Dispatch 1) Welcome to Second Semester Take out Feb calendar and figure out how many assignments are required this month. Come up with a plan of attack for each assignment 2) 3) 4) Look at your goal for this class. What do you need to do to reach your goal? AP Biology exam is Monday, May 14. Write that somewhere in your notebook Write 5 things you learned from the reading that is due today (chapters 14-17) 5) Pick up your final exam. Which are your strong/weak areas? Correct at least 5 incorrect questions • • • • • Second Semester is different Shorter—done after May 14th (if you have no missing assignments) Reviews—after school (Mon) or nutrition/lunch (Tues). Review quizzes every Friday Need Review book Less labs—4 of them Any missing assignments have to be done before attending senior activities/AP activities How to be successful #1 Get organized and use TIME EFFECTIVELY #2 Do the reading #3 Ask questions #4 Form study groups #5 Do all assignments including review assignments #6 Look over notes and powerpoints #7 Take notes in review book and make flascards #8 Sleep and eat enough #9 Come to office hours to retake quizzes and FRQs (learn from past mistakes) #10 Have confidence and a positive attitude Chapter 14-Mendelelian Genetics copyright cmassengale 4 Gregor Johann Mendel (1822-1884) Austrian monk Studied the inheritance of traits in pea plants Developed the laws of inheritance Mendel's work was not recognized until the turn of the 20th century copyright cmassengale 5 Gregor Johann Mendel Between 1856 and 1863, Mendel cultivated and tested some 28,000 pea plants He found that the plants' offspring retained traits of the parents Called the “Father of Genetics" copyright cmassengale 6 Particulate Inheritance Mendel stated that physical traits are inherited as “particles” Mendel did not know that the “particles” were actually Chromosomes & DNA ____ + ____ didn’t know about DNA copyright cmassengale 7 Genetic Terminology Trait - any characteristic that can be passed from parent to offspring Heredity - passing of traits from parent to offspring Genetics - study of heredity copyright cmassengale 8 Types of Genetic Crosses Monohybrid cross - cross involving a single trait e.g. flower color Dihybrid cross - cross involving two traits e.g. flower color & plant height copyright cmassengale 9 Punnett Square Used to help solve genetics problems copyright cmassengale 10 copyright cmassengale 12 Designer “Genes” Alleles - two forms of a gene (dominant & recessive) Dominant - stronger of two genes expressed in the hybrid; represented by a capital letter (R) Recessive - gene that shows up less often in a cross; represented by a lowercase letter (r) copyright cmassengale 13 More Terminology Genotype - gene combination for a trait (e.g. RR, Rr, rr) Phenotype - the physical feature resulting from a genotype (e.g. red, white) copyright cmassengale 14 Genotypes Homozygous genotype - gene combination involving 2 dominant or 2 recessive genes (e.g. RR or rr); also called pure Heterozygous genotype - gene combination of one dominant & one recessive allele (e.g. Rr); also called hybrid copyright cmassengale 15 Mendel’s Pea Plant Experiments copyright cmassengale 16 Why peas, Pisum sativum? Can be grown in a small area Produce lots of offspring Produce pure plants when allowed to self-pollinate several generations Can be artificially cross-pollinated copyright cmassengale 17 Reproduction in Flowering Plants Pollen contains sperm Produced by the stamen Ovary contains eggs Found inside the flower Pollen carries sperm to the eggs for fertilization Self-fertilization can occur in the same flower Cross-fertilization can occur between flowers copyright cmassengale 18 Mendel’s Experimental Methods Mendel hand-pollinated flowers using a paintbrush He could snip the stamens to prevent self-pollination Covered each flower with a cloth bag He traced traits through the several generations copyright cmassengale 19 How Mendel Began Mendel produced pure strains by allowing the plants to selfpollinate for several generations copyright cmassengale 20 When he mated a round and a wrinkle pea plant he always got all round in the first generation and 3 times more round than wrinkled in the second generation. Why? Show work Eight Pea Plant Traits Seed shape --- Round (R) or Wrinkled (r) Seed Color ---- Yellow (Y) or Green (y) Pod Shape --- Smooth (S) or wrinkled (s) Pod Color --- Green (G) or Yellow (g) Seed Coat Color ---Gray (G) or White (g) Flower position---Axial (A) or Terminal (a) Plant