International Archives of the Photogrammetry, Remote Sensing and Spatial Information Science, Volume XXXVIII, Part 8, Kyoto Japan 2010 QUALITATIVE ASSESSMENT OF INLAND AND COASTAL WATERS BY USING REMOTELY SENSED DATA Asif M. Bhattia, *, Donald Rundquistb, John Schallesc, Mark Steeled, Masataka Takagie a,e Department of Infrastructure Systems Engg., Kochi University of Technology, Kami-City, Kochi, 782-8502, Japan. b,d Center for Advanced Land Management Information Technologies (CALMIT), School of Natural Resources, University of Nebraska-Lincoln, Lincoln, USA. c Biology Department, Creighton University, Omaha, NE, USA. *asifmumtaz.bhatti@kochi-tech.ac.jp Commission VIII, WG VIII/4 Key words: Total suspended sediments, Chlorophyll-a, Secchi depth, Remotely sensed data Abstract: The prime purpose of the research study was to elucidate the potential of remotely sensed data for estimation of water quality parameters (WQPs) in inland and coastal waters. The useful application of remotely sensed data for operational monitoring of water bodies demand for improved algorithms and methodology. The in situ hyperspectral Spectroradiometer data, water quality data and Airborne Imaging Spectroradiometer for Applications (AISA) data of Apalachicola Bay Florida, USA were collected. The data was analyzed to develop the models for assessment of total suspended sediment (TSS), chlorophyll-a (chl-a), and secchi depth. The analysis of collected spectral data reveals that a peak reflectance in red domain was well correlated with chlorophyll-a concentration. The optical depth is found to be strongly correlated with Chl-a and TSS. In order to examine the feasibility of multispectral data for water quality monitoring; AISA data was integrated into band widths of ALOS/AVNIR-2 sensor. The combination of three bands, band 2, 3 and band 4 was developed to correlate the remotely sensed data with TSS. The developed regression models showed good correlation with water quality parameters and may successfully applied for estimation of WQP in surface waters. The research work demonstrates an example for the successful application of remotely sensed data for monitoring the distribution of water quality parameters in water bodies. From the perspective of remote sensing, waters can generally be divided into two classes: case-I and case-II waters (Morel, 1977). Case-I waters are those dominated by phytoplankton (e.g. open oceans) whereas case-II waters containing not only phytoplankton, but also suspended sediments, dissolved organic matter, and anthropogenic substances for example some coastal and inland waters (Gin, 2003). Remote sensing in case II waters has been far less successful. Many scientists have pointed out that this is mainly due to the complex interactions of four optically active substances in case-II waters: phytoplankton (chl-a), suspended sediments, coloured dissolved organic matter (CDOM), and water (Novo et al., 1989; Quibell, 1991; Lodhi et al., 1997; Doxaran et al., 2002). The spectral characteristics of different water bodies and at different sampling points of the same water body are not same. Optically active components in the water bodies influence is qualitative and quantitative nature of the spectral signatures. The main components responsible for change in spectral signatures are yellow substance, phytoplankton pigments, and non living suspended matters and water itself. Remote sensing of water-constituent concentrations is based on the relationship between the remote-sensing reflectance, and the inherent optical properties, namely, the total absorption and the backscattering coefficients (e.g., Gordon et al., 1988). Chl-a concentration and total suspended solids (TSS) are two important water quality variables influencing the qualitative and quantitative nature of the spectral signatures. The objective of present research is to develop relationships between water quality parameters (WQPs) and remotely sensed data (RSD) and to elucidate the spatial and temporal variation in chlorophyll-a concentration and TSS in Apalachicola Bay, Florida. The potential of simulated multispectral remote sensing data for delineation of WQPs was comprehensively examined. 