Neuron, Vol. 27, 251–263, August, 2000, Copyright 2000 by Cell Press Midline Signals Regulate Retinal Neurogenesis in Zebrafish Ichiro Masai,*‡§ Derek L. Stemple,† Hitoshi Okamoto,* and Stephen W. Wilson‡§ * Laboratory for Developmental Gene Regulation Brain Science Institute RIKEN (The Institute of Physical and Chemical Research) 2-1 Hirosawa, Wako-shi Saitama, 351-0198 Japan †National Institute for Medical Research The Ridgeway Mill Hill London NW7 1AA ‡ Department of Anatomy and Developmental Biology University College London Gower Street London WC1E 6BT United Kingdom Summary In zebrafish, neuronal differentiation progresses across the retina in a pattern that is reminiscent of the neurogenic wave that sweeps across the developing eye in Drosophila. We show that expression of a zebrafish homolog of Drosophila atonal, ath5, sweeps across the eye predicting the wave of neuronal differentiation. By analyzing the regulation of ath5 expression, we have elucidated the mechanisms that regulate initiation and spread of neurogenesis in the retina. ath5 expression is lost in Nodal pathway mutant embryos lacking axial tissues that include the prechordal plate. A likely role for axial tissue is to induce optic stalk cells that subsequently regulate ath5 expression. Our results suggest that a series of inductive events, initiated from the prechordal plate and progressing from the optic stalks, regulates the spread of neuronal differentiation across the zebrafish retina. Introduction During early forebrain development, the eye field initially occupies a single domain in the anterior neural plate (Woo and Fraser, 1995). Subsequent to this, cell movements within the midline of the neural plate, coupled with signals derived from axial midline tissue lead to the formation of two bilateral retinal primordia (Rubenstein and Beachy, 1998; Varga et al., 1999). These primordia evaginate from the brain, form optic cups, and differentiate as neural retina and pigment epithelium. The Hedgehog (Hh) and Nodal families of secreted signaling molecules are involved in splitting of the retinal field. shh mutations cause severe cyclopia in mouse and human (Chiang et al., 1996; Roessler et al., 1996) but not in zebrafish (Schauerte et al., 1998; Karlstrom § To whom correspondence should be addressed (e-mail: imasai@ brain.riken.go.jp [I. M.], s.wilson@ucl.ac.uk [S. W. W.]). et al., 1999). This suggests either that there is redundancy in this pathway in fish or that other factors contribute to the splitting of the retinal primordia. In support of a role for Hh signaling in patterning the optic vesicles in fish, there is the observation that overexpression of Hh proteins suppresses retina and expands optic stalk, a phenotype in some ways opposite to cyclopia (Ekker et al., 1995; Macdonald et al., 1995). The importance of Nodal signaling in early eye patterning is evident from mutations in this pathway in zebrafish. cyclops (cyc), squint (sqt), and one-eyed pinhead (oep) mutant embryos all show varying degrees of cyclopia (Hatta et al., 1991; Heisenberg and NüssleinVolhard, 1997; Schier et al., 1997). cyc and sqt encode Nodal ligands that have both discrete and partially redundant functions (Feldman et al., 1998; Rebagliati et al., 1998; Sampath et al., 1998). Cyc is required for specification of ventral midline CNS tissue, and a failure in migration of this tissue contributes to the failure of bilateral separation of the eyes in cyc⫺/⫺ embryos (Varga et al., 1999). Sqt appears to act earlier in development than Cyc and is required for prechordal plate development (Feldman et al., 1998). Indeed, defects in signaling from the prechordal plate may contribute to the eye defects of sqt⫺/⫺ embryos (Heisenberg and Nüsslein-Volhard, 1997). Embryos lacking both Sqt and Cyc lack mesendoderm, revealing a partially redundant function for each gene in mesoderm induction (Feldman et al., 1998, 2000). The oep gene encodes a EGF-CFC protein (Zhang et al., 1998) required for Nodal signaling activity and embryos missing zygotic Oep function lack prechordal plate and exhibit a cyclopic phenotype similar to cyc (Schier et al., 1997). Removal of both maternal and zygotic Oep function generates the same phenotype as cyc;sqt double mutants, confirming that Nodal signaling requires Oep function (Gritsman et al., 1999). After formation of the optic cup, multipotent retinal precursors give rise to all major cell types in the retina (Harris, 1997). Neuronal differentiation is usually initiated in the central retina and subsequently spreads peripherally (McCabe et al., 1999, and references within). In zebrafish, differentiation is initiated in ventronasal rather than central retina, but, as in other vertebrates, neuronal differentiation spreads as a wave from this position (Raymond et al., 1995; Laessing and Stuermer, 1996; Schmitt and Dowling, 1996; Hu and Easter, 1999). The mechanisms underlying the progression of neurogenesis across the vertebrate retina are unknown but are reminiscent of the neurogenic wave that sweeps across the Drosophila eye imaginal disc generating ommatidia behind the advancing morphogenetic furrow (Heberlein and Moses, 1995). In this process, Hh secreted from mature ommatidial neurons initiates neurogenesis in adjacent undifferentiated cells through induction of the proneural bHLH transcription factor encoding gene atonal. Newly differentiated neurons in turn secrete Hh that initiates further neuronal differentiation and progression of the morphogenetic furrow. In this way, the cycle of Hh secretion and Atonal activation underlies the progression of neurogenesis across the eye disc. In this study, we describe the expression and regulation of ath5, a zebrafish homolog of Drosophila atonal that is exclusively transcribed in the developing retina Neuron 252 Figure 1. ath5 Expression Predicts the Pattern of Neuronal Differentiation in the Embryonic Zebrafish Retina (A–E) ath5. Lateral views of eyes at 25 hr (A), 27 hr (B), 30 hr (C), and 36 hr (D) and ventral view at 3 days (E). ath5 expression is initiated in the ventronasal retina (closed arrowhead) adjacent to the choroid fissure (open arrowhead) and spreads throughout the retina in a wave-like fashion. By 3 days, expression is localized to cells near the ciliary margin. (F–J) islet-1. Expression (arrowhead) is initiated at 27 hr (expression at 25 hr is in the brain) and subsequently spreads through the retina similar to ath5. (K–O) lim3. Expression is initiated in ventronasal retina at 27 hr (arrowhead) and spreads through the retina similar to ath5. (P–Q) neuroD. Expression is initiated in nasal retina (arrowhead) and spreads dorsally in the outer retina. (R) Anti-tubulin antibody–labeled eye. Arrowhead shows early differentiating retinal ganglion cells in the ventronasal retina. (S) FRet43-labeled eye. The earliest differentiating double cones (arrowhead) are located in ventronasal retina adjacent to the choroid fissure. (T–V) Eyes labeled with ath5 RNA probe (blue) and anti-phosphorylated histone H3 antibody (brown). Arrowheads indicate dividing cells throughout the retina at 25 hr and localized to the ciliary marginal zone at 33 hr and 48 hr. The arrow in (V) indicates one dividing cell within the domain of ath5 expression. (T) shows a whole eye, and (U) and (V) show sections through the retina. (W and X) Dorsal views of control and ath5-injected 2 somite stage and 70% epiboly stage embryos labeled to show neuroD (nrd) and huC expression, respectively. There is robust induction of both genes in the ath5-injected embryos. Abbreviations: cmz, ciliary marginal zone; dr, dorsal retina; inl, inner nuclear layer; nr, nasal retina; pl, photoreceptor cell layer; rgl, retinal ganglion cell layer; tr, temporal retina. in a pattern that predicts neuronal differentiation. ath5 expression is absent in oep mutants, suggesting that axial tissues, possibly the prechordal plate, are required to initiate ath5 expression and subsequent neuronal differentiation. However, transplant and explant experiments suggest that ath5 expression is not initiated through direct interaction between prechordal plate and prospective retina. We favor the possibility that prechordal plate influences the formation of optic stalk tissue that subsequently regulates ath5 expression in the retina. In support of this, ath5 is always induced directly adjacent to optic stalk tissue wherever this may be within the optic vesicle; ablation of the interface between retina and optic stalk inhibits ath5 expression; and transplanted optic stalk cells can induce ath5. We also show that in the absence of induction of ath5 in ventronasal retina, expression fails to progress to dorsal and temporal retina, suggesting that a retinal neurogenic wave may be regulated by a series of short-range signaling events that proceed across the retina. These results reveal unexpected similarities between the mechanisms underlying neurogenesis in the eyes of flies and vertebrates. Retinal Neurogenesis in Zebrafish 253 Results Zebrafish ath5 Shows Retina-Specific Expression Closely Correlated with Neuronal Differentiation In the developing fly eye, Atonal is essential for progression of the neurogenic wave and for neuronal differentiation (Jarman et al., 1994). To elucidate how neurogenesis is regulated in the developing vertebrate retina, we isolated a zebrafish homolog of Drosophila atonal by cDNA library screening. The bHLH motif of the zebrafish clone has 87% amino acid identity to Xath5a (Kanekar et al., 1997) and 68% to Drosophila Atonal (data not shown). Phylogenetic tree analysis suggests that the zebrafish gene is an ortholog of Xath5 (data not shown), and so we designated this gene ath5. However, unlike the Xenopus gene, in situ hybridization analysis revealed that ath5 is expressed exclusively in the developing retina. ath5 expression is first detected in the ventronasal retina adjacent to the choroid fissure at 25hpf (Figure 1A), spreads from nasal to more dorsal and temporal retina over the next few hours (Figures 1B and 1C), and is present throughout most of the neural retina at 36 hr (Figure 1D). By 72 hr, when retinal ganglion cell, inner nuclear, and photoreceptor cell layers are distinct, ath5 expression is downregulated in differentiated neurons but remains expressed in retinoblast cells near the ciliary margin (Figure 1E). The initiation and fan-shaped spread of ath5 expression are reminiscent of the pattern of appearance of differentiated neurons at slightly later stages (Raymond et al., 1995; Schmitt and Dowling, 1996; Hu and Easter, 1999). To examine the relationship between ath5 and neuronal differentiation, we compared ath5 expression to that of early neuronal markers. islet-1 (Korzh et al., 1993; Inoue et al., 1994) and lim3 (Glasgow et al., 1997) encode LIM homeodomain proteins that are expressed in retinal ganglion and inner nuclear layer cells (Figures 1J and 1O). Expression of both genes is initiated in ventronasal retina soon after ath5 and subsequently spreads to dorsal and temporal retina, following the progression of ath5 (Figures 1F–1O). We confirmed that neuronal differentiation is indeed initiated in ventronasal retina by examining other neuronal markers. neuroD encodes a bHLH protein expressed during late phases of neurogenesis (Korzh et al., 1998). Within the retina, neuroD expression is initiated in the ventronasal region and subsequently spreads dorsally and temporally within the outer retina (Figures 1P and 1Q). Likewise, the first retinal ganglion cells to be labeled with anti-acetylated ␣-tubulin antibody are present in the ventronasal retina (Figure 1R) as are the earliest FRet43-labeled double cone photoreceptors (Figure 1S; Larison and Bremiller, 1990). We examined the relationship between ath5 expression and proliferation by using an antibody to phosphorylated histone H3 that labels cells in late G2 and M phase (Wei and Allis, 1998). At the stage when ath5 expression is initiated, the nuclei of dividing cells are present throughout the retina near the scleral surface (Figure 1T). As ath5 expression spreads, dividing cells become more localized to the margins of the retina (Figure 1U), and by 48 hr, most dividing cells are located within the ciliary marginal zone peripheral to, or occasionally within, the domain of ath5 expression (Figure 1V). These results indicate that ath5 is neither expressed in the most proliferative cells of the ciliary marginal zone nor within differentiated neurons of the central retina. Instead, in agreement with data in Xenopus on Xath5 (Perron et al., 1998), we suggest that ath5 is expressed Figure 2. ath5 Expression Is Absent in oep⫺/⫺ Embryos but Present in cyc⫺/⫺ Embryos Lateral views of whole embryos. (A and B) ath5 expression in cyc⫺/⫺ embryos. ath5 expression is initiated and spreads throughout the cyc⫺/⫺ retina. The open arrowhead indicates the choroid fissure. (C and D) ath5 expression in oep⫺/⫺ embryos. ath5 expression is absent at both stages of development. (E) Pax6 expression in an oep⫺/⫺ embryo. Pax6 is present in the retina, lens, and diencephalon. (F) rx1 expression in an oep⫺/⫺ embryo. rx1 is expressed throughout the oep⫺/⫺ retina. Abbreviations: d, diencephalon; l, lens; nr, nasal retina; rpe, retinal pigment epithelium; tr, temporal retina. transiently in retinoblasts and perhaps postmitotic neurons prior to full differentiation. To determine if Ath5 can promote neurogenesis, we injected DNA encoding Ath5 under the control of the CMV promoter. Injected embryos exhibited very strong induction of neuroD, a potential target for Ath5 within the retina (Figure 1W). Supporting the possibility that Ath5 may directly regulate neuroD expression, ectopic ath5 often cell autonomously induced neuroD (data not shown). Confirming that Ath5 could promote formation of neurons, injected embryos also showed strong and precocious expression of huC (Kim et al., 1996), an early marker of postmitotic neurons (Figure 1X). ath5 Expression and Retinal Differentiation Are Disrupted in oep⫺/⫺ Embryos but Are Relatively Normal in cyc⫺/⫺ Embryos Mutations that affect the specification or migration of axial midline tissue lead to cyclopic phenotypes in which optic stalk tissue is variably reduced and retinal tissue is fused across the midline (Brand et al., 1996; Varga et al., 1999). To determine if the wave of retinal differentiation is affected in cyclopic mutants, we examined ath5 expression in oep⫺/⫺ and cyc⫺/⫺ embryos. In cyc⫺/⫺ embryos, ath5 expression is initiated in a single spot in nasal retina at the midline of the fused eye (Figure 2A) and subsequently spreads bilaterally from this position throughout the retina (Figure 2B). In contrast to cyc, ath5 expression fails to be induced at around 25hpf in oep⫺/⫺ embryos (Figure 2C) and is still Neuron 254 Figure 3. Retinal Differentiation Is Disrupted in oep⫺/⫺ Embryos but Not cyc⫺/⫺ Embryos (A–C) Plastic sections of 3 day wild-type (A), cyc⫺/⫺ (B), and oep⫺/⫺ (C) retinas. All retinal layers are present in the cyc⫺/⫺ retina, and retinal ganglion cells form a thick axonal layer (arrowheads). In the oep⫺/⫺ retina, layering is severely disrupted although a thin outer nuclear layer (asterisk) and pigment epithelium (inset) do appear to be present. (D–F) islet-1 expression in 2 day wild-type (D), cyc⫺/⫺ (E), and oep⫺/⫺ (F) retinas. islet-1 expression is drastically reduced in the oep⫺/⫺ retina but normal in the cyc⫺/⫺ retina. (G–I) lim3 expression in 2 day wild-type (G), cyc⫺/⫺ (H), and oep⫺/⫺ (I) retinas. lim3 expression is retained in the cyc⫺/⫺ retina but absent in the oep⫺/⫺ retina. (J–L) rx1 expression in 2 day wild-type (J), cyc⫺/⫺ (K), and oep⫺/⫺ (L) retinas. rx1 expression is localized to ciliary marginal zone (arrowheads) and outer layer in wild-type and cyc⫺/⫺ retina but is restricted to the marginal region of the oep⫺/⫺ retina. (M–O) red opsin expression in 3 day wild-type (M), cyc⫺/⫺ (N), and oep⫺/⫺ (O) retinas. red opsin expression is observed in the outer layer in the wild-type and cyc⫺/⫺ retinas but absent in the oep⫺/⫺ retina. (P–R) GABA immunolabelling of cryosections of 3 day wild-type (P), cyc⫺/⫺ (Q), and oep⫺/⫺ (R) retinas. GABA expression is localized to the retinal ganglion cell layer and amacrine cells in wild-type retinas. Weak GABA expression is observed in the cyc ⫺/⫺ retina (arrowheads) but is absent in the oep ⫺/⫺ retina. Except for the inset in (C), all embryos were treated with phenylthiourea (PTU) to reduce pigmentation. Abbreviations: a, amacrine cells; g, retinal ganglion cell layer; ip, inner plexiform layer; in, inner nuclear layer; n, neural retina; o, outer nuclear layer; pe, pigment epithelium. absent at stages when ath5 is normally expressed throughout the retina (Figure 2D). Therefore, although cyc and oep exhibit superficially similar cyclopic defects, ath5 expression is only lost in oep mutants. To determine if retinal identity was disturbed in oep mutants, we examined expression of pax6 and rx1, genes that are initially expressed throughout the retina and later in proliferative cells of the ciliary marginal zone (Macdonald and Wilson, 1997; Mathers et al., 1997; Chuang et al., 1999). Expression of Pax6 and rx1 was present throughout the retinas of oep⫺/⫺ eyes (Figures 2E and 2F), indicating that retinal identity is maintained and suggesting that oep⫺/⫺ retinal cells remain undifferentiated and do not undergo normal neuronal differentiation. To determine if the alterations in early retinal gene expression correlate with later defects in retinal differentiation, we examined lamination and neuronal differentiation in oep⫺/⫺ and cyc⫺/⫺ eyes. In 3 day wild-type and cyc⫺/⫺ retinas, lamination is advanced and nuclear and plexiform layers have formed (Figures 3A and 3B; Fulwiler et al., 1997). In contrast, the laminar structure of the oep⫺/⫺ retina is disrupted (Figure 3C). Although an outer nuclear layer was variably present, cells throughout the rest of the retina were disorganized and very little plexiform tissue was present. Examination of markers of neuronal differentiation demonstrated that retinal neurons are indeed reduced in oep⫺/⫺ retinas. islet-1 and lim3 are expressed in retinal ganglion and inner nuclear cells in both wild-type and cyc⫺/⫺ retinas (Figures 3D, 3E, 3G, and 3H), whereas expression of both genes is severely reduced or absent in oep⫺/⫺ retinas (Figures 3F and 3I). The neurotransmitter GABA is expressed in the same cell layers by 3 days in wild-type embryos (Sandell et al., 1994; Figure 3P). GABA expression is weak but could be detected in cyc⫺/⫺ retinas (Figure 3Q) but not in oep⫺/⫺ eyes (Figure 3R). rx1 is expressed in the proliferating margins and in the outer nuclear layer at 2 days in wild-type (Chuang et al., 1999) and cyc⫺/⫺ retinas (Figures 3J and 3K); whereas, although weak expression is detected in the ciliary margins of oep⫺/⫺ retinas, it is not observed in the outer nuclear layer (Figure 3L). Red opsin is the first opsin detected in differentiating retinal photoreceptors (Raymond et al., 1995), and expression is present in both wild-type and cyc⫺/⫺ eyes (Figures 3M and 3N) Retinal Neurogenesis in Zebrafish 255 Table 1. Wild-Type Cells Can Rescue ath5 Expression in oep⫺/⫺ Embryos Location of Transplanted Cells Embryo ath5 Telencephalon Eye Prechordal Plate Mesenchyme Hatching Gland Heart 1–3 1–6 3–1 3–5 4–1 4–4 1–1 1–2 1–4 1–5 3–2 3–3 3–4 4–2 4–3 4–5 ⫹ ⫹ ⫹ ⫹ ⫹ ⫹ ⫺ ⫺ ⫺ ⫺ ⫺ ⫺ ⫺ ⫺ ⫺ ⫺ ⫹ ⫹ ⫺ ⫹ ⫹ ⫹ ⫹ ⫹ ⫹ ⫺ ⫹ ⫹ ⫹ ⫺ ⫹ ⫹ ⫹ ⫺ ⫺ ⫺ ⫺ ⫺ ⫹ ⫺ ⫺ ⫺ ⫹ ⫺ ⫹ ⫺ ⫺ ⫺ ⫹ ⫹ ⫹ ⫹ ⫹ ⫹ ⫺ ⫺ ⫺ ⫹ ⫺ ⫺ ⫺ ⫹ ⫺ ⫺ ⫹ ⫹ ⫹ ⫺ ⫹ ⫹ ⫺ ⫺ ⫺ ⫺ ⫺ ⫺ ⫺ ⫹ ⫺ ⫺ ⫺ ⫺ ⫺ ⫺ ⫹ ⫺ ⫺ ⫺ ⫺ ⫺ ⫹ ⫺ ⫺ ⫺ ⫺ ⫺ Presence (⫹) or absence (⫺) of ath5 expression in the eyes of oep⫺/⫺ embryos in which wild-type cells were transplanted at late blastula stage. The presence (⫹) or absence (⫺) of transplanted cells in the telencephalon, eye, prechordal plate mesenchyme, hatching gland, and heart is indicated. The cyclopic phenotype was partially rescued in all embryos in which ath5 expression was rescued (1–3, 1–6, 3–1, 3–5, 4–1, and 4–4). Two embryos (1–5 and 4–2) in which a small number of wild-type cells were incorporated into the prechordal plate or hatching gland showed no rescue of cyclopia or ath5 expression. but is absent from oep⫺/⫺ eyes (Figure 3O). These data indicate that, while a ciliary marginal zone is present in the oep⫺/⫺ retina, most retinal cells fail to properly differentiate. To determine if the loss of expression of neuronal markers in oep⫺/⫺ retinas could be due to extensive early cell death, we monitored apoptosis from 24hpf to 2 days. Cell death was observed in the telencephalon and lens of oep⫺/⫺ mutants, but relatively few apoptotic profiles were detected at these stages in the retina of wild-type, cyc⫺/⫺, or oep⫺/⫺ embryos (data not shown). Together, these data indicate that the early absence of ath5 expression is correlated with a later failure of neuronal differentiation and lamination in the oep⫺/⫺ retina. Therefore, although the initial induction of retinal tissue occurs normally in both cyc⫺/⫺ and oep⫺/⫺, later retinal differentiation fails in oep⫺/⫺ embryos. Prechordal Plate Tissue Regulates ath5 