Molecular Genetics BSCI410 Review for 3rd exam, Lectures 13-17 The third exam will be Tues., Nov. 29, 2007 ------------------------------------------------------------------------------------------------------------Study material. This study guide covers material for the third exam: Transcription, post-transcriptional gene expression, gene mapping, positional cloning, LOD scores, complex traits and types of allele. This material was given in lectures Oct. 23 through Nov. 8. See the syllabus for readings. Be able to define, discuss, and explain the following concepts: promoter transcription factor epigenetics DNase hypersensitivity mediator heterochromatin dosage compensation Xist RNA macronucleus polyadenylation signal U1 snRNP pan editing exportins eIF4 NMD RNAi miRNA FISH informative meioses haplotype complex traits QTL mapping null allelic series antimorph enhancer maternal effect genes nucleosomes locus control region DNA hemimethylase euchromatin X-inactivation roX RNA micronucleus polyadenylation site U2 snRNP Ran GTPase IRES aminoacyl tRNA exosome dicer siRNA STS LOD scores allelic association phenocopy transmission disequilibrium test amorph hypomorph neomorph core promoter gap genes DNase sensitivity core histones de novo methylation position effect variegation Barr bodies imprinting RNA polymerase IV spliceosome RNA editing importins eIF2 peptidyl tRNA EJC RISC ubiquitin radiation hybrid mapping autozygosity linkage disequilibrium penetrance sib pair analysis haploinsufficient hypermorph Know features associated with active and inactive chromatin. Be familiar with sex determination in Drosophila melanogaster. Be able to explain the A, P and E sites of the ribosome. Be able to summarize the key differences between prokaryotic and eukaryotic translation. Be able to distinguish linkage maps, physical maps and cytological maps and know methods that allow each type of map to be correlated with the others. Be able to look at a pedigree and identify recombinants and nonrecombinants, alleles identical by descent and informative vs. uninformative meioses. Be able to describe or recognize pedigrees showing maternal imprinting, paternal imprinting and anticipation. Be familiar with the definition of a LOD score and how it might change with different models. ------------1