1. INTRODUCTION Assessment of water quality parameters in water bodies is one of the most scientifically relevant and commonly used application of remote sensing. Water quality monitoring requires regular and relevant observations which cannot be obtained by conventional field monitoring campaigns. Remotely sensed data with high spatial resolution and frequent acquisition frequency offer solution to monitor variability of water quality parameters up to several times per year. Application of remotely sensed data allows to discriminate between water quality parameters and to develop a better understanding of light, water and substances interactions. Hyperspectral remote sensing allows accurate and potential use of entire range of electromagnetic spectrum recorded in extremely narrow wavebands for monitoring water quality on multiple sites in water bodies. The operational monitoring and useful application of remote sensing in water bodies demands for improved methodology and sophisticated algorithms. Most of the satellite sensors record data in only a few broad spectral bands, the resolutions of which are too coarse to detect much of the spectral ‘fine structure’ associated with optically active substances in water (Goodin et al. 1993). The successful quantification of water quality parameters using remote sensing is affected not only by the type of waters under investigation, but also by the sensor used (Liu et al. 2003). The remotely sensed techniques for operational monitoring and management of water quality parameters (WQPs) depend on the substance being measured, its concentration, influencing environmental factors and the sensor characteristics. Effectiveness of remotely sensed data in water quality assessment of different water bodies has been examined by numerous researchers (Han, 2006; Dekker, 2001; Gitelson, 2007, etc.). 415 International Archives of the Photogrammetry, Remote Sensing and Spatial Information Science, Volume XXXVIII, Part 8, Kyoto Japan 2010 standard, simultaneously with incident irrradiance (Ecal).. Solar zenith anggles ranged from m approximately 20° to a maxim mum of 55°. Meassurements were taken t over opticaally deep water and an average of o 10 consecu utive spectra was w used. Thee term reflectancee is defined as the ratio betweeen a reflected and a an incident quuantity of light. The ratio can coonsist of two raddiances, two irraddiances, or rad diance and irraadiance (Aas, 2009). Percentagee spectral reflecttance R() was computed c as: 2. STUD DY AREA The Apalachicola National Estuuarine Research Reserve, 1 of 255 sites designatedd by the Natioonal Oceanic annd Atmosphericc A Administration, covers approxim mately 246,766 acres (figure 1)) B is connectedd and has an averaage depth of thrree meters The Bay t the Gulf of Mexico to M throughh four major inllets: Indian Passs and West Pass at the western end, and East Pass P and Lanarkk R Reef at the easteern end. Most of o the freshwaterr discharged intoo t Bay flows from the fr the Apalachhicola River (W Wang et al. 2010)). W Water in the Baay is moderatelyy stratified. The substrate of thee B is predominnately soft silt and Bay a clay with so ome sandy areass (Dardeau et al. 1992). Apalachhicola Bay is a river-dominated r d, b bar-built shallow w estuary. It recceives freshwaterr flows from thee A Apalachicola, C Chattahoochee, and a Flint Riverr system (ACF)), w which drains over o 60,000 km m2 of Georgia,, Alabama, andd F Florida (Livingsston 2006). Tides in Apalachicolla Bay are mixedd, w an uneven high and low tide and a range of 0.2 to 0.6 m with (Huang et al. 2002). Water quuality in estuarinne ecosystems iss ny natural and annthropogenic factors. affected by man %R(O) [L(O)u / E(O)innc]u[E(O)cal / L(O)cal]u R(O)cal u100 R()cal is the reflectance of the Specctralon panel liinearly o each radiometter. At interpolateed to match the band centers of each statioon a standard set s of water quuality parameterrs was measured. Samples were filtered to estim mate chlorophylll-a by meethods. TSS was deterrmined spectrophootometric gravimetriically using pree-ashed and tareed filters. Filterrs and retained particulate matterr were dried (600 °C for at leastt 24 h) d field cam mpaign and reweiighed. The data was collected during d Land carried ouut by the field crew of Centerr for Advanced Managemeent Information Technologies (CALMIT), ( Schhool of Natural Reesources, Univerrsity of Nebraskka-Lincoln, USA A. Param meters Minn Max Chl-a (μgg/l) 2.6 6 21.1 Seston (m mg/l) 2.4 4 28.7 Secchi Depth D (m) 0.35 0.35 Water Depth (m) 1 5.45 Avg