Expression Although both cyc and oep mutations disrupt the Nodal signaling pathway (Schier and Shen, 2000), they have strikingly different retinal phenotypes. One difference between cyc⫺/⫺ and oep⫺/⫺ is that prechordal plate tissue is retained in cyc⫺/⫺ embryos (Thisse et al., 1994), whereas it is usually absent by the end of gastrulation in oep⫺/⫺ embryos (Schier et al., 1997). This suggests that spatial or temporal variations in residual Nodal signaling in cyc⫺/⫺ and oep⫺/⫺ embryos may lead to variable retention or loss of anterior axial mesendoderm including prechordal plate. If this tissue subsequently influences the induction of ath5, then its presence/absence could explain the differences in retinal development between cyc⫺/⫺ and oep⫺/⫺ embryos. In support of this possibility, ath5 expression was only lost in Nodal pathway mutant embryos that exhibited severe axial defects. Thus, analysis of another Nodal pathway mutation, squint (Feldman et al., 1998), showed that ath5 was sometimes expressed, sometimes absent, correlating with variable severity of axial deficits (data not shown). Furthermore, retinal differentiation can occur in oep mutants (Malicki et al., 1996), and we have also generated lines of oep fish that exhibit less severe phenotypes and that retain ath5 expression. This suggests that allelic and genetic background differences in oep fish alter the severity of the oep⫺/⫺ phenotype with ath5 expression and retinal patterning only disrupted in embryos exhibiting severe axial midline and cyclopic defects. To test whether axial tissues including the prechordal plate tissue can indeed regulate ath5 expression and retinal differentiation, we performed three sets of experiments. First, wild-type cells were transplanted into oep⫺/⫺ embryos, and ath5 expression was assessed with respect to the location of the transplanted cells. Rescue of ath5 expression occurred in most cases when transplanted cells were found in the hatching gland or mesenchyme around the eyes (likely derivatives of the prechordal plate), but not when cells were incorporated into other tissues (Table 1; Figures 4A and 4B). For the second set of experiments, we used a constitutively activated form of a putative Nodal/Activin serine/ threonine kinase receptor, TARAM-AD, which can rescue mesendodermal tissue in oep⫺/⫺ embryos (Renucci et al., 1996; Peyriéras et al., 1998). oep mutants in which TARAM-AD was expressed showed ath5 transcripts in midline retinal tissue similar to cyc⫺/⫺ embryos (Figure 4C; n ⫽ 14 of 15), suggesting that rescue of mesendodermal tissues rescues ath5 expression. Finally, to determine if removal of the axial mesendoderm can phenocopy the oep retinal defects, we ablated the embryonic shield, the source of axial mesendoderm. Shield-ablated embryos showed varying degrees of axial defects with more severely affected embryos lacking prechordal plate and notochord, and exhibiting an oep-like fused eye (Figure 4D). In the retina of these embryos (n ⫽ 6), ath5 transcripts were absent (Figure 4E), indicating that ath5 expression is dependent upon organizer-derived tissues even in genetically wild-type Neuron 256 Figure 4. Mesendoderm Regulates ath5 Expression (A and B) An oep⫺/⫺ embryo into which dextran-labeled wild-type cells (red in [A]) were transplanted. Transplanted cells have contributed to mesenchyme around the eye (A), and ath5 expression is rescued (B). (C) Lateral view of 27 hr oep⫺/⫺ embryo injected with RNA encoding an activated form of TARAM-AD. This receptor rescues mesendoderm in oep⫺/⫺ embryos, and ath5 is present. (D) Lateral view of a 24 hr embryo in which the embryonic shield was removed. Axial mesendodermal derivatives including notochord (closed arrow) and hatching gland are absent, resulting in an oep-like fused eye (open arrow). (E) Lateral view of 33 hr shield-extirpated embryo labeled with an ath5 RNA probe. No expression is detected in the fused eye. retina. Together, these data suggest that loss of prechordal axial tissues underlies the defects in neurogenesis in the oep⫺/⫺ retinas. The Influence of the Prechordal Plate upon ath5 Expression Is Indirect Signals from prechordal mesendoderm could either directly act upon retinal tissue to induce ath5 expression or could act upon other tissues that subsequently influence neurogenesis. To distinguish between these possibilities, we performed explant experiments to address when signals from mesendoderm might be required. When eyes (n ⫽ 8), or eyes attached to the brain (n ⫽ 20), were dissected free of surrounding tissues at the 18 somite stage (7 hr before initiation of ath5 expression) and cultured in vitro until 33 hr, ath5 was relatively normally induced (Figures 5A and 5B). This suggests that signals from the prechordal mesendoderm are acting earlier than 18 somite stage and are therefore unlikely to directly influence ath5 expression. However, we cannot exclude the possibility that a few non-CNS cells that we failed to remove before culturing might be sufficient to induce ath5. ath5 expression is initiated in nasal retina and only later spreads to temporal retina, suggesting that signals that induce ath5 expression might initially be localized to the nasal optic cup. To test this possibility, dissected optic cups were divided into nasal and temporal halves and were cultured separately. ath5 expression was observed only in nasal (n ⫽ 5 of 5; Figure 5C), but not temporal (n ⫽ 7 of 7; Figure 5D), retinal explants. These data suggest that inductive activity is localized to the nasal side of the optic cup at the 18 somite stage. ath5 Expression Is Initiated Adjacent to pax2.1Expressing Optic Stalk Tissue ath5 expression is initiated in cells adjacent to the choroid fissure—the position at which the optic stalk connects with the retina—raising the possibility that this Figure 5. ath5 Expression Is Closely Associated with pax2.1Expressing Optic Stalk Tissue (A and B) ath5 expression in eyes or CNS tissue explanted at 18 hr and cultured until 33 hr. (C and D) Nasal (C) and temporal (D) retinal tissue explanted at 18 hr and cultured until 33 hr. ath5 expression is only observed in the nasal retinal explant. The cultured retinal tissue curls around the lens making the half eyes look similar to whole eyes. (E) Wild-type eye, showing ath5 expression (blue) directly adjacent to pax2.1 expression (red). (F) Eye of a shh-injected embryo. Although the boundary between optic stalk and retina is positioned more distally in the eye (arrowheads), ath5 expression (black) is still initiated directly adjacent to the altered boundary of pax2.1 expression (red). (G) Brain of a shh-injected oep⫺/⫺ embryo. pax2.1 (red) and ath5 (blue) are rescued in adjacent domains. (H) Expression of pax2.1 in an oep⫺/⫺ brain. Expression is detected at the midbrain/hindbrain boundary (arrow) but not in the rostral forebrain. tissue may be a source of signals that induce ath5. Optic stalk cells and retinal cells that line the choroid fissure express the paired box transcription factor Pax2.1/Noi and