“DNA to Protein” Unit Notes Review from 10.1 (pg. 185): DNA Objectives: Explain the principal function of DNA Describe the structure of DNA Define complementary base pairing Explain the role of complementary base pairing in the replication of DNA Summarize the main features of DNA replication “What is a Gene?” Animation DNA codes for genes. What is a gene? About how many genes do humans have? How many of these genes code for making hemoglobin? What is hemoglobin? What can happen if a gene is mutated? Give an example of a mutated hemoglobin gene. What do these red blood cells look like with this mutated gene? “What is a Protein?” Animation What is a protein? Thousands of different proteins that work together to perform the specific job of the cell. Every cell contains… Ex: Bone cells have proteins that function together to make the cell a bone cell! “Anatomy of a Gene” Website The shortest gene in humans is ______ nucleotides and the longest gene is _____ nucleotides. Shortest: Longest: What percent of our genome (all our DNA) is made up of genes? Some of our genome makes noncoding genes which do what? Most of our genome does NOT code for anything at all!!! Why is this part of our genome still important? 10.2 (pg. 190): RNA Objectives: Explain the primary functions of RNA Compare the structure of RNA with that of DNA Describe the structure and function of each type of RNA Summarize the process of transcription DNA is made up of nucleotides consisting of what 3 things? DNA codes for genes that contain the information needed to make what? The genes on the DNA are located where in eukaryotes? What are the building blocks of proteins? Amino acids are found where in the cell? Thus proteins must be made where in the cell? RNA is responsible for… RNA is made up of: What is the full name for RNA? 1. How is RNA different in structure from DNA? 2. 3. **Why do you think RNA can leave the nucleus but DNA can’t? 1. What are the 3 types of RNA? 2, 3. What does mRNA look like and what does it do? What does tRNA look like and what does it do? What does rRNA look like and what does it do? Transcription Promoter RNA Polymerase Termination Signal Steps of Transcription: What is the DNA template? In a eukaryote, how many promoters are there per gene? 1. RNA polymerase binds to the promoter and unwinds the DNA 2. RNA polymerase cuts the hydrogen bonds between the nitrogen bases (A-T, C-G) 3. New nucleotides pair up (A-U, C-G) 4. RNA polymerase bonds the nucleotides together 5. A termination signal is reached and the new RNA strand is released DNA Strand: RNA Strand: ATCGGAAT What gets made in transcription (the products)? After the mRNA gets made, where does it go? “Anatomy of a Gene”Website Exon Intron Humans have on average about how many introns per gene? (Not all genes have introns, though) mRNA splicing What proteins control the cutting out or splicing of introns? Homework: Complete this on a separate sheet of paper in complete sentences. Don’t forget your name! 1. Define transcription and list the main steps involved. Draw and label a picture to help support your definition. 2. List the 3 roles of RNA polymerase in transcription. Compare this to the 3 enzymes you learned about in DNA replication. 3. Create a Venn Diagram comparing and contrasting DNA and RNA. 4. Describe the structure and function of each of the 3 types of RNA. 5. Name the rule that ensures the transcribed RNA molecule is carrying the right message/code. 6. Discuss why it matters which DNA chain in the double helix is used for transcription. 10.3 (pg. 193): Protein Synthesis Objectives: Describe the genetic code Distinguish between a codon and an anticodon, and state where each is found Explain the roles of the start codon and stop codons Summarize the process of translation Protein Synthesis The amount and type of proteins in a cell determine: Proteins are polymers made up of many monomers. What are the monomers or building blocks of proteins? Polypeptides Proteins are also called: Amino acids are joined together by what bonds? How many different amino acids are there? What does the sequence of amino acids determine? How can only 20 amino acids code for thousands of different proteins? Codon Each codon codes for a specific… How many possible codons are there? Start codon Stop codon They can be composed of 1 or more polypeptide chains. Amino acid abbreviation: What does GCU codon represent? Amino Acid name: Amino acid abbreviation: What does CGU represent? What does AUG represent? Translation Where does translation occur in the cytoplasm? What carries amino acids in the cytoplasm to the ribosome? Anticodon Amino Acid name: Amino acid abbreviation: Amino Acid name: Describe the pairing of tRNA anticodon with the mRNA codon. What are ribosomes made up of? What do ribosomes do? 1. What are the 3 binding sites in ribosomes? 2. 3. Transcribe the DNA sequence: TACTATCCGATT Translate the mRNA sequence Steps of Translation More than 1 ribosome can translate a mRNA strand. What is the distance apart of the ribosomes? 1. mRNA leaves the nucleus and goes to the ribosome 2. INITIATION: ribosome subunits and a tRNA join together at the start codon and begin reading the mRNA 3. ELONGATION: mRNA is read in groups of 3 called codons A message is sent to the tRNA to pick up an amino acid and bring it to the ribosome The anticodon on the tRNA matches with the codon on the mRNA and the tRNA drops off the amino acid The next codon moves in and the process is repeated 4. TERMINATION: stop codon is reached and the protein is released; the ribosome complex falls apart Homework: Complete the questions on a separate piece of paper in complete sentences. 1. Compare and contrast transcription and translation in a Venn Diagram. 2. Distinguish a codon from an anticodon. 3. Describe the function of tRNA in translation. 4. Decipher the amino acids that are coded for by the codons AUG, AGU, CCU, and GUG. 5. Explain the significance of the start and stop codons. Do all polypeptides begin with the Methionine (MET) amino acid? 6. Explain what translation of the mRNA transcript UAACAAGGAGCAUCC would produce. Chapter 11: Gene Expression Gene Expression Does every single cell produce every single possible protein? Why or why not? Why is gene expression controlled? Genome Gene Expression in Prokaryotes Prokaryotes do not have a ________ and are singlecelled organisms. Lactose is a double-sugar (disaccharide) made up of which two single-sugar molecules (monosaccharides)? Operon What is the lac operon in E. coli? Structural genes Promoter Operator When were the genes for the enzymes responsible for breaking down lactose expressed (turned on)? Repression In the absence of lactose, what attached to the operator? What did it do to the operon? Activation Inducer When lactose is present in the E. coli cell, what does it do to the repressor protein? How does this affect the operon? By controlling gene expression… E. coli conserves resources and produces only those proteins that are needed Eukaryote Gene Expression Why are eukaryotes more complex than prokaryotes? Why is eukaryote gene expression more complex? Tightly coiled DNA is called heterochromatin. Draw this with tightly coiled DNA around histone proteins. Euchromatin: Draw it: Heterochromatin: How does the degree to which DNA is coiled affect gene expression? How can the pattern of introns and exons code for new protein structures? What is pre-mRNA and what happens to it before translation? Cell differentiation