AP BIOLOGY REVIEW NOTE: 1)The packet is the best thing to study (and an AP REVIEW BOOK!!) Chemistry of Life The main atoms of life: -hydrogen, carbon, nitrogen, and oxygen -What’s so great about carbon? -H + O2 makes water. Water is essential because: -cohesion, adhesion, capillary action -high heat capacity (it can store a lot of heat!) -Remember: hydrogen bonds gives water it’s ability for almost everything. Hydrogen bonds is one water sticking to another water. -The action of water holding together itself is called polar covalent. More Chemistry of Life pH on a scale from 1-14 Where is it acidic? Basic (alkaline)? Functional Groups Amino= NH2 Carboxyl= COOH Carbonyl= CO (aldehyde or ketone?) Hydroxyl= OH Major Organic Molecules 1. Carbohydrates (monosaccharide= glucose, fructose) (disaccharide= sucrose…held by glycosidic bond) (polysaccharides= storage like starch or structure like cellulose) Remember carbs are a great source of energy! Major Organic Molecules 2. Proteins (amino acids linked together by PEPTIDE bonds) Primary- just the code Secondary- influenced by H+ bonds Tertiary- influenced by R groups Quaternary- influenced by subunits of proteins binding together Major Organic Molecules Lipids 1. Consist of carbon, hydrogen, and oxygen but not the 1:2:1 ratio of carbs. 2. They have glycerol + fatty acids. 3. Lots of H+= saturated. Examples: fats, oils, phospholipids, and STEROIDS Major Organic Molecules Nucleic Acids This includes DNA, RNA, and actually ATP. Remember that DNA is double stranded and more stable than RNA. Remember ATP is an energy molecule involved in energy requiring/making steps. It’s energy can easily be transferred to do cellular work. Prokaryote, Plant Eukaryote, Animal Eukaryote ONLY BACTERIA ARE PROKARYOTES!! Prokaryote= no nucleus, no organelles, cell wall, ribosomes Plant Eukaryote= square, has nucleus + organelles, ribosomes, cell wall, chloroplasts, cell plate during mitosis Animal Eukaryote= circle, has nucleus + organelles, ribosomes, NO cell wall, lysosomes, centrioles, cleaveage furrow during mitosis Junction, Junction…what’s your function? Desomosome= holds adjacent cells together Gap Junction= in animal cells, allows communication between cytoplasm of adjacent cells Tight Junction= tight connection between membranes of cells Plasmodesmata= only in plant cells, it’s basically a gap junction in plant cells If you have these to pick from A) NAD+ B) NADP+ C) Oxygen D) FADH2 E) Cytochrome…could you name their functions? Photosynthesis Light dependent reactions make ATP, NADPH, and O2. They occur in the thylakoids. P680 (photosystem II, makes ATP + NADPH) and P700 (photosystem I, makes ATP only…if this is the only one that goes it’s called CYCLIC) Light independent reaction (Calvin cycle) uses the ATP and NADPH + CO2 to make glucose. Remember rubisco (RuBP) fixes CO2 in the Calvin…unless it’s a C4 plant. Then it’s PEP. Photorespiration= BAD thing, it’s the fact that rubisco fixes O2 and CO2 Plants Bryophytes= early plants like mosses, liverworts, no vascular tissue Anything that has vascular tissue is called a TRACHEOPHYTE. Have seen this used on the AP test* Plants reproduce in an alternation of generations. (What does that mean?) Haploid= gametophyte (when it’s sperm, when it’s an egg) Diploid= sporophyte (when it’s a zygote, when it’s an embryo) Plants Cont. $$Double fertilization just means normal plant fertilization…it makes one embryo and one endosperm$$ Plant Hormones: -Cytokinin -Auxin -Abscisic Acid (ABA -Giberellin -Ethylene Molecular Genetics A) B) C) D) E) F) G) H) I) Replication vs. Transcription vs. Translation…Think about where these are involved! DNA polymerase RNA polymerase DNA ligase Okazaki fragments Restriction Enzyme Reverse Transcriptase Primer Promoter Helicase Frequently Missed Genetic Words Epistasis (example: albinism) Pleiotrophy (example: siamese cat color and cross eyed) Polygenic Inheritance (example: skin) Complete Dominance vs. Incomplete Dominance vs. Multiple Alleles Classification Recall: –K P C O F G S – Remember that it’s from least most specific 6 Kingdoms: -archabacteria -eubacteria -protista -fungi -plantae -animalia The “Favorite” Phylums Expect 1-2 questions related to this out of the 100 multiple choice questions. These are in your AP Review Packet… Porifera (sponges) Cnidaria (jellyfish, sea anemones, corals) Mollusca (snails, octupus, squid) Annelida (segmented worms) Arthropoda (insects, spiders, crustaceans) Echniodermata (star fish, sea urchins) Chordata (animals that have notochord {becomes brain + spinal cord}, gill slits, muscular tail) A word about symmetry… Symmetry is important in the sense that it has to do with lower/higher organisms (milestone) RADIAL symmetry- circular, disk shaped. Simple. Echnioderms + Porifera BILATERAL symmetry- if organism cut in half, they have symmetric halves. More complex. Compartmentalized. A word about animal behavior… Imprinting (geese) vs. Classical Conditioning (dog slobber) vs. Operant Conditioning (shocking mice) Insight (reasoning)- for higher organisms Kinesis vs. Taxis FROM BIO I…Ecology (in eco packet) Four levels of organization: Biosphere- (think BIG)- this is the entire part of the earth where living things live Ecosystem- interaction of living/nonliving things Community- Group of populations interacting in same area Population= group of individuals of same species interbreeding Three Forgotten Biomes (Ecology cont.) Tundra (northernmost regions) Flora (plants) = not much, some trees, grass Fauna (animals) = arctic foxes, snowy owls, reindeer -Taiga (northern forests) Flora=conifers Fauna= caribou, wolves, moose, rabbits Temperate Deciduous Forests Flora= Trees that drop their leaves in winter Fauna= deer, wolves, Eco…the most IMPORTANT (and from the packet) -r strategists (think they breed like cRazy)they live in uncertain environments, breed fast, don’t care for young, short life span, small (example: bacteria, weeds) -k strategists- live in stable environments, long life span, care for young (example: elephant, humans) -Carrying Capacity= the max number of individuals of a species that a habitat can support Reproductive Barriers Leading to Speciation Prezygotic Barriers Postzygotic Barriers 1. Habitat Isolation 2. Temporal Isolation 3. Behavioral Isolation Mating 4. Mechanical Isolation 5. Gametic Isolation Fertilization 6. Reduced Hybrid viability 7. Reduced Hybrid fertility 8. Hybrid breakdown 4% of a sheep population has black wool, 96% white. If black wool is recessive what % of the population is heterozygous? q2=.04 q = √.04= .2 1-q = p 1-.2= .8 So q= .2 p=.8 Substitute in 2pq 2 (.8) (.2) = .32 or 32% 4% of a sheep population has black wool, 96% white. If black wool is recessive what % of the population is heterozygous? What % of the population is homozygous for white wool? Substitute in for p2 .82= .64 = 64% Plants Meristems-generate cells throughout the plants life. – Apical- extend roots and shoots (Primary Growth) – Lateral- add girth (secondary growth) Transport tissues – Xylem-water and minerals – Phloem- carry sugar Phloem is made of: -Sieve tube cells and companion cells Xylem is made of: – Tracheids- long thin – Vessel elements- wider, shorter – Both are dead at functional maturity Movement of water from roots to leaves occurs by – Bulk-Flow- the movement of fluid driven by a pressure difference at opposite ends of a conduit. – The pressure difference is generated at the leaf end by transpirational pull ( lower pressure) at the leaf end. – Water pulled tight against the cell walls in the air spaces of the leaf cause the negative pressure which draws water up xylem. Major Branches of the Animal Kingdom Coelomate Have a true coelom- a body cavity lined with tissue of mesodermal origin Protostomes Mollusks, Annelids and Arthropods -Spiral Cleavage (cell divisions are along a diagonal line) -Determinate (cell fate is established early) Mouth forms from blastopore “Porifera” Sponges Animals Bilateria (bilateral symmetry) Cephalization 3 germ layers Pseudocoelomatea Subkingdom Eumetazoa Rotifer-Coelom not completely lined by mesoderm Radiata-”Cnidarians” Radial Symmetry Acoelomate No cavity between the gut and the body wall. Flatworm “Platyhelminthes” Schizocoelus (solid masses of mesoderm form coelom) Deuterostomes Echinoderms and Chordates -Radial Cleavage (cell divisions line up with the original cell divisions). -Indeterminate (allows for identical twins!) -anus forms from blastophore -Enterocoelous (outpockets of the archenteron form the coelom) Operons In Prokaryotes Region of a chromosome where a set of genes are transcribed at one time. Allows all of the enzymes needed for a pathway to be present at once. Two Types – Inducible are usually off but can be turned on. Like the lac operon.