Chapter 21 – Genes Within Populations 1. Genetic Variation is the Raw Material of Evolution a. Darwin: Descent with Modification b. Through time and natural selection, species accumulate differences (adaptations), new species form, different from ancestors c. Microevolution (small changes with gene frequencies of populations) leads to speciation (Macroevolution) 2. Population Genetics a. Study of changes in gene frequencies within a population b. Hardy-Weinberg Principle i. Null hypothesis: when all the following assumptions are met, population is in equilibrium, i.e. not changing, not evolving ii. Ideal conditions that keep genotype proportions constant from generation to generation are 1. Large population size 2. Random mating is occurring 3. No mutation occurs 4. No immigration of genes into population (no migration) (no movement of genes into/out) 5. No selection occurs iii. If all conditions met, Hardy-Weinberg Equilibrium exists! iv. Can this be? No evolution? c. Hardy-Weinberg Equation i. Mathematical explanation and prediction of changes in gene frequencies ii. Terminology 1. Population – geographically localized group of individuals of same species 2. Gene Pool – all alleles in population for a particular trait 3. Gene Frequency - proportion of population with a particular gene/allele 4. Evolution – change in gene frequency in population iii. The Equations 1. p+q = 1 ; p = frequency of A, q = frequency of a a. This equation represents the gene pool for a particular trait in a population 2. p2 + 2pq + q2 = 1 ; p2 = frequency of homozygous dominant, 2pq – frequency of heterozygote, q2 = frequency of homozygous recessives a. This equation represents total genotype frequencies in population. Binomial expansion of (p+q) (p+q) = 1 3. Five Agents of Evolutionary Change a. Mutation i. Ultimate source of variation ii. Random, not adaptive iii. So rare, mutation alone doesn’t change allele frequency much b. c. d. e. iv. If selected for fitness, frequency increases, alternate allele decreases v. If dominant, effect is more immediate Non-Random Mating i. Inbreeding, due to proximity, ex. Self pollinating plants ii. Individual with same genotypes mate produce more homozygotes, less heterozygotes iii. Changes genotype ratios, but maybe not gene frequencies iv. Non-adaptive Gene Flow or Migration i. A very potent agent of change ii. Movement of alleles from one population to another iii. Non-adaptive change iv. May introduce or lose genes or blend gene pools of 2 populations v. Insects/animals can carry pollen great distances vi. Animals join new groups, bring their genes Effect of Small Population i. Genetic Drift – change in gene pool of small population due to chance ii. Non-adaptive iii. Smaller the population, greater chance to deviate from expected outcomes iv. Two causes of Genetic Drift 1. Bottleneck Effect – see fig. 21.6 a. Pop, drastically reduced by natural disaster, weather, earthquake b. Remaining indiv. not representative of original population c. Loss of variability d. Elephant seals hunted 2. Founder Effects a. Small, unrepresentative group migrates from original population b. New population may increase rare allele or the allele may disappear – by chance c. Non-adaptive d. Polydactyly (6 fingers) in Amish population in PA., many oceanic island populations, Galapagos Island populations, Hawaiian Island populations. Selection i. Driving force of evolution – adaptive genetic change ii. Natural selection is the process, evolution is the outcome, the historical record of change over time iii. Three conditions must be met for natural selection to occur 1. Variation occurs within population 2. Variation results in differential reproduction (number of offspring surviving) 3. Variation must be genetically inherited iv. Examples of selection on phenotype variations 1. Selection to avoid predators through coloration – camouflage a. Pocket mice in New Mexico, two different colors, two different environments, lava formation and desert 2. Selection to match climatic conditions a. Frequency of different alleles for enzymes varies with temperature/climate/latitude b. Ex. The frequency of cold-adapted allele for enzyme in a fish decreases with lower latitudes (warmer climates) 3. Selection for pesticide resistance a. In insects, selection for genes that i. Decrease uptake of pesticide or ii. Decrease number of target sites or iii. Enzymes that destroy pesticide 4. Measuring Fitness a. What does survival of the fittest mean? What is fitness? b. Combination of 3 components: i. How long individual survives ii. How often it mates iii. How many offspring it produces per mating c. Water strider body size and egg laying example – see page 442 i. Larger females lay more eggs per day BUT… survive for shorter period of time ii. Therefore intermediate sized females produce most offspring during lifetime, and have HIGHEST fitness 5. Selection Interacts with Other Evolutionary Forces a. Natural Selection and Mutation Rates i. If mutation rate of favorable allele to unfavorable allele is greater than selection, then that allele MAY increase, ii. BUT THIS IS RARE b. Natural Selection and Genetic Drift i. Both can eliminate an allele, BUT selection is adaptive for fitness, genetic drift is random reduction of population size ii. Only in smaller populations, it’s more likely genetic drift will occur c. Natural Selection and Gene Flow i. Gene flow may counter natural selection by introducing unfavorable genes ii. Or it could accelerate adaptiveness by introducing favorable genes iii. Changes in allele frequencies depends on which process is stronger – natural selection or gene flow iv. Wind pollinated plants higher rates of gene flow than sedentary animals. 6. Natural Selection Can Maintain Variation in Population a. Frequency-Dependent Selection i. Negative Frequency Dependent Selection (most common form is selected against) 1. Most common form is preyed upon: “search image” 2. Less frequent forms NOT preyed upon, survived, and increased! 3. Resource competition another cause of negative frequency dependent selection a. If rare genotype that requires different resource than common form, less competition and it will survive better IF all resources equally available b. More competition for common form ii. Positive Frequency-Dependent Selection – see page 444 1. When rare form is more likely to be preyed upon (selected against), favoring the common form, more frequent form b. Oscillating Selection i. Selection favors one phenotype at one time and another phenotype at another time ii. Climate and seed size and beak size of finches 1. In drought, less small seeds, more large seeds 0 favors large billed finches 2. When wet conditions return, small seeds more available, favors small beaked finches iii. Fitness of phenotype depends on environmental conditions, no frequency of phenotype c. Heterozygous Advantage i. Keeps both alleles for gene in population because being heterozygous is an advantage for survival ii. Diploidy keeps recessive alleles in population, maintaining variation iii. Sickle cell anemia gene(s) is in high frequency in Africa 1. A heterozygote individual is favored in malaria infested areas in Africa because they are resistant to malaria AND do not die from sickle cell anemia 2. SC gene is lower in African Americans because not selected for without malaria selection factor 7. Selection Affects Distribution of Polygenic Traits with continuous Variation – handout #437 a. Disruptive Selection i. Increase extreme phenotypes, eliminating intermediate forms ii. Balanced polymorphism iii. Beak sizes and seed sizes, banded snails vs. solid colored snails & camouflage b. Directional Selection i. Elimination of one extreme, favors other extreme ii. Transient polymorphism iii. Peppered moths, drug resistant bacteria, giraffe neck length c. Stabilizing Selection i. Selection against extremes of phenotypes ii. Increases intermediate form or common form iii. Results in uniformity iv. Birth weights, clutch size of eggs 8. Limitations on selection a. Pleiotropy i. Alleles may have multiple effects on other traits ii. Ex: Large clutch sizes of eggs produce thin shells b. Epistasis i. If selection for one gene (enzyme) effect is hindered by another gene required in pathway c. Can’t eliminate variation i. Evolution requires genetic variation