2008 The laboratory section is an integral part of the course. The focus is on laboratory techniques, competence, confidence and organization skills. Passing score is 70% for the lab section. Students who do not score a minimum of 70% will lose one grade from their overall final course grade. (ie: if you score enough points for a grade “B” in your lecture section, but gets less than 70% in your lab section, your grade for the course will be “C”). Students attend two labs per week. Full attendance is required. Most lab classes will begin with technique demos and it is important for students to attend lab sessions promptly. Lab manuals are not available. Lab procedures are posted on instructor website approx. 1 week in advance. Lab Rules • Students must be in lab on time. • Goggles to be worn at all times. • Please wear clothing with good coverage – no tank tops, shorts and open toe sandals. • Long hair must be tied back. • Please use the same fumehood each session. • All experimental work to be carried out in fumehood unless otherwise instructed. • Please use appropriate waste disposal container for all wastes. • All waste must be logged in book provided. • Most glassware should be cleaned with soapy water and rinsed with hot water, allowed to drain on draining racks provided. • Please keep your fumehood and bench space tidy and safe at all times. • Chemical spills must be cleaned up immediately. Instructor will request students to clean up during lab session as required. • Students are encouraged to keep a clear record of laboratory work. See separate sheet on keeping lab book record. • Accidents must be reported immediately or as soon as it’s safe to do so. 3/24/08 Course Outline Page 10 of 12 Lab Section Grading Components Prelab Questions 5 to 10 pts each Each lab procedure includes a prelab worksheet. This contains questions designed to help you prepare for the experiment and to understand the chemistry background. Questions require short written answers. These must be completed before each lab. Post lab Questions 5 to 10 pts each Within a week of completing an experiment, a postlab sheet must be completed. Questions typically ask for a summary of experiment objective, chemical equations, results such as yield and analysis and well as short-answer questions relating to the experiment. Laboratory Exam 50 pts The final experiment is a lab based project. Students are required to design and carry out an esterification synthesis and then determine structure of the ester formed using a combination lab results and spectroscopic data. Assessment is based on how well the experiment was carried out (30pts) and how the results are presented (20pts). More details will follow. General Lab Skills 60 pts This is an evaluation of students’ performance in the lab throughout the semester. Areas include: safety, organization, ability to follow procedure, practical skill, attitude/problem solving and overall ability to relate experimental and practical situations to chemistry principles and theory. Lab Book (optional) (no points) You make have use of lab book for working notes during experiments. However, formal write-ups are not required (but strongly recommended). Guidelines will be given on how to keep a good notebook. 3/24/08 Course Outline Page 11 of 12 Chemistry 232 Lab Experiment Schedule Spring 2008 General Outline Expt 1 is a review of basic techniques from chem. 231: Mpt and Bpt determination, distillation, recrystallization, solvent extraction, FT-IR and GC. Expts 2 to 4 focus on using relatively simple, straightforward synthetic methods to perform a multistep synthesis. A key challenge is to maintain yield and product purity through sequence. Product characterization will be by mpt and IR in most cases. Expts 5 to 7 are independent synthesis that require more advanced synthetic techniques. In all cases, a minimum level of laboratory competence is necessary for success. Expt 8 is an esterification procedure which is also good practice and preparation for the lab exam. Expt 9 is a lab based project/exam. Students are required to design their own lab procedure to carry out an esterification synthesis and then determine structure of the ester formed using a combination lab results and spectroscopic data. Assessment is based on how well the experiment was carried out and how the results are presented. Experiment List This is a tentative list, subject to changes depending on class progress: Check in and lab familiarization. Experiment 1: Re-familiarization with chem231 techniques: mpt, bpt, distillation, recrystallization, solvent extraction, GC and FT-IR Experiment 2: Multistep synthesis - benzoin Experiment 3: Multistep synthesis - benzil Experiment 4: Multistep synthesis – Tetraphenylcyclopentadienone Experiment 5: Grignard Reaction Experiment 6: Nitration of methyl benzene Experiment 7: Friedel Craft acylation Experiment 8: Esterification – banana oil Experiment 9: Unknown Esterification – lab exam. Lab times will also be used for quizzes, midterms and tutorial sessions. 3/24/08 Course Outline Page 12 of 12