differentiate as reticular astrocytes (Macdonald et al., 1997). Analysis of ath5 and pax2.1 expression revealed that ath5-expressing retinal cells were directly adjacent to pax2.1-expressing optic stalk/choroid fissure cells (Figure 5E), suggesting that interactions at the boundary between optic stalk and neural retina may initiate neurogenesis. To test this possibility, we experimentally manipulated the position of the optic stalk/ retinal interface. Increasing Shh activity expands the optic stalk into Retinal Neurogenesis in Zebrafish 257 Figure 6. The Boundary between Optic Stalk and Neural Retina Can Regulate ath5 Expression (A and B) Morphology of a normal eye (B) and an operated eye (A) in an embryo in which the optic stalk was ablated at 18 somite stage. On the ablated side, the ventral retina remains open (dots), whereas the choroid fissure has closed (arrowheads) on the control side. (C–E) Dorsal view of the head and dissected eyes of embryos in which the optic stalk was ablated ([C], left side, and [D]). ath5 expression is absent in the stalk-ablated eyes. (F–H) Lateral views of control eye (H) and eyes in which optic stalk tissue was ablated at the 18 somite stage (F and G). In the control eye, pax2.1 is expressed at the choroid fissure and ath5 throughout the retina. ath5 expression is absent from the stalk-ablated eyes. Faint residual pax2.1 expression is detected in cells of the ventrotemporal choroid fissure/ optic stalk (arrow, [F]) and some ventral optic stalk tissue is retained adjacent to temporal retina in (G) (arrowheads). (I–K) Dorsal view of the brain and dissected eyes of an embryo in which dextran-labeled optic stalk cells (brown) were transplanted into the temporal retina (left side in [I]). ath5 expression is restricted to the ventronasal retina in the control eye (K) but is ectopically expressed in central retina (arrowheads) in addition to ventronasal retina (arrow) in the transplant eye (J). (B), (E), (H), and (K) are printed in reverse. Abbreviations: n, nasal retina; t, temporal retina. distal regions of the optic cup and represses retinal fates, thereby repositioning the boundary between neural retina and optic stalk (Ekker et al., 1995; Macdonald et al., 1995). In shh-overexpressing embryos, ath5 expression is always initiated directly adjacent to the most distal pax2.1-expressing cells (Figure 5F). We also observed that at low efficiency, shh overexpression in oep⫺/⫺ embryos led to induction of pax2.1 in a small cluster of midline cells. In such oep⫺/⫺ embryos, ath5 expression was initiated in cells adjacent to the domain of pax2.1 expression (Figure 5G). These data suggest that the optic stalk or the boundary between neural retina and optic stalk produces signals that induce ath5 expression. This is consistent with the observation that a few pax2.1-expressing cells are present at the rostral tip of the fused eye of cyc mutants (Macdonald et al., 1995), whereas no pax2.1 expression is detected in the oep⫺/⫺ eye (Figure 5H; Hammerschmidt et al., 1996). Tissue at the Boundary between Optic Stalk and Neural Retina Can Regulate ath5 Expression To test the possibility that the optic stalk/retinal interface induces ath5 expression, we ablated tissue at this boundary either surgically or using a focused laser beam (Figures 6A and 6B). When the ablation was performed at 18hpf, ath5 expression was often absent in the retina on the ablated side at 33hpf (Figures 6C and 6D; 10 of 25 embryos), whereas normal expression was observed in control eyes (Figures 6C and 6E). Eyes in which ath5 expression was absent lacked pax2.1-expressing cells directly adjacent to the nasal retina (Figures 6F–6H), confirming that the boundary between optic stalk and nasal retina is disrupted by the operation. These data suggest that interaction between the optic stalk and nasal retina is necessary for induction of ath5 expression. Furthermore, the absence of ath5 expression in dorsal and temporal regions of eyes with optic stalk ablations suggests that the spread of ath5 expression to temporal retina is dependent upon initiation of expression in ventronasal retina. To determine if optic stalk tissue can promote ath5 expression, optic stalk cells were transplanted into temporal retina. This was a difficult operation as cells often failed to integrate into the retina. However, in some cases, ectopic ath5 expression was observed adjacent to the transplanted tissue (in three of nine embryos) at a stage when ath5 expression is normally restricted to ventronasal retina (Figures 6I–6K), suggesting that optic stalk can cell nonautonomously promote ath5 expression in adjacent neural retina. Nodal Signaling Inhibits pax2.1 and ath5 Expression Our observations suggest that Nodal signaling mediated by zygotic Oep induces prechordal mesendoderm that promotes the formation of optic stalk tissue, which in turn regulates retinal neurogenesis. However, further analysis revealed that, conversely, Nodal signaling mediated by maternal and zygotic Oep may induce inhibitors of optic stalk fate/retinal neurogenesis, probably through specification of nonaxial mesoderm. Mesendodermal derivatives are reduced but still present to various degrees in cyc, oep, sqt, and shield- Neuron 258 ablated embryos, and we have demonstrated that it is loss of anterior axial mesendoderm that is correlated with a failure to induce ath5. Nodal signaling is blocked in maternal/zygotic oep mutants (MZoep), and in such embryos there is a complete failure of induction and involution of head and trunk mesendodermal derivatives (Gritsman et al., 1999). Embryos that lack the activity of both Cyc and Sqt similarly lack mesendoderm (Feldman et al., 1998, 2000). To address the consequences of complete blocking of Nodal signaling upon retinal neurogenesis, we examined pax2.1 and ath5 expression in both MZoep embryos and in cyc;sqt double mutants. Surprisingly, we found that pax2.1 expression recovers in MZoep mutants compared to zygotic oep mutants (Figure 7A, compare to Figure 5H). Furthermore, ath5 expression is also present adjacent to the pax2.1 expression domain in MZoep mutants (Figure 7A). Similarly, ath5 is expressed in the anterior retina of sqt;cyc double mutants (Figure 7B) despite the increased overall phenotypic severity of double mutants compared to either single mutant alone. These experiments imply that in zygotic oep⫺/⫺ embryos a residual degree of Nodal signaling, dependent upon maternal Oep protein, inhibits the induction of pax2.1 and ath5 in eye tissue. To confirm that blocking Nodal activity does lead to reinitiation of pax2.1 and ath5 expression, we manipulated levels of Nodal signaling through overexpression of a Nodal antagonist. Antivin is member of the Lefty family of TGF family proteins that can antagonize the activity both of Nodals (Meno et al., 1999) and Activins (Thisse and Thisse, 1999). Injection of 1 pg of antivin RNA caused phenotypes that ranged in severity between zygotic oep and MZoep mutants (Figure 7C). In embryos that exhibited phenotypes less