All things Cells Saron Hadgu Louis Orisakwe Victoria Ramos Tiffany Tran Prokaryotes vs. Eukaryotes Prokaryotes: ● DNA concentrated in nucleoid, which is not membrane enclosed ● no membrane bound organelles Eukaryotes: ● DNA concentrated in membrane enclosed nucleus ● larger volume Prokaryotes & Eukaryotes Similarities ● bound by plasma membrane ● filled with semi-fluid jelly like substance called cytoplasm ● contain chromosomes and DNA ● have ribosomes Animal vs. Plant Eukaryote Cell What animals have and plants don’t Lysosome Chloroplasts Centrioles Cell wall - Flagella(loc. in some plant sperm) What plants have and animals don’t - -Plasmodesmata- Central vacuole and tonoplast Controlling Internal Environment Cell Membrane- selective barrier that allows passage of enough oxygen, nutrients and waste to enter and exit the cell Simple Diffusion- When an area of high concentration moves to an area of lower concentration Facilitated Diffusion- the movement of ions/molecules down its gradient across a biological membrane with the help of a specific protein. Active Transport- Movement of a substance moving against the membrane gradient mediated by a certain kind of transport protein. Hypo/Iso/Hyper ● Membrane proteins-integral: used in transport and as receptors -peripheral: regulates ion channels and receptors Both are used as transport channels or as receptors Cell receptorsglycoproteinhelp with cell to cell recognition Hydrophilic -polar molecules Hydrophobic -nonpolar molecules ...therefore allows small nonpolar substances ● ● ● ● ● List of terms for cells that you need to know Endoplasmic Reticulum: combination of sacs and tubes Rough ERSmooth ER- synthesis of lipids, Nucleus Nuclear envelope-double membrane with pores; located next to ER and enclose nucleus Nucleolus- Multiple organelles that help make ribosomes Chromatin- made of DNA and protein and in a dividing cell, individual chromosomes Plasma membrane- enclose cell(in both plant and animal cells) Cell wall- enclose plant cell, gives shape, protects cell and made of cellulose, protein, and other polysaccharides Ribosomes- Small circular organelles that produce protein( bound to rough ER or nuclear envelope and free in cytoplasm) ● Golgi apparatus- organelle that modifies, sorting, and secretes cell products ● Lysosome- only in animals- hydrolyzes( digests macromolecules) ● Mitochondria- contains a double membrane and ribosome; where cellular respiration happens-ATP generated ● Peroxisome-only in animals- produce hydrogen peroxide through metabolic functions ● Microvilli- increase cell surface area; projection ● Flagellum- made of microtubule and used for movement in some animal cells ● Centrosome- where microtubules are made; spindle in mitosis begins forming at two ends of centriole - Has centrioles in animal cells - Cytoskeleton- provides cell shape and helps with movement - Microfilament, Intermediate Filament, Microtubules ● Plasmodesmata- through cell walls connecting cytoplasm and adjacent cells ● Chloroplast- organelle that converts energy from the sun to chemical energy in sugars-photosynthetic-present in plant cells ● Central vacuole- used for storage, hydrolysis of macromolecules, breakdown of waste; enlarges during plant Protein Production ● ● ● - ● - Nucleus: surrounded by nuclear envelope; envelope connected to ER perforated by nuclear pores function: contains chromosomes contains nucleoli where ribosomal subunits are made pores regulate entry/exit of materials Ribosomes: two subunits made of rRNA and proteins function: protein synthesis ER and vesicles: membrane bound tubules and sacs continuous with the nuclear envelope functions: rough ER aids in synthesis of new proteins Golgi Apparatus: stacks of flattened membranous sacs functions: modification of proteins which are then released by vesicles Energy Production ● ● - mitochondria: bounded by double membrane inner membrane contains cristae functions: cellular respiration chloroplasts: two membranes around fluid stroma contains thylakoids stacked into grana functions: photosynthesis Cell Reproduction ● ● - nucleus and DNA (definition and function reviewed above) centrioles: involved in the development of spindle fibers in cell division Digestion ● lysosomes: - membranous sac of hydrolytic enzymes - function: breakdown of ingested substances, macromolecules, and damaged organelles ● vacuoles: - membrane bound vesicle - functions: digestion, storage, waste disposal, protection Cell Connections ● Connection Junctions -Plasmodesmata- channels that connect cells -Gap Junctions-like plasmodesmata but gap junction pores are not lined with the membrane ● Barrier Junctions -Tight Junctions- establish barriers that prevent leakage of extracellular fluid across layer of epithelial cells -Desmosomes- fasten cells together in strong sheets Cell Division Key terms: CentriolesCentromereKineticoreMicrotubuleIntermediate FilamentsMicrofilaments- Cell