CHAPTER 15 Gene Regulation REGULATION OF GENE ACTIVITY 1 Outline Prokaryotic Regulation trp Operon lac Operon Eukaryotic Regulation Transcriptional Control Posttranscriptional Control Translational Control Posttranslational Control Genetic Mutations Cancer Gene Regulation 2 Gene Regulation Pg 252 Structural Genes Operon consist of three components Operator -Onesequence to several where genes coding enzymes of a Promoter -DNA activefor repressor metabolic pathway -DNA sequence where RNA polymerase first binds -Translated simultaneously as a block attaches -Short segment of DNA -Long -Short segment segment of of DNA DNA 3 The trp Operon 5 Repressible Operons: The trp Operon Gene Regulation The regulator codes for a repressor If tryptophan (an amino acid) is absent: Repressor is unable to attach to the operator (expression is normally “on”) RNA polymerase binds to the promoter Enzymes for synthesis of tryptophan are produced If tryptophan is present: Combines with repressor as corepressor Repressor becomes functional Blocks synthesis of enzymes and tryptophan 6 Gene Regulation trp Operon Animations Animation #1 Animation #2 7 The lac Operon 8 Inducible Operons: The lac Operon Gene Regulation 9 The regulator codes for a repressor If lactose (a sugar that can be used for food) is absent: Repressor attaches to the operator Expression is normally “off” If lactose is present: It combines with repressor and renders it unable to bind to operator RNA polymerase binds to the promoter The three enzymes necessary for lactose catabolism are produced 10 Action of CAP Gene Regulation 11 Lac Operon Animations Animation #1 Lac Operon Induction & Quiz Gene Regulation 12 Negative vs Positive Control 1. Negative Control - Active repressors shut down activity of an operon 2. Positive Control - when CAP molecule is active, it promotes activity of operon. Use of both positive and negative controls allows cell to fine-tune its control of metabolism. Regulation of Gene14 Expression: Levels of Control in Eukaryotes Five primary levels of control: Nuclear levels -Chromatin Packing -Transcriptional Control -Posttranscriptional Control Cytoplasmic levels -Translational Control -Posttranslational Control Levels of Chromatin Structure 16 Eukaryotic DNA associated with histone proteins Together make up chromatin As seen in the interphase nucleus Figure 15.5c Nucleosomes: 17 The levels of chromatin DNA wound around balls of eightpacking molecules of histone proteins determined by degree of nucleosome Looks like beads on a string coiling Each bead a nucleosome Gene Regulation 18 Chromatin Packing Euchromatin Loosely coiled DNA Transcriptionally active Heterochromatin Tightly packed DNA Transcriptionally inactive 19 X-Inactivation in Mammalian Females Barr Bodies - Animation Females have two X chromosomes, but only one is active Other is tightly packed along its entire length Inactive X chromosome is Barr body Initiation of Transcription Transcription Bind to Always controlled by enhancer present inDNA cell,proteins but most Regions ofto called likely have DNA where transcription be activated factors that factors before they regulate will bind to transcription DNA can also bind 20 Lampbrush Chromosomes These Each chromosomes has are chromosome present inloops maturing many amphibian egg cells extended from its and give evidence axis (white). Many that when mRNA is mRNA transcripts being synthesized, are being made chromosomes most off these DNA likely decondense. loops (red) 22 Processing of mRNA Transcripts Control speed of Excision of mRNA transport introns can vary from nucleus to cytoplasm Splicing of Will affect exons canthe vary number of Determines the transcripts arriving type of mature at rough ER transcript thatthe And therefore leaves amount the of gene nucleus product realized per unit time 24 Gene Regulation 25 Translational Control Translational Control - Determines degree to which mRNA is translated into a protein product Presence of 5′ cap Length of poly-A tail on 3′ end Posttranslational Control - Affects the activity of a protein product Activation Degradation rate Gene Regulation 26 Post-Translational Control •Posttranslational Control begins once a protein has been synthesized Some Proteins are not immediately active after synthesis. -Cleaving and recombining Some proteins are short-lived -Degraded and Destroyed (Proteasomes) Effect of Mutations on Protein Activity Gene Regulation Point Mutations Involve change in a single DNA nucleotide Changes one codon to a different codon Affects on protein vary: -Nonfunctional -Reduced functionality -Unaffected 27 Effect of Mutations on Protein Activity Gene Regulation 28 Frameshift Mutations One or two nucleotides are either inserted or deleted from DNA Protein always rendered nonfunctional Normal : THE CAT ATE THE RAT After deletion: THE ATA TET HER AT After insertion: THE CCA TAT ETH ERA T Point Mutation 29 Androgen Insensitivity •Female Appearance •Male Karyotype •Testes instead of ovaries & uterus in abdominal cavity •Mutation – makes cells unable to respond to male sex hormone. •The androgen receptor is ineffective 30 Gene Regulation Carcinogenesis 31 Development of cancer involves a series of mutations Proto-oncogenes – Stimulate cell cycle Tumor suppressor genes – inhibit cell cycle Mutation in oncogene and tumor suppressor gene: - Stimulates cell cycle uncontrollably - Leads to tumor formation 32 Carcinogenesis Achondroplasia and Xeroderma Pigmentosum 33 Gene Regulation Causes of Mutations Replication Errors 1 in 1,000,000,000 replications DNA polymerase - Proofreads new strands - Generally corrects errors Environmental Mutagens Carcinogens - Mutagens that increase the chances of cancer - Ultraviolet Radiation - Tobacco Smoke 34