SD 4..8 7.1 5.5 11.7 12.0 8.4 0..9 0.8 0.3 1..8 1.9 0.9 Med Table 1. Descriptive statistic (Minimum,, Maximum, Meedian, Averagge, Standard Deviation) of meassured water quallity parameters 3.2 Airborne Imaging Spectroradiome S eter for Appliccations (AISA) Data Visible to near infrared (NIR) ( hyperspecctral airborne im maging s Spectroraddiometer is a vaaluable technology for remote sensing of the eartth’s surface becaause of its combination of good spatial and spectrral resolution. Hy yperspectral rem motely sensed daata was acquired bby an aerial rem mote sensing plattform. The instrrument array inclluded an AISA A Eagle hypersspectral imagerr from Visible to Near Infrared (VNIR). The AISA A Eagle is a solidstate, pussh-broom instruument that haas the capabiliity of collecting data with high h spatial and sppectral resolutionn. The e is 390 to 1000 1 nm in up to 512 spectral raange of AISA eagle bands. The sensor has an Inertial Navigattion System (INS) and m) DGPS in orrder to (Differentiial Global Posiitioning System provide sppatially accurate data. The AISA A Eagle pre-proccessing software provides for the t automatic geometric correection, g, and calculaation of at-platform rectificatioon, mosaicking radiance by b applying calib bration coefficien nts referenced to o wellcharacterizzed spectroradioometric targets (Mishra, 2007)). The algorithm uses the DGPS and attitude infoormation from th he INS to perforrm geometric, georeferencinng and mosaaicking operationss (Makisara et al., a 1994). AISA A Eagle data ussed for the presennt study were accquired in the sp pectral range of 400 to 980 nanom meter between 0330 0 and 0430 h (CST) on 3rd and a 4th April 20066 when the solaar zenith angle was w close to 70 0o. The sensor altiitude was (2.0733 km), and the image i was acquuired at nadir at a spatial resolutioon of 2 m and sp pectral resolution n of 62 bands. Grround data indiicated low winnd (~ 3 m s-1), high visibility (40 ( km), and cleear skies. The site selected from m flight Figure 1. Map showing the reseearch study Areaa: Apalachicola Bay, Florida F 3. MATERIA AL & METHOD D 3 In situ meaasurements 3.1 Two independeent in situ dataasets were colleected for model calibration and validation v respecctively. The grouund truth data off A Apalachicola B Bay included water w sampling for laboratoryy analysis (e.g. chl-a c and sestonn), on-site meaasurements (e.gg. Secchi depth, water w depth), weather w observattions (e.g. windd speed and skky condition) and upwellingg radiance andd downwelling irrradiance hypersppectral data. Two pairs off Ocean Optics USB 2000 0 hyperspectraal r radiometers waas used (the duaal headed systeem, i.e., upwardd looking and downward lookiing Ocean Opttics sensor) forr welling irradiancee acquiring upwellling radiance L(()u and downw E inc just ab E() bove and below the waterr surface. Thee h hyperspectral daata was collectedd in the spectral range of 400 nm m t 900 nm. To to T match their transfer functions, the intercalibration of th he radiometer was w accomplisheed by measuringg t upwelling raadiance (Lcal) off a white Spectrralon reflectancee the 416 International Archives of the Photogrammetry, Remote Sensing and Spatial Information Science, Volume XXXVIII, Part 8, Kyoto Japan 2010 lines covered ann area of approx ximately 1.6 km m2 in the vicinityy of Apalachicolaa Bay. The imaage data were converted c to atp platform radiannce by applyinng the calibrattion coefficientss p provided by AIS SA processing so oftware ‘Caligeo o’ for subsequennt p processing. remotely sensed data weere analyzed in a systematic manner. m The colleccted spectrum shhows that the quualitative nature of the acquired ssignals are same,, however, the quuantitative naturre vary from pointt to point in the water w body. 3 Atmospherric correction 3.3 The radiance received r by a sensor, Lt(i), at the top of atmosphere (TO OA) in a spectrall band centered at a wavelengthh, i can be dividedd into the follow wing components (Gordon et al., 1983): Lt ( Oi ) L r ( O i ) La ( O i ) T ( O i ) L g ( O i ) t ( O i ) L w ( O i ) Where Lr(i) annd La(i) represents radiances generated alongg W t optical pathh in the atmospphere by Rayleeigh and aerosol the scattering respeectively; Lg(i) is i contribution arising a from thee specular reflectiion of direct sun nlight from the sea surface or thee sun glint compoonent; Lw(i)is