Height --- Tall (T) or Short (t) Flower color --- Purple (P) or white (p) copyright cmassengale 22 copyright cmassengale 23 copyright cmassengale 24 Mendel’s Experimental Results copyright cmassengale 25 Why did Mendel always get a 3:1 ratio? Did the observed ratio match the theoretical ratio? The theoretical or expected ratio of plants producing round or wrinkled seeds is 3 round :1 wrinkled Mendel’s observed ratio was 2.96:1 The discrepancy is due to statistical error The larger the sample the more nearly the results approximate to the theoretical ratio copyright cmassengale 27 Generation “Gap” Parental P1 Generation = the parental generation in a breeding experiment. F1 generation = the first-generation offspring in a breeding experiment. (1st filial generation) From breeding individuals from the P1 generation F2 generation = the second-generation offspring in a breeding experiment. (2nd filial generation) From breeding individuals from the F1 generation copyright cmassengale 28 Following the Generations Cross 2 Pure Plants TT x tt Results in all Hybrids Tt Cross 2 Hybrids get 3 Tall & 1 Short TT, Tt, tt copyright cmassengale 29 Law of Dominance copyright cmassengale 30 Law of Segregation During the formation of gametes (eggs or sperm), the two alleles responsible for a trait separate from each other. Alleles for a trait are then "recombined" at fertilization, producing the genotype for the traits of the offspring. copyright cmassengale 31 Applying the Law of Segregation copyright cmassengale 32 Law of Independent Assortment Alleles for different traits are distributed to sex cells (& offspring) independently of one another. This law can be illustrated using dihybrid crosses. copyright cmassengale 33 Dihybrid Cross A breeding experiment that tracks the inheritance of two traits. Mendel’s “Law of Independent Assortment” a. Each pair of alleles segregates independently during gamete formation b. Formula: 2n (n = # of heterozygotes) copyright cmassengale 34 Question: How many gametes will be produced for the following allele arrangements? Remember: 2n (n = # of heterozygotes) 1. RrYy 2. AaBbCCDd 3. MmNnOoPPQQRrssTtQq copyright cmassengale 35 Answer: 1. RrYy: 2n = 22 = 4 gametes RY Ry rY ry 2. AaBbCCDd: 2n = 23 = 8 gametes ABCD ABCd AbCD AbCd aBCD aBCd abCD abCD 3. MmNnOoPPQQRrssTtQq: 2n = 26 = 64 gametes copyright cmassengale 36 Dihybrid Cross Traits: Seed shape & Seed color Alleles: R round r wrinkled Y yellow y green RrYy x RrYy RY Ry rY ry RY Ry rY ry All possible gamete combinations copyright cmassengale 37 Dihybrid Cross RY Ry rY ry RY Ry rY ry copyright cmassengale 38 Dihybrid Cross RY RY RRYY Ry RRYy rY RrYY ry RrYy Ry rY ry RRYy RrYY RrYy RRyy RrYy Rryy RrYy rrYY rrYy Rryy rrYy rryy copyright cmassengale Round/Yellow: Round/green: 9 3 wrinkled/Yellow: 3 wrinkled/green: 1 9:3:3:1 phenotypic ratio 39 Dihybrid Cross Round/Yellow: 9 Round/green: 3 wrinkled/Yellow: 3 wrinkled/green: 1 9:3:3:1 copyright cmassengale 40 Test Cross A mating between an individual of unknown genotype and a homozygous recessive individual. Example: bbC__ x bbcc BB = brown eyes Bb = brown eyes bb = blue eyes CC = curly hair Cc = curly hair cc = straight hair bC b___ bc copyright cmassengale 41 Test Cross Possible results: bc bC b___ C bbCc bbCc or bc copyright cmassengale bC b___ c bbCc bbcc 42 Summary of Mendel’s laws LAW DOMINANCE SEGREGATION INDEPENDENT ASSORTMENT PARENT CROSS OFFSPRING TT x tt tall x short 100% Tt tall Tt x Tt tall x tall 75% tall 25% short RrGg x RrGg round & green x round & green 9/16 round seeds & green pods 3/16 round seeds & yellow pods 3/16 wrinkled seeds & green pods 1/16 wrinkled seeds & yellow pods copyright cmassengale 43 Incomplete Dominance and Codominance copyright cmassengale 44 Incomplete Dominance F1 hybrids have an appearance somewhat in between the phenotypes of the two parental varieties. Example: snapdragons (flower) red (RR) x white (rr) r r RR = red flower rr = white flower R R copyright cmassengale 45 Incomplete Dominance r r R Rr Rr R Rr Rr produces the F1 generation All Rr = pink (heterozygous pink) copyright cmassengale 46 Incomplete Dominance copyright cmassengale 47 Codominance Two alleles are expressed (multiple alleles) in heterozygous individuals. Example: blood type 1. 2. 3. 