Regulation ● G1 and G2- chromosomes have 1 chromatid, prepares for cell division ● S phase- DNA replication ● cdKs- cyclin dependent kinases : a protein kinase that is active when attached to a cyclin ● cyclin- a protein that regulates cell cycle DNA Replication DNA Replication steps: Helicase unwinds the DNA. Single binding protein stabilizes the strands. Leading strand is then synthesized by DNA pol 3 (5 to 3). Primase sets RNA primer DNA pol 3 puts DNA down creating okazaki fragments DNA polymerase 1 removes primer and puts DNA Ligase closes the gaps Cell Communication ● Reception: target cell detects a signal molecule from outside the cell ● Transduction: signal is converted to a form that can induce a cellular response ● Response: specific response to signal molecule Cell Communication cAMP Protein kinase Cell Division G protein Energy Transformation ATP- bonds between phosphates are unstable ADP-ATP energy coupling (exergonic to endergonic reactions) -Phosphorylation can change shape of proteins (conformational change) Enzyme Function Biological catalysts -speed rate of reactions -reduce activation energy Induced fit ( fits like a key) -temporarily bind to substrate Affected by: - temp - ph - salinity and concentration of substrate and enzyme- Free Response- 2011 Form B 1. The cell cycle is fundamental to the reproduction of eukaryotic cells. (a) Describe the phases of the cell cycle. (b) Explain the role of THREE of the following in mitosis or cytokinesis. " Kinetochores " Microtubules " Motor proteins " Actin filaments (c) Describe how the cell cycle is regulated and discuss ONE consequence of abnormal regulation. .(a) Describe the phases of the cell cycle. (6 points maximum) Correct order of cycle phases (1 point for entire correct list) Interphase → Prophase → (Prometaphase) → Metaphase → Anaphase → Telophase → Cytokinesis OR G1 → S → G2 → M Correct description of at least one important structural or molecular characteristic of each phase (1 point each; 5 points maximum) • Interphase (including, if specified, G1, S, G2 subphases, correctly ordered): Chromatin dispersed in nucleus; nuclear envelope and nucleoli are intact and functional; DNA is replicated here. • G1, G2: Cell growth. • S: DNA replication. • Mitosis: Nuclear division. • Prophase: Chromosomes begin to condense from chromatin; spindle apparatus assembled. • (Prometaphase): Nuclear envelope disperses, nucleoli disperse, chromosomes connect to spindle apparatus fibers and begin to show motility. • Metaphase: Chromosomes reach maximum condensation and align on metaphase plate/plane. • Anaphase: Two-chromatid chromosomes split into two daughter (one-chromatid) chromosomes; chromosomes move to opposite poles of the spindle apparatus. • Telophase: Chromosomes disperse back to chromatin form, nuclear envelope reassembles, nucleoli reassemble. • Cytokinesis: If this occurs, it is normally coordinated with telophase; cell division. b) Explain the role of THREE of the following in mitosis or cytokinesis. (3 points maximum) • Kinetochores • Microtubules • Motor proteins • Actin filaments Correct explanation of function (1 point each; if all four are chosen, only the first three are scored) • Kinetochores: Located in centromeres of condensed chromosomes; microtubule attachment sites necessary for chromosome positioning and movement. • Microtubules: Fundamental structural element of the spindle apparatus; framework on which chromosome motility is generated; define axis of division and cytokinesis. • Motor proteins (correct location and function must be specified): In kinetochores, move chromosomes during mitosis, including anaphase separation; involves kinesins and dyneins. OR In animal cell cleavage furrow, generate force to pinch cell in two; involves myosins. • Actin filaments: Assemble under the membrane at the cytokinesis site; interact with myosin motor proteins to generate force to pinch cell in two; also interact with astral microtubules of the spindle to position the spindle apparatus in the cell. (c) Describe how the cell cycle is regulated and discuss ONE consequence of abnormal regulation. (3 points maximum) Regulation: Correct description of checkpoints, which block cell cycle progress unless specific molecular and/or physical conditions are satisfied (1 point each; 2 points maximum) • Action of MPF and CDKs in checkpoint regulation • Contact inhibition of mitosis • Hormones; growth factor control of cell cycle activity Correct discussion of the consequences of abnormal cell cycle regulation (1 point maximum) • Uncontrolled cell proliferation, as in cancer • Apoptosis • Non-disjunction/aneuploidy/broken chromosomes from abnormal spindle events Enzyme Lab 1&2 The purpose of lab 1&2 was to determine the effect ph has on the rate of an enzyme. It was concluded that the specific enzyme thrives more in a neutral environment rather than in an acidic or alkaline environment.