8.2 Structure of DNA BIOLOGY CHAPTER 8 • FROM DNA TO PROTEINS • SECTION 8.1 ON IDENTIFYING DNA AS THE GENETIC MATERIAL 8.2 Structure of DNA 8.1 Griffith’s Transforming Principle • In 1928, Griffith was a British microbiologist who was studying the bacterium that causes pneumonia (streptococcus pneumoniae) • Two forms of the bacteria exist– smooth (s) and rough (r) • Smooth form is deadly to mice • Killed S did not harm mice • Rough bacteria did not kill the mice 8.2 Structure of DNA Transformation • When injected with a combination of the live Rough and dead Smooth the mice died • Also, live Smooth bacteria were found in the blood of the dead mice. • Conclusion: Somehow the non-lethal Rough bacteria had TRANSFORMED into deadly Smooth bacteria. • Genetic material from S had gotten into R and transformed it into S 8.2 Structure of DNA Oswald Avery • In 1944, Another scientist named Oswald Avery devised a clever experiment with chemical analysis • Avery’s chemical analysis showed that the transforming agent was probably genetic material not protein • Scientists were still skeptical 8.2 Structure of DNA Hershey and Chase confirm DNA as the genetic material • A bacteriophage (also called a phage) is a virus that attacks bacteria by injecting its genetic material (DNA) into the bacteria • It is DNA surrounded by a protein coat • In 1952, Hershey & Chase used phages & radioactive isotopes which only show up in DNA to successfully support their hypothesis 8.2 Structure of DNA Additional History • In the 1950s, Rosalind Franklin (1920-1958), was a British scientist who was doing X-ray diffraction studies on DNA • Her coworker Maurice Wilkins showed her work to two other DNA American researchers without her permission • Those two – Watson and Cricks – took her work and figured out the structure of DNA – a double helix • The three of them got the Nobel Prize and Franklin, who had died in 1957, was not even mentioned 8.2 Structure of DNA What makes up a nucleotide? • Based on this history, the make up of a nucleotide (the monomer for nucleic acids) became known to have : • 1. A Phosphate group (PO4) • 2. A ring-shaped, 5 carbon sugar called deoxyribose (remember – anything ending in “ose” is a sugar) • 3. A nitrogenous base consisting of a single or double ring built around C and N atoms 8.2 Structure of DNA • • • • • Chargaff’s Rule The four nitrogenous bases in DNA are: - THYMINE (T) - ADENINE (A) - GUANINE (G) - CYTOSINE (C) • CHARGAFF’S RULE of BASE PAIRING states that Adenine always pairs with Thymine; and Guanine always pairs with Cytosine • A-T and C-G 8.2 Structure of DNA KEY CONCEPT DNA structure is the same in all organisms. 8.2 Structure of DNA DNA = Deoxyribonucleic Acid • DNA is made up of a long chain of nucleotides. • Each nucleotide has three parts. 1. 5-carbon sugar called deoxyribose 2. Phosphate group 3. Nitrogen base phosphate group nitrogen-containing base One Nucleotide deoxyribose (sugar) 8.2 Structure of DNA • There are only four Nitrogen bases: 8.2 Structure of DNA Nucleotides always pair the same way. • Nitrogen bases always pair up in DNA like this: A G T C • A pyrimidine (single ring) pairs with a purine (double ring) so the helix has a uniform width. G C A T 8.2 Structure of DNA • The sides are connected by strong covalent bonds. • The N-bases are connected by weak hydrogen bonds. Hydrogen bonds Sugar to phosphate bonds 8.2 Structure of DNA Watson and Crick determined the structure of DNA by building models. • They realized that DNA is a double helix. 8.2 Structure of DNA 8.3 KEY CONCEPT DNA replication makes an exact copy of DNA. 8.2 Structure of DNA DNA Replication: • Why? – So each cell at the end of mitosis will have the exact same DNA • When? – In interphase (S period) • Where? – In the nucleus 8.2 Structure of DNA How Replication occurs: 1. An enzyme “unzips” the DNA by breaking weak hydrogen bonds between Nitrogen bases nucleotide The DNA molecule unzips in both directions. 