4. type type type type A B AB O = = = = IAIA or IAi IBIB or IBi IAIB ii copyright cmassengale 48 Codominance Problem Example: homozygous male Type B (IBIB) x heterozygous female Type A (IAi) IA i IB IAIB IBi IB IAIB IBi copyright cmassengale 1/2 = IAIB 1/2 = IBi 49 Another Codominance Problem • Example: male Type O (ii) x female type AB (IAIB) IA IB i IAi IBi i IAi IBi copyright cmassengale 1/2 = IAi 1/2 = IBi 50 Codominance Question: If a boy has a blood type O and his sister has blood type AB, what are the genotypes and phenotypes of their parents? boy - type O (ii) AB (IAIB) X copyright cmassengale girl - type 51 Codominance Answer: IA IB i i IAIB ii Parents: genotypes = IAi and IBi phenotypes = A and B copyright cmassengale 52 Sex-linked Punnets Sex-Linked Sex Linked—Page 2 Females are________ Males are__________ NO DISEASES ARE CARRIED ON Y CHROMOSOME Baldness (b) is also a sex-linked trait found on the X chromosome. If a woman is bald mates with a man with no history of baldness in his family, then what percent of the sons will be bald? If fathers have the disease, the daughters are carriers Hemophilia (h) is caused by a recessive, sex-linked gene. If a normal father mates with a carrier mother, what % of sons will have hemophilia? What % of daughters will be carriers? Hemophilia (h) is caused by a recessive, sex-linked gene. If a father with hemophilia mates with a normal mother, what % of sons will have hemophilia? What % of daughters will be carriers? What if both parents are carriers? Q2 Color blindness (c) is caused by a recessive, sex-linked gene. If a father with no colorblindness mates with a mother who is color blind, what % of sons will be color blind? Sex-linked Trait Problem Example: Eye color in fruit flies (red-eyed male) x (white-eyed female) XRY x XrXr Remember: the Y chromosome in males does not carry traits. Xr Xr RR = red eyed Rr = red eyed R X rr = white eyed XY = male Y XX = female copyright cmassengale 63 Sex-linked Trait Solution: Xr XR XR Xr Y Xr Y Xr XR Xr Xr Y 50% red eyed female 50% white eyed male copyright cmassengale 64 Female Carriers copyright cmassengale 65 Pleiotrophy Example: Sickle cell. A mutation in a gene causes multiple symptoms Epistasis In genetics, epistasis is the phenomenon where the effects of one gene are modified by one or several other genes, which are sometimes called modifier genes. Polygenic Inheritance Polygenic inheritance is when a single trait is controlled by 2 or more sets of alleles. Most human traits are polygenically inherited. Examples would be skin and eye color. This explains how you can have several different phenotypes for one trait and how parents can have offspring with eye color or skin color different from what they have. Genetic Practice Problems copyright cmassengale 69 Breed the P1 generation tall (TT) x dwarf (tt) pea plants t t T T copyright cmassengale 70 Solution: tall (TT) vs. dwarf (tt) pea plants t t T Tt Tt produces the F1 generation T Tt Tt All Tt = tall (heterozygous tall) copyright cmassengale 71 Breed the F1 generation tall (Tt) vs. tall (Tt) pea plants T t T t copyright cmassengale 72 Solution: tall (Tt) x tall (Tt) pea plants T t T TT Tt t Tt tt produces the F2 generation 1/4 (25%) = TT 1/2 (50%) = Tt 1/4 (25%) = tt 1:2:1 genotype 3:1 phenotype copyright cmassengale 73 Human Genetic Diseases 1 3 4 2 2006-2007 5 6 Pedigree analysis Pedigree analysis reveals Mendelian patterns in human inheritance data mapped on a family tree = male = female = male w/ trait = female w/ trait Genetic counseling Pedigree can help us understand the past & predict the future Thousands of genetic disorders are inherited as simple recessive traits from benign conditions to deadly diseases albinism cystic fibrosis Tay sachs sickle cell anemia PKU Cystic fibrosis (recessive) Primarily whites of European descent strikes 1 in 2500 births 1 in 25 whites is a carrier (Aa) normal allele codes for a membrane protein that transports Cl- across cell membrane normal lung tissue defective or absent channels limit transport of Cl- & H2O across cell membrane thicker & stickier mucus coats around cells mucus build-up in the pancreas, lungs, digestive tract & causes bacterial infections without treatment children die before 5; with treatment can live past their late 20s Effect on Lungs normal lungs Chloride channel transports salt through protein channel out of cell Osmosis: H2O follows Cl– airway Cl– Cl– channel H2O cells lining lungs cystic fibrosis Cl– H2O bacteria & mucus build up thickened mucus hard to secrete mucus secreting glands delta F508 loss of one amino acid Tay-Sachs (recessive) Primarily Jews of eastern European (Ashkenazi) descent & Cajuns (Louisiana) strikes 1 in 3600 births 100 times greater than incidence among non-Jews