BIOL A502 Eukaryotic Cellular and Molecular Biology Credit: Dr. William H. Jackson SBDG 201A 641-3601 TTh, 9:25AM – 10:40AM in SBDG 200 Three semester hours Note: BIOL A502 is a writing intensive course. Instructor: Office: Telephone: Lecture: Office Hours: Email: Course Text: Supplemental texts: Fall 2015 Syllabus By appointment billj@usca.edu The Cell, A Molecular Approach, 6th Ed. by Cooper and Hausman Writing Papers in the Biological Sciences., 5th Edition by McMillan Course Description: A study of the principles of eukaryotic cellular and molecular biology. Three lecture hours per week. Course Objectives: This course is designed to introduce the concepts and underlying principles of eukaryotic cellular and molecular biology. Upon completion of this course students will be expected to 1. 2. 3. 4. 5. 6. 7. 8. Describe the basic properties of eukaryotic cells; List and describe the function of the major biological molecules; Describe the basic function of cellular organelles and structures; Describe DNA replication, repair, and expression; Discuss the nature of gene regulation; Describe the processes of protein synthesis, processing, and regulation; Discuss the nature of cell signaling; and Analyze and summarize papers from the primary literature. Attendance Policy: An “F” may be assigned for absences in excess of 25% of regularly scheduled class meetings. Absences, neither excused nor unexcused, absolve the student from meeting class assignments. Exam make-ups will only be allowed for documented, excusable reasons. Quizzes cannot be made up. Disability Statement: If you have a physical, psychological, and/or learning disability that might affect your performance in this class, please contact the Office of Disability Services, B&E 134, (803) 643-6816, as soon as possible. The Office of Disability Services will determine appropriate accommodations based on documentation. Policy for Portable Electronic Devices: The use of any portable electronic devices, including cell phones, pagers, MP3 players, iPods, etc., during class is not allowed for any reason unless prior approval has been given to a student from the instructor or unless required for the course. If you are planning to have any of these devices in class, they must be turned off and stowed away for the duration of the class period. If you use a portable electronic device during a test, quiz, or other assessment, you are eligible to receive a failing grade on that assignment. Methods of Presentation and Evaluation: Information will be presented through lectures and class discussion using appropriate visual aids. Writing assignments will be used to extend the lecture material. There will be three 1-hour exams, a comprehensive final exam, and weekly quizzes that will generally cover the previous 1-2 week’s material. Three Blackboard exams will also be used to student mastery of three chapters. Writing assignments will include reviews of the primary literature, and a research paper based on a question in eukaryotic cellular/molecular biology. WI Designation: Eukaryotic Cellular and Molecular Biology is a designated writing intensive course (BIOL A502-WRI). The goal is use writing as a learning tool. Writing will be assessed using discussion exam questions and specific writing assignments. During this course we will answer the following questions: How do you write a good discussion? How do you efficiently summarize the primary literature? How do you ask a good question? How do you develop a thesis? How do you create a well-crafted scientific paper? Writing Assignments: Below is a brief overview of the writing assignments for which you will be responsible during the semester. More complete descriptions and tasks will be provided separately. Written products will be evaluated based on one of two rubrics that will be provided with each assignment. Multiple revisions are encouraged during the writing process, and should be based on both peer reviews and conferences with the instructor. Research paper. Your research paper will be on a question or problem of your choosing in eukaryotic cellular/molecular biology. Revisions will be allowed (and expected) based on peer reviews and conferences with the instructor. -1- BIOL A502 Eukaryotic Cellular and Molecular Biology Fall 2015 Syllabus Research summaries. You will be assigned seven primary research articles from your research paper’s bibliography to summarize. The basis of student evaluation is shown below: Description Three one-hour exams Final Exam Blackboard Exams Research Paper Weekly Quizzes Article Summaries Participation TOTAL Percentage 30% 10% 15% 15% 10% 14% 6% 100% Points 300 100 150 150 100 140 60 1000 Comments 100 points each, taken during class Comprehensive 50 points each, taken online Topic in Cellular/Molecular Biology From the previous 1-2 weeks material, 10 points each Research article reviews, 20 points each Class participation (2 points per day) Letter grade assignment: A>90%; B+>85%; B>80%; C+>75%; C>65%; D+>55%; D>50%; F<50%. You will be expected to endorse the USCA HONOR PLEDGE on every assignment: 'On my honor as a University of South Carolina Aiken student, I have neither given nor received any unauthorized aid on this assignment/examination. To the best of my knowledge, I am not in violation of academic honesty'. TENTATIVE LECTURE SCHEDULE DATE Aug 20 Aug 21 Aug 25 Aug 27 Aug 28 Sep 1 Sep 3 Sep 4 Sep 8 Sep10 Sep 15 Sep 17 Sep 22 Sep 24 Sep 29 Oct 1 Oct 6 Oct 8 Oct 13 Oct 15 Oct 20 Oct 22 Oct 27 Oct 29 Nov 3 Nov 5 Nov 10 Nov 12 Nov 17 Nov 19 Nov 24 Nov 26 Dec 1 Dec 3 Dec 8 WEEK 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 TOPIC The Composition of Cells Blackboard Exam: An Overview of Cells and Cellular Research The Composition of Cells The Composition of Cells Blackboard Exam: Cell Metabolism The Organization and Sequences of Cellular Genomes The Organization and Sequences of Cellular Genomes Blackboard Exam: Fundamentals of Molecular Biology Replication, Maintenance, and Rearrangements of Genomic DNA Replication, Maintenance, and Rearrangements of Genomic DNA Replication, Maintenance, and Rearrangements of Genomic DNA Exam I Replication, Maintenance, and Rearrangements of Genomic DNA RNA Synthesis and Processing RNA Synthesis and Processing RNA Synthesis and Processing Protein, Synthesis, Processing, and Regulation Exam II Protein Synthesis, Processing, and Regulation Protein Synthesis, Processing, and Regulation Protein Synthesis, Processing, and Regulation Fall Break (Oct 22-23) – No Classes Protein Sorting and Transport Protein Sorting and Transport Protein Sorting and Transport The Plasma Membrane The Plasma Membrane Exam III The Plasma Membrane Cell Signaling Cell Signaling Thanksgiving Holiday (Nov 25-37) – No Classes Cell Signaling Cell Signaling FINAL EXAM; 8 AM -2- CHAPTERS 2 1 (open book) 2 2 3 (open book) 5 5 4 (open book) 2-5 6 6 6 6 7 7 7 6-7 8 8 8 8 10 10 10 13 8-10 13 13 15 15 15 15 Comprehensive