severe than MZoep or cyc;sqt double mutants, pax2.1 and ath5 expression was absent (Figures 7D and 7E). However, higher doses of antivin led to reestablishment of both pax2.1 and ath5 expression. Most remarkably, when very high levels of antivin were expressed (Figure 7F), pax2.1 was strongly induced in a narrow band of cells at the boundary of the eye with the brain and ath5 was expressed widely throughout the enlarged retina (Figures 7G and 7H). These results show that a reduction in Nodal signaling leads to loss of prechordal axial tissues and inhibition of retinal neurogenesis, while complete loss of Nodal signaling leads to the additional loss of other mesendodermal tissues and reinitiation of neurogenesis. One interpretation of these results is that mesendodermal tissues retained in zygotic Oep mutants inhibit retinal neurogenesis and that prechordal axial tissue normally relieves this inhibition (Figure 8C; see Discussion). Discussion In this study, we have shown that ath5, a zebrafish gene homologous to Drosophila atonal, is expressed exclusively in the retina with a pattern closely linked to neuronal differentiation. By using ath5 as a marker for retinal neurogenesis, we found that oep mutants lack ath5 expression and exhibit severely disturbed retinal differentiation. Cells in oep⫺/⫺ eyes do express early retinal markers, suggesting that the defect lies in differentiation of retinal neurons rather than in the specification of retinal identity. This suggests that specification of retinal fate is not sufficient to initiate retinal neurogenesis and that Figure 7. Depletion of Nodal/Activin Signaling Rescues pax2.1 and ath5 Expression (A) ath5 (blue) and pax2.1 (red) expression in an MZoep embryo. ath5 expression (closed arrowheads) is present adjacent to pax2.1 expression (open arrowhead) at the midline of the eye. (B) ath5 expression in a cyc;sqt double mutant embryo. ath5 is expressed at the rostal tip of the eye (arrowheads). (C–E) Whole embryo and eyes of embryos injected with 1 pg antivin RNA. Embryos exhibit a phenotype of severity between zygotic and maternal/zygotic oep mutants (C). Expression of both pax2.1 (D) and ath5 (E) is absent from the cyclopic eyes. (F–H) Whole embryo and eyes of embryos injected with more than 50 pg antivin RNA. Injected embryos have a large eye and brain sitting on the yolk with only rudimentary trunk and tail (arrow) structures (F). pax2.1 expression is present as a narrow band of cells at the interface between the eye and the brain (arrowheads, [G]). ath5 expression is widely expressed in the retina (H). additional signals are required for cells to progress from proliferation to differentiation. Our studies suggest that extrinsic signals required for initiation of retinal differentiation are indirectly dependent upon prechordal axial tissue. We observe a tight correlation between induction of ath5 expression and the presence of optic stalk tissue, suggesting that prechordal axial tissue may directly or indirectly induce optic stalk tissue that is subsequently required for induction of retinal neurogenesis (Figure 8A). Axial Tissues Regulate Retinal Neurogenesis The prechordal plate has long been known to be an important regulator of eye patterning (Adelmann, 1930). Retinal Neurogenesis in Zebrafish 259 Figure 8. Interactions Potentially Regulating Retinal Neurogenesis (A) Signals promoting optic stalk and retinal differentiation. Schematic of the brain, optic stalk (red), and retina (blue) with underlying prechordal mesendoderm (dark green). Signals from the mesendoderm may directly (blue arrows) or indirectly (green arrow) promote optic stalk fate. One indirect route may be through the induction (green arrow) of hypothalamus (pale green), which in turn promotes optic stalk fates (blue arrow). Signals (pale blue arrow) from the telencephalon (yellow) may also promote optic stalk fates (Shanmugalingam et al., 2000). Signals (white arrow) from the optic stalk may subsequently induce ath5 (dark blue) expression in ventronasal retina. ath5 expression then spreads across the retina (black arrows). The signaling events indicated are likely to be initiated at stages earlier than illustrated. (B) Sequential stages in the induction and spread of ath5. Illustrations of the neuroepithelium at the interface between the optic stalk (red) and the neural retina (blue). Signals (arrows, top panel) from the optic stalk may induce ath5 (dark blue, middle panel) in adjacent retinal cells. These ath5-positive cells may subequently promote (arrows, middle panel) ath5 expression in adjacent retinal cells, thereby propagating ath5 expression across the retina (bottom panel). (C) Differences in optic stalk/eye development between wild-type (WT), zygotic oep (oep), and MZoep and antivin-injected embryos. Schematics of dorsal views of gastrula stage embryos. Prechordal mesendoderm is dark green, posterior axial mesendoderm is maroon, and nonaxial mesendoderm is pink; prospective telencephalon is yellow, prospective eye tissue is blue, prospective optic stalk is red, neural and nonneural ectoderm is pale green, and the yolk cell is black. The relative positions of neural derivatives are simplified to reflect their approximate positions at the end of gastrulation (e.g., Varga et al., 1999). In the wild-type situation, prechordal mesendoderm may produce signals (⫹) that promote optic stalk fate by antagonizing signals (⫺) from other mesendodermal derivatives. Prospective telencephalon may also produce signals (⫹) that promote optic stalk fate. In the zygotic oep mutant, prechordal plate is transformed to notochord (Gritsman et al., 2000), and other mesendodermally derived signals (⫺) that inhibit optic stalk fate predominate. However, in the MZoep and antivin-injected embryo, all head and trunk mesendoderm is absent (Gritsman et al., 1999; Feldman et al., 2000), and so inhibition of optic stalk fate is relieved. It is required for the normal development of ventral CNS and for splitting the initially single eye field into two bilateral retinas (Li et al., 1997; Pera and Kessel, 1997). Here we show that axial tissues, including prechordal plate, appear to have at least two distinct and separable roles in retinal development. The first of these is to mediate the separation of the two retinas, and the second is to provide signals that initiate neurogenesis within each retina. These two roles are distinguished by the cyc and oep mutations, both of which affect the development of axial midline tissues. In both oep⫺/⫺ and cyc⫺/⫺ embryos, separation of the retinal fields is blocked; however, neurogenesis is only affected in oep mutants. Thus, the signals that are required to induce ath5 and initiate retinal neurogenesis are present in cyc⫺/⫺ but are absent in oep⫺/⫺ embryos. The role of prechordal plate tissue in regulating eye patterning is often interpreted as being a provider of signals that divert midline cells away from a retinal fate, thereby splitting the retinal field (Li et al., 1997). While this may be in part