HDAC Inhibition of SelSA Compounds

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Katherine Tai

Mentor: Mohaiza Dashwood

Advisor: Rod Dashwood

Department of Environmental & Molecular Toxicology

Linus Pauling Institute

 To determine the anticancer effects of compounds SelSA-1 and SelSA-2 in cancer cells HCT 116 (colon cancer) and A431 (skin cancer) in vitro.

http://missinglink.ucsf.edu/lm/genes_and_genomes/acetylation.html

 Acetylated histones are usually associated with transcriptionally active chromatin

 Histones are acetylated by Histone

Acetyltransferases (HATs)

 Deacetylated histones are usually associated with inactive chromatin

 Histones are deacetylated by Histone

Deacetylases (HDACs)

4 classes of HDACs:

• Class I: HDAC1, 2, 3, 8

• Class II: HDAC4, 5, 6, 7, 9, 10

• Class III: Sir2(yeast), SirT1, 2, 3, 4, 5, 6, 7

• Class IV: HDAC11

 Histone Deacetylase (HDAC) inhibition has been shown to elicit anticancer effects in several tumor cells by inhibition of cell growth (Desai et al, 2009)

 HDAC inhibitors can induce p21 (WAF1) expression, a regulator of p53's tumor suppressor activity. (Richon etal, 2000)

 HDAC inhibitors are currently used for anti-cancer chemotherapy (Desai et al, 2009)

Hydroxamic Acids

Short-Chain Fatty Acids

Cyclic Tetrapeptides/epoxides

Aminobenzamides

Electrophilic ketones

Vorinostat or suberoylanilide hydroxamic acid (SAHA) is a member of a larger class of compounds that inhibit histone deacetylases (HDAC).

• Histone deacetylase inhibitors (HDI) have a broad spectrum of epigenetic activities.

• Vorinostat is marketed under the name Zolinza for the treatment of cutaneous T cell lymphoma (CTCL) when the disease persists, gets worse, or comes back during or after treatment with other medicines. (Merck & Co., 2006)

O

H

N

NH

OH

O

 Organoselenium compounds have been shown to be HDAC inhibitors and reduce growth of colon and prostate cancer cells (Nian et al, 2009)

 Two selenium analogs of SAHA have been reported as potent HDAC inhibitors (Desai et al, 2009)

O

H

N

O

SAHA

H

N

O

NH

OH

Se Se

Selenium Dimer

(SelSA-1)

O

H

N

SeCN

O

Selenocyanide (SelSA-2)

H

N

 Test SAHA derivatives SelSA-1 and SelSA-2 for their anti-cancer activity on cancer cell lines in vitro:

 HCT116 (colon carcinoma)

 A431 (skin carcinoma)

 Test SelSA-1 and -2 for their effect on HDAC activity and histone acetylation.

 Test for cellular effects i.e. morphology, growth, cell cycle and cell death on cancer cells.

 The method requires two steps, both performed on the same microtiter plate.

 First, the HDAC fluorogenic substrate, which comprises an acetylated lysine side chain, is incubated with a sample containing HDAC activity (e.g., HeLa nuclear extract).

 Deacetylation of the substrate sensitizes the substrate, so that, in the second step, treatment with the Lysine Developer produces a fluorophore.

 The fluorophore can be analyzed using a fluorescence plate reader (Ex 360 nm/Em 460 nm).

 A standard curve of deactylated substrate is run in parallel.

HDAC activity in Hela Nuclear extract

1600

1400

1200

1000

800

600

400

200

0

0,2 2 20

Concentration (nM)

200

SAHA

HDAC activity in Hela Nuclear extract

2000

1500

1000

500

0

SELSA-1

0,2 2 20 200

Concentration (nM)

HDAC activity in Hela Nuclear extract

2000

1500

1000

500

0

0,2 2 20

Concentration (nM)

200

SELSA-2

 IC50 concentrations were used.

 Cancer cells were treated with SelSA-1, SelSA-2, and SAHA at 3, 6 and 24 hrs.

 Cells were lysed and lysates collected.

 Protein concentration in lysates was determined by

BCA

 Western blotting of equal amounts of protein was done on 4-12% Tris-Glycine pre-cast gels.