deesired water leaaving radiance; T is direct atmosphheric transmittannce; and t is difffuse atmosphericc t transmittance off the atmospheree. The goal of atmospheric correction c is to t remove thee contributions off scattering in the atmospheree and reflectionn from the water surface from thee TOA radiancees measured by a A Eagle dataa sensor in the viisible region of the spectrum. AISA w were atmospherrically correctedd by using FLAA ASH (Fast Lineof-sight Atmosp pheric Analysis of o Spectral Hypercubes), a first-p principles atmosspheric correctioon algorithm for visible to nearr infrared (NIR) hyperspectral data. FLAAS SH atmosphericc M codde and typically consists of threee correction uses MODTRAN steps (Matthew w et al., 2003). FLAASH usees the standardd equation for speectral radiance att the sensor leveel, L, in the solarr w wavelength ran nge (neglecting thermal emission) from a flaat L Lambertian surfface or its equivaalent (Vermote et e al., 1994). Figure 2. Sub-surface S hyp perspectral reflecctance of Apalacchicola Bay, USA Figurre 3. AISA reflecctance of Apalacchicola Bay, USA A A R B Re La (1 R e S ) (1 R e S ) W Where R is pixxel surface reflecctance, Re is surrface reflectancee averaged over the pixel and a surrounding region, r S = thee do of the atm mosphere, La = the radiancee spherical albed b backscattered by b the atmosphere, and A and a B are thee coefficients thaat depend on atmospheric and geometricc conditions but not on the surrface. Each of these variabless depends on thee spectral rangee of the selected channel; thee w wavelength inddex has been om mitted for simpplicity. The first t term in above eqquation correspoonds to radiancee that is reflectedd from the surfacee and travels direectly into the sen nsor. The secondd t term correspondds to radiance frrom the surface that t scattered byy t atmosphere into the sensor,, resulting in a spatial the s blendingg, mage processingg or adjacency, effect. ENVI 4.3, digital im u to process the AISA data. The image wass software, was used first geometricaally rectified to o UTM (Univeersal Transversee M Mercator) projjection (Zone 16; Datum: WGS84). Thee geometrically annd radiometricaally corrected AISA A image wass u used in the analyysis. L The amouunt of TSS presennt in the water body b defines thee water category. Chlorophyll-a concentration and TSS werre not correlated well (Figure 4)) with the determ mination coefficient of linear relaationship R2 < 0.33. 0 It depicts that t chl-a was not n the only charaacteristic controllling water quality, confirming th hat the waters bellonged to typicall case-II water grroup (Gitelson, 2008). 2 F Figure 4. Correllation between chhl-a and TSS 4 MODEL DE 4. EVELOPMENT T meters in case II waters The abilityy to monitor watter quality param requires hhigh resolution remotely sensed data and su uitable techniquess to examine thee diverse nature of optical constituents present inn the water body. b Band raatio algorithms were developedd to establish thee relationship beetween the refleectance and selectted water qualitty parameters. Band-ratioing B did d not universallyy give the best results but in many m cases did; band ratioing has been suggestted as the most appropriate app proach The sub-surfacee spectral reflecctance and atm mospherically aree depicted in figuure 2 and figurre 3 respectivelyy. The acquiredd spectral data of the Apalachiccola bay, USA represents first r reflectance peakk in the green domain near 550 5 nm and thee second reflectan nce peak in the red domain show wing turbid waterr w with low CDOM M. The peaks near 700 nm clearly c proof thee p presence of chllorophyll in the bay. The field, laboratory andd 417 International Archives of the Photogrammetry, Remote Sensing and Spatial Information Science, Volume XXXVIII, Part 8, Kyoto Japan 2010 elsewhere (Leg gleiter et al. 20005). In order to t elucidate thee p potential of muultispectral rem mote sensing foor water qualityy m monitoring, the AISA data is integrated in too band width of A ALOS/AVNIR/2 2 sensor as folloow; Band 1 Band 3 500 ³ ³ 420 6900 610 R ( O )d O Band 2 R ( O )d O Band 4 ³ ³ 600 520 890 760 o optically active In case 2 waters, the presence of other constituennts (OACs) effeect the nature of o the signals an nd the discriminaation in these con nstituents is com mplex. Dall'Olmo o et al., 2003 provvided evidence that a three ban