true, analysis of zebrafish mutants has shown that midline neurectodermal tissues also migrate anteriorly, thereby physically separating the retinal fields, in addition to providing signals that alter medial cell fates (Heisenberg and Nüsslein-Volhard, 1997; Marlow et al., 1998; Varga et al., 1999). The anterior migration of midline neural plate cells into the retinal field is blocked in cyc mutants (Varga et al., 1999), and so differences in migration of midline neural cells are unlikely to explain the retinal phenotypic differences between cyc⫺/⫺ and oep⫺/⫺ embryos. Instead, prechordal plate tissue is retained in cyc⫺/⫺ embryos but lost from oep⫺/⫺ embryos, suggesting that vertical signals from prechordal plate tissue may be sufficient to maintain neurogenesis in cyc⫺/⫺ retina. In oep⫺/⫺ embryos, the failure of axial cell movements coupled with the lack of signaling from prechordal plate may in combination lead to formation of a cyclopic retina within which neurogenesis fails to proceed. oep⫺/⫺ embryos lack endoderm (Schier et al., 1997), and the oep gene is broadly expressed in anterior ectoderm (Zhang et al., 1998), raising the possibility that defects other than in prechordal plate signaling could also contribute to the retinal neurogenesis phenotype. However, several observations suggest that axial mesendodermal defects are the primary cause of the phenotype. First, physical removal of the source of axial mesendoderm can phenocopy the retinal oep defects, indicating that the genetic status of the neural tissue is not critical. Second, ath5 expression is rescued in oep⫺/⫺ embryos when wild-type cells incorporate into hatching gland and mesenchymal cells near the eye, both likely to derive from mesendoderm at or close to the midline. The Role of Prechordal Plate in Retinal Neurogenesis Is Likely to Be Indirect Prechordal plate signals could influence ath5 expression either by directly acting upon retinal cells or by indirectly affecting the development of other tissues that subsequently affect retinal neurogenesis. The latter is more likely as ath5 expression is retained after removal of tissues around the brain 7 hr before the gene is first expressed, suggesting that prechordal plate signals are required early in development. Furthermore, ath5 expression is initiated in the complete absence of mesendoderm in MZoep, cyc;sqt, and antivin-injected embryos, implying that some other tissue must regulate ath5 expression in these embryos. Nasal optic stalk tissue may provide the signals that regulate neurogenesis. First, in wild-type, shh-injected, Neuron 260 cyc⫺/⫺, MZoep, and antivin-injected embryos, ath5 is always expressed adjacent to pax2.1-expressing optic stalk cells, wherever these may be located. Furthermore, the loss of ath5 expression in oep⫺/⫺ embryos is correlated with an absence of optic stalk cells, physical ablation of optic stalk tissue can also result in a loss of ath5 expression, and, finally, transplanted optic stalk cells can promote ath5 expression. Together, these data suggest that communication between optic stalk and neural retina is required for induction of retinal neurogenesis and that the role of the prechordal plate may be to directly or indirectly promote optic stalk development (Figure 8A). Nodal Signaling May Induce Both Tissues/Signals that Promote Retinal Neurogenesis and Tissues/Signals that Inhibit Retinal Neurogenesis One striking observation is that although reduced Nodal signaling in zygotic oep mutants is associated with a loss of pax2.1 and ath5 expression, more complete loss of Nodal signaling (MZoep, cyc;sqt, or antivin-injected embryos) restores pax2.1/ath5. This indicates that in zygotic oep⫺/⫺ embryos, residual Nodal activity inhibits pax2.1/ath5 expression. As oep⫺/⫺ and MZoep embryos both lack anterior axial mesendoderm including prechordal plate, then their contrasting eye phenotypes are unlikely to be due to differences in this tissue. Instead, the inhibition of ath5 and pax2.1 expression is likely to be dependent upon other tissues that are present in zygotic oep mutants but absent in MZoep mutants (Figure 8C). Complete loss of Nodal signaling leads to a failure in induction and involution of all head and trunk mesoderm and endoderm (Schier and Shen, 2000). Inhibition of ath5/pax2.1 expression could therefore be dependent upon signals from posterior axial tissues or paraxial mesoderm, both of which are present in zygotic oep mutants but are absent in MZoep mutants. If the prechordal mesendoderm normally antagonizes the activity of other mesendodermally derived signals, then its role would become redundant and pax2.1/ath5 expression would be restored in the absence of all mesendoderm in Nodal-deficient embryos. One consequence of the loss of all mesendoderm is anteriorization of the ectoderm such that prospective telencephalon (Gritsman et al., 1999) and eye (this study; Thisse et al., 2000) are both enlarged. This may be due to the loss of posteriorizing signals normally derived from nonaxial mesendoderm. pax2.1 expression in the optic stalk is in part dependent upon fgf8, most likely derived from adjacent telencephalic cells (Shanmugalingam et al., 2000), suggesting that both axial midline signals and anterior neural plate signals may act in concert to promote optic stalk fate. The enlargement of anterior neural plate domains in embryos lacking Nodal activity may thus provide an alternative source of signals that rescue pax2.1 and ath5 expression (Figure 8C). Optic Stalk Tissue May Act Nonautonomously to Regulate Retinal Neurogenesis ath5 expression is initiated adjacent to pax2.1-expressing cells that appear to be both required and sufficient to promote ath5 expression. Although pax2.1 expression is closely associated with ath5, Pax2.1 itself is not required for the regulation of retinal neurogenesis. noi⫺/⫺ embryos carrying a null mutation in the pax2.1 gene exhibit a failure in closure of the choroid fissure but exhibit apparently normal ath5 expression and retinal differentiation (Macdonald et al., 1997; data not shown). Furthermore, ectopic expression of pax2.1 in the dorsal retina does not lead to induction of ath5 expression (data not shown). Mutations affecting Fgf8 signaling also affect the development of the optic stalk, yet ath5 expression and retinal differentiation are again not very severely affected (Heisenberg et al., 1999; Picker et al., 1999; Shanmugalingam et al., 2000; data not shown). Both Pax2.1 and Fgf8 are members of large gene families, and it remains a possibility that they act in concert with other related proteins to regulate retinal neurogenesis. Indeed, in vitro, Fgfs can promote retinal neurogenesis (McFarlane et al., 1998), and further analyses will be required to determine if they have comparable roles in vivo. Mechanisms Regulating Neurogenesis in the Eyes of Vertebrates and Flies May Be Conserved In zebrafish, ath5 expression and neuronal differentiation are initiated ventronasally and subsequently spread to dorsal and temporal retina (this