DNA & RNA: BACKGROUND LECTURE October 1 st – October 11 th , 2012 TIMELINE Monday, October 1 st DNA & RNA Lecture, Read Lab 4A Tuesday, October 2 nd DNA & RNA Lecture, Pre-Lab Quiz, Lab 4A (approximately 50 minutes), read Lab 4B Thursday, October 4 th DNA & RNA Lecture, Lab 4B (50 minutes) Monday, October 8 th MAGIC MOUNTAIN! Tuesday, October 9 th Lab 4C, Lab 4A due Thursday, October 11 th Lab 4D, Lab 4B due, Post-Lab Quiz DEOXYRIBOSE NUCLEIC ACID: REVIEW Composed of nucleic acids Antiparallel Structure: Sugar Phosphate Group Nitrogenous Base Adenine Guanine Cytosine Thymine BASE PAIRING Adenine forms a base pair with thymine Cytosine forms a base pair with guanine Thymine and Cytosine Pyrimidine Composed of a single carbon ring Adenine and Guanine Purines Composed of a double carbon ring NITROGENOUS BASES RIBONUCLEIC ACID: REVIEW Composed of nucleotides mRNA Contains genetic information needed to produce proteins tRNA Used to deliver amino acids to the ribosome rRNA Used to link amino acids together to form proteins Structure Nitrogenous base Uracil instead of thymine Ribose sugar Phosphate groups DIFFERENCES BETWEEN DNA AND RNA DNA Double-stranded Contains a deoxyribose sugar Complementary base to adenine is thymine RNA Single-stranded Contains a ribose sugar Complementary base to adenine is uracil SIMILARITIES BETWEEN DNA AND RNA Composed of nucleotides Polar molecules Due to their negatively charged phosphate group Both have hydrogen bonds between the nitrogenous bases Phosphodiester bonds between adjacent sugar and phosphate groups Make up the “backbone” of DNA and RNA Phosphodiester bonds are much stronger than hydrogen bonds Covalent bonds Hydrogen bonds are constantly broken to permit for DNA replication, while phosphodiester bonds are hardly ever broken in natural processes CENTRAL DOGMA OF BIOLOGY DNA RNA Protein CENTRAL DOGMA OF BIOLOGY Transcription Process by which the information contained in a section of DNA is transferred to a newly assembled piece of mRNA (messenger RNA) DNA is “unzipped” by helicase enzyme Read by RNA polymerase CENTRAL DOGMA OF BIOLOGY Translation Process by which mRNA is “read” by the ribosomes and converted into amino acids, or proteins mRNA is read as triplet codons Each codon codes for a specific amino acid Begins with an initiator codon, for example, AUG Ends with the stop codon, for example, UAA or UAG Introns vs. Exons VIDEO: CENTRAL DOGMA OF BIOLOGY http://www.youtube.com/watch?v=9kOGOY7vthk CHARACTERISTICS OF DNA AND RNA Negatively charged phosphate backbones make them polar molecules Hydrophilic Adding salt neutralizes the charge on the phosphate backbone, and makes the DNA or RNA less hydrophilic This causes the DNA or RNA to precipitate out of an aqueous solution Ethanol makes it easier for the sodium (Na+) to interact with the PO3- in the DNA/RNA backbone Foundation of 4A-4D lab series