nd reflectance model, m originally developed fo or estimating pigment p conten nts in b used terrestrial vegetation (Giteelson et al., 2003), could also be m relates piigment to assess chl-a in turbidd waters. The model concentrattion to reflectancce R(i) in three spectral bands i: Pigment concentration = R750*(R670-1-R7000-1) R ( O )d O R ( O )d O 4 Chlorophyyll-a 4.1 IIn case I waterss, concentration ns of chlorophylll-a can be quitee satisfactorily esstimated with satellite imagees by using ann empirical modeel and interpreeting the receivved radiance at a different waveleengths (Gordon and Morel 19883). However, inn case II waters ow wing to complexxity of the waterr constituents thee r retrieval of chl-aa is difficult taskk and needs advvance techniquess and approaches.. The pronounceed scattering/abssorption featuress of chlorophyll-aa are: strong absorption a betweeen 450–475nm m (blue) and at 67 70nm (red), and d reflectance maaximums at 5500 n (green) and near nm n 700nm (Reed Peak). A varieety of algorithmss h have been deveeloped for retrievving chl-a in tuurbid waters. Alll are based on thee properties of thhe reflectance peeak near 700 nm m and the ratio off that reflectancee peak to the reeflectance at 6700 n (Gitelson et al., 2008). Gitellson, 1992 studieed the behaviourr nm nce peak near 700nm 7 and conncluded that thee of the reflectan 700nm reflectannce peak is impo ortant for the reemote sensing of inland and coasttal waters with regard r to measurring chlorophylll. H Han, 2005 poin nted out that hee spectral regionns 630–645 nm m, 660–670 nm, 6880–687nm and 700– 735 nm were w found to bee p potential region ns where the fiirst derivatives can be used too estimate chlorophyll concentraation. Dekker, 1991 mentionedd t that the scatterinng and absorptioon characteristicss of chlorophyll-a can be studdied when moore than one band is usedd. H Hoogenboom e al., 1998 dettermined that a ratio using ann et A Advanced Visibble–Infrared Im maging Spectrom meter (AVIRIS)) b band located neaar 713 nm with the band at 667nnm was the most sensitive for chlorophyll retriev val for inland waters. w A similarr r ratio (R674/R705) has been demonnstrated to be opptimal for inlandd d Kaufmann, 2000). Three typess lakes and riverss (Thiemann and of independent variables weree tested: singlee spectral bandd, r ratios of spectraal bands, and combinations of multiple m bands too develop linear regression eqquations and r2 values weree computed. hip b/w chl-a annd 3 band model Figgure 6. Relationsh f The develooped model is off the following form; -1 -1 1 Chl a ( Pg / l ) m[ R 750 * (R 670 - R 700 )] n ; where m and n are empirical coefficientts. NIR-2 (Band3/Band1) is The relatioonship between chl-a and AVN demonstraated in figure 7. Figurre 7. Relationshiip b/w chl-a andd AVNIR-2 band ds reflectance ratio f The develooped model is off the following form; m n Chl a (Pg / l) m[Log(B3 / B1 )]2 n[Log(B3 / B1 )] l ;where m, and l are empirical e coefficcients. 4.2 Totall Suspended Ma atter (TSM) TSS conccentrations reguulate light attennuation in inlannd and estuarine systems. In coastal c waters, light scatterin ng by suspendedd particles stronngly affects lighht propagation in the water coluumn (Lee et all., 2005), and determines d to a large extent the magnitude of surface s reflectannce (Sathyendran nath et d McKee, 200 04 demonstrated the al., 19899). Miller and applicationn of MODIS (Teerra) 250m data to quantify TSS S using a linear rregression moddel relationship established beetween MODIS bband-1 (620–67 70nm) and in situ s measuremeents of concentrattions of inorgaanic-dominated TSS in the coastal c northern Gulf of Mexiico. Water collour associated d with estuarine systems is typiccally characterizzed by high levvels of M and chloro ophyll, total susppended solids (TSS), CDOM exhibiting a complex mixture of contributing colour R b/w w chl-a and reflecctance ratio Figure 5. Relationship IIt was observed that the ratio off R700/R675 is welll correlated withh T developed model m is of thee chlorophyll-a concentration. The following form; m Chl a ( P g / l ) m ( R 700 / R 675 ) 2 n ( R 700 / R 675 ) l ; where m, n and l are empiirical coefficientts. 