study; Raymond et al., 1995; Laessing and Stuermer, 1996; Schmitt and Dowling, 1996). Indeed, successive waves of neurogenesis spreading from nasal to temporal retina generate retinal ganglion and amacrine cells, bipolar and horizontal cells, and finally photoreceptors (Hu and Easter, 1999). These waves of neurogenesis are reminiscent of the neurogenic wave that occurs as the morphogenetic furrow sweeps across the imaginal disc generating neurons in the developing Drosophila eye. Regulation of the neurogenic wave in the eye of Drosophila is based upon cycles of non-cell-autonomous activation of atonal by Hh and cell-autonomous activation of hh by Atonal (Heberlein and Moses, 1995). ath5 is the closest vertebrate homolog of atonal, and, as ath5 predicts the wave of neuronal differentiation, it is tempting to speculate that the zebrafish gene may play a role comparable to its fly counterpart. Although Hedgehog proteins may play a role in retinal development (Levine et al., 1997), as yet it is unclear if a wave of Hh activity spreads across the vertebrate retina. The neurogenic wave in the fly eye is regulated by a successive relay of short-range signaling events, and our studies suggest that ath5 expression in dorsal and temporal retina is dependent upon initiation of ath5 expression in ventronasal retina. This raises the possibility that a similar relay of short-range signals is involved in the progression of retinal neurogenesis in zebrafish (Figure 8B). However, at this stage, we cannot exclude the possibility that signals from the optic stalk or ventronasal retina act over a long distance to influence neurogenesis. Waves of retinal differentiation have been reported in vertebrates other than fish, with neurogenesis generally proceeding from central to peripheral retina (e.g., Prada et al., 1991). However, it has recently been shown that the progression of retinal ganglion cell differentiation in the chick retina does not depend upon the presence of earlier differentiated neurons, suggesting that the spread of neurogenesis is regulated by a cell intrinsic mechanism (McCabe et al., 1999). However, in fish, the wave of ath5 expression occurs much earlier than any Retinal Neurogenesis in Zebrafish 261 waves of neuronal differentiation, suggesting that inductive signals may already have spread throughout the retina by the stage that the first neurons differentiate. Further elucidation of the molecular pathways underlying the regulation of retinal neurogenesis will undoubtedly reveal the extent of conservation of these pathways between species. Experimental Procedures Fish Zebrafish (Danio rerio) were maintained at 28.5⬚C on a 14 hr light/ 10 hr dark cycle, and embryos were collected by natural spawning. oeptz57,oepz1, cyctf291, and cycb16 alleles were used (Hatta et al., 1991; Brand et al., 1996; Hammerschmidt et al., 1996; Schier et al., 1997). Isolation of ath5 and In Situ Hybridization A zebrafish somite stage cDNA library (a gift of Dr. Grunwald) was screened at low stringency with Xath5 using standard procedures. cDNA clones were subcloned into pBluescript II SK⫹ (Stratagene) and sequenced. In situ hybridizations with ath5 and other probes were carried out using standard procedures (Macdonald et al., 1995). Antibody Labeling Standard procedures were used (Wilson et al., 1990) with anti-Pax6 (Macdonald et al., 1995) at 1:400; FRet43 antibody (Larison and Bremiller, 1990) at 1:10; anti-acetylated ␣ tubulin antibody (Sigma) at 1:1000; anti-GABA (Sigma) at 1:500; and anti-phosphorylated histone antibody (Upstate biotechnology) at 1:500. Sectioning Embryos incubated in 0.003% phenylthiourea to inhibit pigmentation were fixed, dehydrated to 100% ethanol, embedded in JB4 resin (Agar Scientific Ltd), and sectioned (5 m–10 m) using a tungsten knife on a Jung 2055 Autocut. For cryosectioning, fixed embryos were transferred to 20% sucrose in phosphate buffer, mounted in OCT compound, and sectioned at 8 m on a Microm cryotome. Tissue Ablations For shield ablations, embryos at 50% epiboly stage were dechorionated, washed with 1/3⫻ Ringer’s solution, and transferred to embryo-sized holes in agar. Glass capillaries pulled to fine tips were broken with a razor blade such that the diameter of the tip corresponded to the size of the embryonic shield. The capillary needles were filled with oil and placed on the shield, and slight suction was applied until the shield region was removed. Shield-extirpated embryos were incubated in 1⫻ Ringer’s solution for 30 min after the operation, then transferred to 1/3⫻ Ringer’s solution at 28.5⬚C until fixation. For optic stalk ablations, 18 somite embryos were mounted in 3% methyl cellulose in 1⫻ Ringer’s solution under compound microscope optics. Cells at the boundary between optic stalk and neural retina were ablated by laser (Micropoint Ablation Laser System, Dye: Coumarin 440, Zeiss; N2 laser: YSL337ND, Laser Science, Inc.) or with tungsten needles, after which embryos were left to develop in 1⫻ Ringer’s solution. Cell Transplantation Cells from wild-type embryos injected with rhodamine-dextran (5% in 100 mM KCl) were transplanted into late blastula stage oep⫺/⫺ embryos. Locations of the transplanted cells were determined by confocal laser scanning microscopy at 24 hr (LSM 510, Zeiss), and embryos in which wild-type cells were incorporated into retina, telencephalon, hatching gland, prechordal plate, or heart were selected for further analysis. Embryos were fixed at 33 hr, and ath5 expression was analyzed. For optic stalk transplants, donor embryos were labeled with a mixture of rhodamine–dextran (5% in 100 mM KCl) and biotin-dextran (3%). Embryos at 20 hr of development were dissected, and optic stalk tissue was isolated with tungsten needles. Dissected optic stalk tissue was transplanted into the caudal retina of host embryos using glass capillary needles. Transplanted embryos were fixed at 25 hr and analyzed for ath5 expression and the location of biotin (Vectastain detection kit). In Vitro Culture of Dissected Eyes Embryos at 18 somite stage were dissected in L15 medium with tungsten needles. After separation of the head, the skin, prechordal plate, and mesenchyme were removed from the brain and eyes. In some cases, optic cups were isolated from the diencephalon by cutting the optic stalk. Dissected eyes and eyes attached to forebrains were incubated at 28.5⬚C in L15 medium without serum, fixed at 33 hr, and labeled with an RNA probe to ath5. Acknowledgments We thank Frédéric Rosa for providing TARAM-A-injected oep embryos, Monica Vetter for providing Xath5, Alex Schier and Will Talbot for providing embryos, and other colleagues for providing reagents. This study was supported by funds from the Ministry of Education, Science, and Culture of Japan to I. M., a RIKEN BSI Grant (no. 116) to H. O., and grants from the Wellcome Trust, EC, and BBSRC to S. W. W., who is a Wellcome Trust Senior Research Fellow. Received February 10, 2000; revised June 15, 2000. 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