In this lesson we • examine the use of DNA technology in forensics, medicine, and agriculture (SB2f) Terms and topics related to DNA Technology: – – – – – – – Biotechnology cloning DNA fingerprinting genetic engineering Human Genome Project plasmid recombinant DNA What is biotechnology? • The use of living organisms to do practical tasks. • Early examples: – The use of microorganisms to make cheese and wine – Selective breeding of livestock and crops – Production of antibiotics from microorganisms – Production of monoclonal antibodies Goal of biotechnology today: • To find practical applications of DNA tecniques for the improvement of human health and food production – Making gene products using Genetic Engineering – Uses in basic research – Medical uses. Diagnosis of disease – Making vaccines and other pharmaceutical products – Forensic uses of DNA such as DNA fingerprinting – Agricultural uses such as making transgenic plants DNA Technology • What we can do with DNA and what it can do for us DNA TECHNOLOGY DNA recombination or genetic engineering is the direct manipulation of genes for practical purposes Recombinant DNA technology • Refers to the set of techniques for combining genes from different sources in vitro( in a test tube) and transfering this DNA into a cell so it can be expressed. • These techniques were first developed around 1975 and resulted in the appearance of the Biotechnology industry The tools of recombinant DNA • • • • Plasmids Restriction enzymes Gel electrophoresis PCR ( polymerase chain reaction) – Researchers can insert desired genes into plasmids, creating recombinant DNA • And insert those plasmids into bacteria Bacterium Cell containing gene of interest 1 Plasmid isolated 2 DNA isolated 3 Gene inserted into plasmid Plasmid Bacterial chromosome Recombinant DNA (plasmid) DNA Gene of 4 Plasmid put into interest bacterial cell Recombinant bacterium 5 Cell multiplies with gene of interest Copies of gene Gene for pest resistance inserted into plants Figure 12.1 Copies of protein Clone of cells Gene used to alter bacteria for cleaning up toxic waste Protein used to make snow form at higher temperature Protein used to dissolve blood clots in heart attack therapy Genetic Engineering • DNA from one species is inserted into another species. • Ex. Human Insulin for diabetics is now made by bacteria cells! •Therapeutic hormones – In 1982, humulin, human insulin produced by bacteria • Became the first recombinant drug approved by the Food and Drug Administration Figure 12.7A Restriction enzymes cut DNA at specific sequences in the DNA Restriction enzymes = scissors Recombinant DNA Two pieces of DNA cut with the same restriction enzyme will be able to re-combine with each other. Plants • 1) Examples of transgenic plants with resistance to viruses… potatoes, tomatoes, tobacco • 2) Examples of transgenic plants with resistance to insects… corn, cotton • 3) resistance to herbicides • 4) slow down spoilage in tomatoes • 5) Extreme example – strawberries that are resistant to drought, salt, insects, viruses, cold and frost, and improved taste Animals • Bacteria now produce all of the following… – Human growth hormone (HGH) – – Human insulin (replaced cow and pig insulin for human therapy ) – Follicle-stimulating hormone – Factor VIII (replaced clotting factors taken from human blood.) Electrophoresis • • • • • • Separation of charged molecules in an electric field. Nucleic acids have 1 charged phosphate (- charge) per nucleotide. Separation based (mostly) on length: longer molecules move slower. Done in agarose gel matrix to stabilize. average run: 100 Volts across a 10 cm gel, run for 2 hours. Stain with ethidium bromide: bonds between DNA bases and fluoresces orange. Run alongside standards of known sizes to get lengths Gel electrophoresis sorts DNA molecules by size Mixture of DNA molecules of different sizes – – Longer molecules Power source Gel + Shorter molecules + Figure 12.10 Completed gel – After digestion by restriction enzymes • The fragments are run through a gel 1 – 2 Longer fragments z x w Shorter fragments Figure 12.11B + y y Crime • Forensic science is the use of scientific knowledge in legal situations. • The DNA profile of each individual is highly specific. • The chances of two people having exactly the same DNA profile is 30,000 million to 1 (except for identical twins). •DNA and Crime Scene Investigations – Many violent crimes go unsolved • For lack of enough evidence – If biological fluids are left at a crime scene • DNA can be isolated from them – DNA fingerprinting is a set of laboratory procedures • • That determines with near certainty whether two samples of DNA are from the same individual That has provided a powerful tool for crime scene investigators Investigator at one of the crime scenes (above), Narborough, England (left) DNA Fingerprinting 1st-The DNA molecule is cut with restriction enzymes 2nd- we have to separate the fragments This is done by a technique called gel electrophoresis The DNA is placed on a tray filled with gel through which an electric current runs causing the fragments to move through the gel. The segments separate by how far they move in the gel according to size. The DNA will form bands corresponding to the bases (and no two people have the same sequence of bases) in the gel which are unique for each individual. This is DNA fingerprinting Example • A violent murder occurred. • The forensics team retrieved a blood sample from the crime scene. • They prepared DNA profiles of the blood sample, the victim and a suspect as follows: Does suspect DNA bands match DNA from the crime scene? Suspects Profile Blood sample from crime scene Victims profile – DNA fingerprinting can help solve crimes Defendant’s blood Blood from defendant’s clothes Figure 12.12A Victim’s blood Figure 12.12B DNA Fingerprinting Gel Electrophoresis separates pieces of DNA based on size (after being cut up with restriction enzymes) Different people will have different banding patterns. Related individuals will have similar patterns. Solving Medical Problems DNA profiles can be used to determine whether a particular person is the parent of a child. A childs paternity (father) and maternity(mother) can be determined. This information can be used in • Paternity suits • Inheritance cases • Immigration cases Example: A Paternity Test • By comparing the DNA profile of a mother and her child it is possible to identify DNA fragments in the child which are absent from the mother and must therefore have been inherited from the biological father. Does this man’s DNA match the DNA of the child? Mother Child Man Cloning organisms • A body cell from one organism and an egg cell from another are fused • The resulting cell divides like a normal embryo 29 Cloning • Clone- a member of a group of genetically identical cells • May be produced by asexual reproduction (mitosis) 30 What is cloning? • Reproductive cloning – Making an exact copy of a pre-existing or currently existing organism. • Therapeutic cloning – Embryos are grown and stem cells from the embryo are harvested to be used in research to develop treatment for cancer, Alzheimer’s, etc. – Very controversial b/c it kills the embryo in the process. Human Genome Project • Started 1988, finished 2001, the entire sequence of bases in human DNA is now known. • This multi-national effort has led to increased knowledge of … – – – – – Human genetic diseases Gene therapies Evolutionary relationships Cellular functions Cancer genes Gene Libraries • Human genes (and other genes of interest) can be stored inside bacteria cells and viruses which can be saved and grown for use in research. • This may also preserve the genes of endangered or extinct species. Review and Summarize • -use of DNA technology in forensics, medicine, and agriculture (SB2f) Terms and topics related to DNA Technology: – – – – – – – biotechnology Cloning DNA fingerprinting genetic engineering Human Genome Project plasmid recombinant DNA