HisH3

(9-10-10)

HisH3

Acetylated

(9-10-10)

HisH3

Acetylated

K9

(9-10-10

HisH4

(9-10-10)

HisH4

Acetylated

(9-10-10)

Relative 1.07 1.10 1.17 1.25 1.30 1.02 1.06 1.30 1.32 1.07 1.28 1.37 1.26 1.00

Densitometry

HisH4

Acetylated

K12

(9-10-10

Relative

Densitometry

0.95 0.80 1.18 1.60 1.58 0.97 1.31 1.54 1.29 1.25 1.45 1.48 1.55 1.00

α-Tubulin

Acetylated

α-Tubulin

β-Actin

(8-9-10)

HDAC1

(8-9-10)

β-Actin

(8-3-10)

HDAC2

(8-3-10)

HDAC8

(8-3-10)

3H 6H 24H

Treatments:

None SelsA-1 SelsA-1 SelsA-2 SelsA-2 SAHA

2.5μM 5μM 2.5μM 5μM 5μM

β-Actin

(9-16-10)

HDAC3

(9-16-10)

3H 6H 24H

β-Actin

(8-3-10)

HDAC10

(8-3-10)

Treatments:

None SelsA-1 SelsA-1 SelsA-2 SelsA-2 SAHA

2.5μM 5μM 2.5μM 5μM 5μM

β-Actin

(8-3-10)

HDAC11

(8-3-10)

3H 6H 24H

Treatments:

None SelsA-1 SelsA-1 SelsA-2 SelsA-2 SAHA

2.5μM 5μM 2.5μM 5μM 5μM

β-Actin

(4-21-10)

HDAC1

(4-21-10)

HDAC2

(4-21-10)

3H

HDAC3

(6-21-10)

HDAC8

(5-25-10)

6H 24H

Treatments:

None SelsA-1 SelsA-1 SelsA-2 SelsA-2 SAHA

1μM 5μM 1μM 5μM 5μM

β-Actin

(5-25-10)

HDAC7

(5-25-10)

β-Actin

(6-21-10)

HDAC10

(6-21-10)

3H 6H 24H

Treatments:

None SelsA-1 SelsA-1 SelsA-2 SelsA-2 SAHA

1μM 5μM 1μM 5μM 5μM

DMSO SAHA

All Compounds tested at 1μM for 72 hours

SELSA-1 SELSA-2

All Compounds tested at 1μM for 72 hours

 Cell Counting Kit-8 is a nonradioactive, sensitive colorimetric assay for the determination of the number of viable cells in cell proliferation and cytotoxicity assays.

Half maximal inhibitory concentration (IC50): the half maximal (50%) inhibitory concentration (IC) of a substance measuring the effectiveness of a compound in inhibiting biological or biochemical function.

CCK8: WST-8 is reduced by dehydrogenases to give a formazan product. The amount of formazan dye generated, which is soluble in the cell culture medium, is proportional to number of living cells.

2,50

2,00

1,50

1,00

0,50

0,00

0,01 0,1 1

Concentration (uM)

10 100

SAHA

SELSA-1

SELSA-2

VEHICLE (DMSO)

Compound IC

SAHA

50

(uM)

0.8

SELSA-1

SELSA-2

0.6

0.9

180

160

140

120

100

80

60

40

20

0

SelsA-1

SelsA-2

SAHA

No Treatment

DMSO (0.1%)

No

T re a tm e n t

0.1

M

0.25

M

0.5

M

1.0

M

2.5

M

5.0

M

Treatment

7.5

M

10

M

DM

S

O

IC50

• SelSA-1: 1.5 μM

• SelSA-2: 1.75 μM

• SAHA: 5 μM

Treatment increases apoptotic sub-G1 phase

SelSA-1 and SelSA-2 inhibit HDAC activity and induce histone acetylation

These compounds were found to be moderately more potent than SAHA in the activity assay

These compounds inhibit cell growth and cause cell death in colon and skin cancer cells

SelSA-1 and SelSA-2 are important SAHA derivatives which need to be further tested in animal models

HHMI Program

Kevin Ahern

Dashwood Lab

Dr. Roderick Dashwood

Mohaiza Dashwood

Praveen Rajendran

Rong Wang

Hui Nian

Pennsylvania State Hershey College of

Medicine

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