non-functional enzyme fails to breakdown lipids in brain cells fats collect in cells destroying their function symptoms begin few months after birth seizures, blindness & degeneration of muscle & mental performance child usually dies before 5yo Sickle cell anemia (recessive) Primarily Africans strikes 1 out of 400 African Americans high frequency caused by substitution of a single amino acid in hemoglobin when oxygen levels are low, sickle-cell hemoglobin crystallizes into long rods deforms red blood cells into sickle shape sickling creates pleiotropic effects = cascade of other symptoms Sickle cell anemia Substitution of one amino acid in polypeptide chain hydrophilic amino acid hydrophobic amino acid Sickle cell phenotype 2 alleles are codominant both normal & mutant hemoglobins are synthesized in heterozygote (Aa) 50% cells sickle; 50% cells normal carriers usually healthy sickle-cell disease triggered under blood oxygen stress exercise Huntington’s chorea (dominant) Dominant inheritance repeated mutation on end of chromosome 4 mutation = CAG repeats glutamine amino acid repeats in protein one of 1st genes to be identified build up of “huntingtin” protein in brain causing cell death Testing… Would you want to know? memory loss muscle tremors, jerky movements “chorea” starts at age 30-50 early death 10-20 years after start 1872 Genetics & culture Why do all cultures have a taboo against incest? laws or cultural taboos forbidding marriages between close relatives are fairly universal Fairly unlikely that 2 unrelated carriers of same rare harmful recessive allele will meet & mate but matings between close relatives increase risk “consanguineous” (same blood) matings individuals who share a recent common ancestor are more likely to carry same recessive alleles Monohybrid Crosses copyright cmassengale 87 P1 Monohybrid Cross Trait: Seed Shape Alleles: R – Round r – Wrinkled Cross: Round seeds x Wrinkled seeds RR x rr r r R Rr Rr R Rr Rr Genotype: Rr Phenotype: Round Genotypic Ratio: All alike Phenotypic Ratio: All alike copyright cmassengale 88 P1 Monohybrid Cross Review Homozygous dominant x Homozygous recessive Offspring all Heterozygous (hybrids) Offspring called F1 generation Genotypic & Phenotypic ratio is ALL ALIKE copyright cmassengale 89 F1 Monohybrid Cross Trait: Seed Shape Alleles: R – Round r – Wrinkled Cross: Round seeds x Round seeds Rr x Rr R r R RR Rr r Rr rr Genotype: RR, Rr, rr Phenotype: Round & wrinkled G.Ratio: 1:2:1 P.Ratio: 3:1 copyright cmassengale 90 F1 Monohybrid Cross Review Heterozygous x heterozygous Offspring: 25% Homozygous dominant RR 50% Heterozygous Rr 25% Homozygous Recessive rr Offspring called F2 generation Genotypic ratio is 1:2:1 Phenotypic Ratio is 3:1 copyright cmassengale 91 What Do the Peas Look Like? copyright cmassengale 92 …And Now the Test Cross Mendel then crossed a pure & a hybrid from his F2 generation This is known as an F2 or test cross There are two possible testcrosses: Homozygous dominant x Hybrid Homozygous recessive x Hybrid copyright cmassengale 93 F2 Monohybrid Cross st (1 ) Trait: Seed Shape Alleles: R – Round r – Wrinkled Cross: Round seeds x Round seeds RR x Rr R r R RR Rr R RR Rr Genotype: RR, Rr Phenotype: Round Genotypic Ratio: 1:1 Phenotypic Ratio: All alike copyright cmassengale 94 F2 Monohybrid Cross (2nd) Trait: Seed Shape Alleles: R – Round r – Wrinkled Cross: Wrinkled seeds x Round seeds rr x Rr R r r Rr Rr r rr rr Genotype: Rr, rr Phenotype: Round & Wrinkled G. Ratio: 1:1 P.Ratio: 1:1 copyright cmassengale 95 F2 Monohybrid Cross Review Homozygous x heterozygous(hybrid) Offspring: 50% Homozygous RR or rr 50% Heterozygous Rr Phenotypic Ratio is 1:1 Called Test Cross because the offspring have SAME genotype as parents copyright cmassengale 96 Practice Your Crosses Work the P1, F1, and both F2 Crosses for each of the other Seven Pea Plant Traits copyright cmassengale 97 Mendel’s Laws copyright cmassengale 98 Results of Monohybrid Crosses Inheritable factors or genes are responsible for all heritable characteristics Phenotype is based on Genotype Each trait is based on two genes, one from the mother and the other from the father True-breeding individuals are homozygous ( both alleles) are the same copyright cmassengale 99 Law of Dominance In a cross of parents that are pure for contrasting traits, only one form of the trait will appear in the next generation. All the offspring will be heterozygous and express only the dominant trait. RR x rr yields all Rr (round seeds) copyright cmassengale 100