8.2 Structure of DNA 2. Free-floating nucleotides bond to each side of the DNA strands. 3. Enzymes form covalent bonds in the new strands. new strand nucleotide DNA polymerase 8.2 Structure of DNA 4. Other enzymes “proofread” the new DNA and make necessary repairs (errors are limited to approximately one error per 1 billion nucleotides) 8.2 Structure of DNA 8.4 KEY CONCEPT Transcription is the process of converting the DNA’s code for one gene into an RNA strand. 8.2 Structure of DNA DNA has the code but RNA carries DNA’s instructions to the ribosomes • DNA must remain “safe” in the nucleus while RNA can leave to carry the gene’s code to the ribosome 8.2 Structure of DNA RNA: Ribonucleic Acid • RNA differs from DNA in three major ways. (1) RNA is a single-stranded molecule. (2) RNA has a ribose sugar as its 5-carbon sugar (3) RNA has uracil instead of thymine. 8.2 Structure of DNA Transcription copies DNA’s code to make a strand of RNA • Why? – Make an expendable copy to send out of the nucleus – DNA can stay safe in nucleus • When? – At the start of Protein Synthesis • Where? – In the nucleus 8.2 Structure of DNA How? (1) An enzyme recognizes the start of a gene and “unzips” the weak hydrogen bonds in DNA. start site transcription complex nucleotides 8.2 Structure of DNA (2) Free-floating RNA nucleotides attach to the left strand of the DNA, forming hydrogen bonds. DNA RNA polymerase moves along the DNA 8.2 Structure of DNA (3) Covalent bonds are created. (4) RNA pulls away from the DNA and the DNA strands “zip” back up. RNA 8.2 Structure of DNA 8.51KEY CONCEPT Protein Synthesis is the process of assembling amino acids to make proteins. 8.2 Structure of DNA Codons • Each codon represents one amino acid. Segment of DNA: codon for methionine (Met) codon for leucine (Leu) 8.2 Structure of DNA DNA carries the “code of life” • The code is carried by the order of the N bases – 3 DNA N-bases is called a triplet • Transcription converts these triplets into codons on the mRNA • Translation converts mRNA codons into a string of amino acids using tRNAs. 8.2 Structure of DNA See page 244 in your textbook: Methionine is the only start code There are 3 stop codons All living things have the same codons/amino acids. The genetic code matches each RNA codon with its amino acid or function. 8.2 Structure of DNA Protein Synthesis (1) Transcription DNA makes mRNA which carries the code for one protein. (2) mRNA leaves the nucleus and goes to the ribosome (3) Translation tRNA “translates” the code on the mRNA by bringing the correct amino acid to the right spot on the mRNA. 8.2 Structure of DNA tRNA’s carry only 1 type of amino acid • An anticodon is a set of three nucleotides on a tRNA that is complementary to an mRNA codon. 8.2 Structure of DNA • tRNA bonds to a start codon and signals the ribosome to assemble. • tRNAs bring amino acids to the mRNA and drop them off 8.2 Structure of DNA – tRNAs leave to find other amino acids. – tRNAs continue to drop off amino acids until they reach the stop codon; then the ribosome releases the protein. 8.2 Structure of DNA 8.52 KEY CONCEPT Protein Synthesis is the process of assembling amino acids to make proteins. 8.2 Structure of DNA Protein Synthesis (1) Transcription – DNA makes mRNA which carries the code for one protein. – mRNA leaves the nucleus and goes to the ribosome. (2) Translation tRNA “translates” the code on the mRNA by bringing the correct amino acid to the right spot on the mRNA. 8.2 Structure of DNA tRNA’s carry only 1 type of amino acid • The 3 nucleotides on a tRNA are complementary to 3 nucleotides on an mRNA. 8.2 Structure of DNA • tRNAs pick up the amino acids they can carry • tRNAs go to the mRNA and drop off amino acids 8.2 Structure of DNA – tRNAs leave to find other amino acids. – tRNAs continue to drop off amino acids until they reach the stop codon – then the protein is released to do its job