418 International Archives of the Photogrammetry, Remote Sensing and Spatial Information Science, Volume XXXVIII, Part 8, Kyoto Japan 2010 constituents (Buukata et al., 199 95). Total suspennded matters (orr s seston) represen nt living organicc matter (mainlyy Phytoplankton)) and inorganic suspended s solidds (tripton). Triipton (Inorganicc m material & detriitus) mainly conttribute to scatterring of light withh low absorptionn. Absorption is i normally neglected for thee inorganic particcles such as suuspended sedim ments. Empiricaal r relationships beetween spectral properties and total suspendedd m matter showed good g correlation n with NIR/Green band ratio ass illustrated in figure 8. The develloped model is as a follow; is found too be well correlaated with reflecttance ratio of R750 7 /R560 (NIR/Greeen). The simplee band ratio techhnique is effecttive in monitoringg SD by means of o remotely senssed data. Figure 100. Relationship b/w b secchi depth h and reflectancee ratio SD (m) m( R750 / R560 ) n ; where m and n are emppirical coefficientts. Figure 8. Relationship betweeen TSS and refllectance ratio TSM ( mg / l ) CLUDING REM MARKS 5. CONC m ( R815 / R560 ) n ; Wheere m and n aree Remote seensing is propoosed as a usefu ul tool for monitoring water quallity parameters up u to several tim mes per year andd offer valuable data d on the seasonal variability of water quality y. The research work w demonstrattes the feasibilityy of hyperspectrral and multispecttral remotely seensed data for monitoring m the spatial and tempooral variations of o water quality parameters. Thee band ratio apprroach is effectivve for developm ment of water quality q algorithmss and to minnimize the efffect of confouunding environmeental variables. It I was found thaat the simple twoo band reflectancee ratio R700/R670 is well correlated with chl-a concentrattion. The threee band model R750*(R670-1-R7000-1) is found to be b predictor of chl-a concentrattion in case-II waters. w The logarithmic ratio of ALOS/AVNIR--2 band 3 and band b 1 ncentration in thee study area. How wever, was related with chl-a con mplexity of wateer and wide bannd width, the accuracy due to com was not hhigh. The ratio of NIR and green g domain is i best predictor of o TSS. In casee of multispectraal remote sensin ng, the developedd 3 band modell including ALO OS/AVNIR-2 band 4, band 3 annd band 2 is welll correlated witth TSS. Empiriccal and semi-empiirical algorithm ms are easy too use; howeveer, the coefficientts used in empirrical algorithms are derived from m data sets that do d not necessarilly represent all natural n variationns. The developedd algorithms are based on the lim mited data set. More M in situ water quality data, hyp perspectral data and multispectral data d validated the models. m Moreov ver, the is needed to calibrated and q variabless in the spatial andd temporal variaability of water quality Apalachicola Bay needss investigation. It is importaant to a as ann integral part off water incorporatte water quality assessment resources and environm mental planningg and manageement. ol for Remotely sensed data is effective annd efficient too q parametters in monitoringg the distributiions of water quality inland andd coastal waters and to suppo ort water manag gement strategies. empirical coefficcients. The relationship p between chl-a and AVNIR-2 (Band ( s 3/Band1) is demonstrated inn figure 9 and thee model is shownn below. Figure 9. Relatiionship b/w TSS S and ALOS/AV VNIR-2 (3 band) reflectannce ratio TSS(mg/ l) m[(B4 B2 ) /(B3 )]2 n[( [ B4 B2 ) /(B3 )]l ; where m, n a l are empiriical coefficients. and 4 4.3 Secchi Deepth (SD) The measuremeent of water trannsparency has beeen attempted byy v various method ds, most commoonly based on light l attenuationn p principles (Mob bley 1994). The estimation e of ligght attenuation inn w water bodies is not n a trivial task k, and therefore simpler methodss h have been propposed for the operational o estim mation of waterr t transparency (G Gomez, 2009). Th he best known iss the Secchi discc, w which is a black k and white discc 20 cm in diam meter that is usedd t estimate wateer transparency visually, to v by meaasuring the depthh at which the dissc is no longer visible. The maain problem withh estimating wateer transparencyy with the SD D is the spatiaal significance of the t samples, wh hich are expensive to obtain andd r refer to single-ppoint measuremeents. Remote seensing can be ann ideal tool for monitoring m water transparency. 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