Chapter 12 Notes A. First Discoveries 1. Griffith- experiment showed that live uncoated bacteria acquired the ability to make coats from dead coated bacteria. He called the process transformation. Figure 12–2 Griffith’s Experiment Section 12-1 Heat-killed, diseasecausing bacteria (smooth colonies) Disease-causing bacteria (smooth colonies) Dies of pneumonia Go to Section: Harmless bacteria Heat-killed, disease(rough colonies) causing bacteria (smooth colonies) Lives Lives Control (no growth) Live, disease-causing bacteria (smooth colonies) Harmless bacteria (rough colonies) Dies of pneumonia 2. Avery- discovered that DNA is the nucleic acid that stores and transmits the genetic information from one generation to the next. 3. Hershey & Chase- used radioactive labeling to identify DNA. They showed that DNA, not protein, is the genetic material of a bacteriophage (virus). Figure 12–4 Hershey-Chase Experiment Section 12-1 Go to Section: Bacteriophage with phosphorus-32 in DNA Phage infects bacterium Radioactivity inside bacterium Bacteriophage with sulfur-35 in protein coat Phage infects bacterium No radioactivity inside bacterium DNA Structure 1. DNA is composed of subunits called nucleotides. 2. Nucleotides have three parts: a) sugar b) phosphate group c) base a. The sugar is a 5 carbon sugar called deoxyribose. b. There are four kinds of nitrogenous bases- these form the “rungs” of the ladder 1. Adenine 2. Guanine 3. Cytosine 4. Thymine Figure 12–5 DNA Nucleotides Section 12-1 Purines Adenine Guanine Phosphate group Go to Section: Pyrimidines Cytosine Thymine Deoxyribose DNA Structure c. The two larger bases- adenine and guanine are called purines. d. The two smaller bases- cytosine and thymine are called pyrimidines. e. The backbone of the DNA chain is formed by all sugar and phosphates, the bases hook onto the sugar part of the chain 3. Chargaff’s Rule a. A (adenine) always equals (joins) to T (thymine) b. G (guanine) always equals (joins) to C (cytosine) Figure 12–7 Structure of DNA Section 12-1 Nucleotide Hydrogen bonds Sugar-phosphate backbone Key Adenine (A) Thymine (T) Cytosine (C) Guanine (G) Go to Section: DNA RNA 4. Rosalind Franklin Used a technique called X-ray diffraction to determine DNA was helical. 5. Watson and Crick Built a 3 dimensional model of a DNA molecule which was called a double helix 6. DNA is tightly coiled around a protein called histones. The coil then forms your Chromatin. Coiled chromatin forms your chromosomes. Figure 12-10 Chromosome Structure of Eukaryotes Section 12-2 Chromosome Nucleosome DNA double helix Coils Supercoils Histones Go to Section: C. DNA Replication 1. Before a cell divides DNA is copied (replicated) 2. During DNA replication, the DNA molecule separates into 2 strands. Each new strand will hook up with it’s complementary base partner, making 2 new complementary strands. The strands follow Chargaff’s rule on base pairing. 3. The sites where separation and replication occur are called replication forks. 4. The replication is carried out by enzymes that “unzip” the DNA called DNA polymerase. Figure 12–11 DNA Replication Section 12-2 New strand Original strand DNA polymerase Growth DNA polymerase Growth Replication fork Replication fork New strand Go to Section: Original strand Nitrogenous bases DNA DNA Replication • Complementary base pairs form new strands. DNA Concept Map Section 12-3 RNA can be Messenger RNA also called which functions to mRNA Go to Section: Ribosomal RNA Carry instructions also called which functions to rRNA Combine with proteins from to to make up DNA Ribosome Ribosomes Transfer RNA also called which functions to tRNA Bring amino acids to ribosome III. RNA Structure A. RNA Structure 1. Nucleic Acid made of single chains of nucleotides 2. The sugar is called Ribose 3. Base pairs are cytosine & guanine, adenine & Uracil. 4. Uracil replaces the Thymine B. Types of RNA 1. Messenger RNA (mRNA)- carries the instructions to make a particular protein from DNA 2. Ribosomal RNA (rRNA)- makes up the major part of ribososmes 3. Transfer RNA (tRNA)- transfers the amino acids to ribosomes during protein synthesis III. Transcription A. The process of producing mRNA from DNA. 1. RNA polymerase binds to the DNA and separates the strands. 2. RNA polymerase uses one strand of DNA as a template to form a strand of mRNA. 3. RNA polymerase enzymes will only bind to regions of DNA called promoters (it has a specific base sequence). Figure 12–14 Transcription Section 12-3 Adenine (DNA and RNA) Cystosine (DNA and RNA) Guanine(DNA and RNA) Thymine (DNA only) Uracil (RNA only) RNA polymerase DNA RNA Go to Section: B. RNA Editing 1. Intron- intervening sequences that are removed from the mRNA molecules before they become functional. 2. Exons- the remaining portions that are spliced back together to form the final mRNA. IV. Genetic Code A. Three bases long, called codons (Ex. GCA) B. Proteins are made of long chains called polypeptides C. Codons specify a single amino acid that is to be added to the polypeptide D. D. Polypeptides are made by joining the amino acids. Figure 12–17 The Genetic Code Go to Section: V. Translation (Protein synthesis) A. The decoding of an mRNA message into a protein B. Takes place in the ribosomes C. Steps involved: 1. mRNA is transcribed from DNA and released in the cytoplasm 2. Translation begins when mRNA attaches to a ribosome in the cytoplasm at the start codon (AUG) 3. Each transfer RNA as an anticodon whose bases are complementary to a codon on the mRNA. This has an amino acid attached to one end. 4. The ribosome positions the start codon to attract its anticodon, which is part of tRNA and binds them together. 5. Once the first and second codon and anticodon are bound, the ribosome joins the two amino acids and the tRNA breaks away. 6. Chains of amino acids continue to grow until the ribosome reaches a stop codon on the mRNA strand. Then it replaces the chain. Figure 12–18 Translation Section 12-3 Nucleus Messenger RNA Messenger RNA is transcribed in the nucleus. Phenylalanine tRNA The mRNA then enters the cytoplasm and attaches to a ribosome. Translation begins at AUG, the start codon. Each transfer RNA has an anticodon whose bases are complementary to a codon on the mRNA strand. The ribosome positions the start codon to attract its anticodon, which is part of the tRNA that binds methionine. The ribosome also binds the next codon and its anticodon. Ribosome Go to Section: mRNA Transfer RNA Methionine mRNA Lysine Start codon Figure 12–18 Translation (continued) Section 12-3 The Polypeptide “Assembly Line” The ribosome joins the two amino acids— methionine and phenylalanine—and breaks the bond between methionine and its tRNA. The tRNA floats away, allowing the ribosome to bind to another tRNA. The ribosome moves along the mRNA, binding new tRNA molecules and amino acids. Lysine Growing polypeptide chain Ribosome tRNA tRNA mRNA Completing the Polypeptide mRNA Ribosome Go to Section: Translation direction The process continues until the ribosome reaches one of the three stop codons. The result is a growing polypeptide chain. http://www.pbs.org/wgbh/aso/tryit/dna/# Section 12-4 Gene Mutations: Substitution, Insertion, and Deletion Deletion Substitution Go to Section: Insertion Section 12-4 Figure 12–20 Chromosomal Mutations Deletion Duplication Inversion Translocation Go to Section: