Agenda October 19, 2012 (Friday) Venue: 1F, Room 1001, College of Science, NSYSU Section Time Speakers/Topics 14:00-15:00 Registration & Membership for Taiwan Society of Evolution and Computational Biology 15:00-17:00 Next Generation Sequencing (NGS) Workshop: How to Conduct Genomics and Transcriptomics Studies. Chair: Dr. Arthur Chun-Chieh Shih A. 15:00-15:40 Dr. Mei-Yeh Lu: Next Generation Sequencing – Platforms, Data output & Applications (p18) B. 15:40-16:20 Dr. Wen-Lang Fan: De novo Genome Assembly and Genome Re-sequencing (p18) C. 16:20-17:00 Dr. Arthur Chun-Chieh Shih: An Overview of Transcriptome Analysis Using NGS (p19) 17:00-18:00 Chair:Dr. Shu-Miaw Chaw Chair: Dr. Yu-Chung Chiang OP&ON OS Postdoc oral presentation 15 min each (4 speakers) 18:30-21:00 Student oral presentation 15 min each (4 speakers) Dinner banquet (By invitation only) October 20, 2012 (Saturday) Venue: 11F, International Conference Hall, Info-Library Building, NSYSU Section Time Speakers/Topics 08:00-08:40 Registration, Poster setup, Slide collection, and TSECB membership 08:40-09:00 Welcome and Opening Remarks Chair: Dr. Shu-Miaw Chaw NSYSU President Hung-Duen Yang & BRC Director Dr. Wen-Hsiung Li 09:00-09:50 Plenary Lecture I – K1 Chair: Dr. Hon-Tsen Yu Keynote speaker: Dr. Scott V. Edwards (Harvard University, USA) Title: Resolving the Tree of Life through Phylogenomics and the Multispecies Coalescent Model (p16) 09:50-10:40 Lectures I A Chair: Dr. Shen-Horn Yen Invited Lectures I Animal Evolutionary Genomics 10:40-11:10 Lectures I B Chair: Dr. John Wang Developmental Biology 09:50-10:15 Dr. Hon-Tsen Yu (p19) 09:50-10:15 Dr. Trees-Juen Chuang (p20) 10:15-10:40 Dr. Feng-Chi Chen (p20) 10:15-10:40 Dr. Jr-Kai Yu (p21) Group photo, Coffee break, Slide collection 11:10-12:25 Lectures II A Chair: Dr. Trees-Juen Chuang Lectures II B Chair: Dr. Ming-Che Shih Invited Lectures II Functional Genomics Plant Evolutionary Genomics 12:25-14:00 11:10-11:35 Dr. Tien-Hao Chang (p22) 11:10-11:35 Dr. Shao-Lun Liu (p23) 11:35-12:00 Dr. Chun-Chi Liu (p22) 11:35-12:00 Dr. Chun-Lin Su (p23) 12:00-12:25 Dr. Hsueh-Fen Juan (p21) 12:00-12:25 Dr. Shu-Miaw Chaw (p24) Lunch & Poster competition 13:00-14:00 Company presentations I Chair: Dr. Wen-Hsiung Li 13:00-13:30 A Practical Guide to Complete De Novo Assembly of Small Genomes (Yourgene) 13:30-14:00 Application for High Throughput Sequencer of HiSeq2000 in Genome and Transcriptome Analysis (Illumina) 14:00-14:30 Introduction of Taiwan Society of Evolution and Computational Biology (TSECB) 14:30-15:20 Lectures III A Invited Lectures III Chair: Dr. Jr-Kai Yu Evolutionary & Computational Biology Lectures III B Chair: Dr. Feng-Chi Chen Computational Biology 14:30-14:55 Dr. Tzen-Yuh Chiang (p24) 14:30-14:55 Dr. Yao-Ting Huang (p30) 14:55-15:20 Dr. Hsuan-Cheng Huang (p25) 14:55-15:20 Dr. Daryi Wang (p26) 15:20-16:20 Poster competition Company presentations II - Chair: Dr. Mei-Yeh Lu 15:20-15:50 Roche's Sequencing Solutions for Today and Tomorrow (Roche) 15:50-16:20 MiSeq, the Most Accurate and Easiest to Use Personal Benchtop Sequencer (Genetech) 16:20-17:50 Chair: Dr. Hon-Tsen Yu How to Write English Papers – Dr. Wen-Hsiung Li Discussion: Dr. Shu-Miaw Chaw, Dr. Hon-Tsen Yu, & Dr. Wen-Hsiung Li 17:50-18:50 Dinner 19:00-19:50 Plenary Lecture II- K2 Chair: Dr. Ming-Che Shih Keynote speaker: Dr. Shin-Han Shiu (Michigan State University, USA) Title: What is the Significance of Expression in the Intergenic Regions (p16) 19:50-21:00 Dr. Wen-Hsiung Li Students & Postdocs: All Shapes and Colors. Chair: Dr. Ming-Che Shih Open discussion October 21, 2012 (Sunday) Venue 11F: International Conference Hall, Info-Library Building Section Time Speakers/Topics 08:30-09:00 Registration, Slide collection, and TSECB membership 09:00-09:50 Plenary Lecture III- K3 Chair: Dr. Wen-Hsiung Li Keynote speaker: Dr. Takashi Gojobori (National Institute of Genetics, Japan) Title: Big Data Needs Big Ideas: Environmental Metagenomics for Monitoring Dynamic Changes of Marine Microorganism Diversity (p17) 09:50-10:40 Plenary Lecture IV- K4 Chair: Dr. Hsueh-Wen Chang Keynote speaker: Dr. Zenglong Gu (Cornell University, USA) Title: Evolution of Post-transcriptional Gene Regulation (p17) 10:40-10:55 10:55-12:35 Coffee break, Slide collection Lectures IV A Chair: Dr. Daryi Wang Invited Lectures IV 12:35-13:40 Lectures IV B Chair: Dr. Shou-Hsien Li Computational Biology Evolution and Phylogenetics 10:55-11:20 Dr. Hidemi Watanabe (p26) 10:55-11:20 Dr. Tin-Yam Chan (p28) 11:20-11:45 Dr. Huai-Kuang Tsai (p27) 11:20-11:45 Dr. Shen-Horn Yen (p29) 11:45-12:10 Dr. Ben-Yang Liao (p27) 11:45-12:10 Dr. Chung-Ping Lin (p29) 12:10-12:35 Dr. Wei-Sheng Wu (p28) 12:10-12:35 Dr. Shih-Ying Hwang (p30) Lunch, Poster & oral competition award- Chair: Dr. Shu-Miaw Chaw 14:00-15:25 Lectures V A Chair: Dr. Huai-Kuang Tsai Invited Lectures V Computational Biology & oral presentation 14:00-14:25 Evolutionary Biology Dr. Lee-Wei Yang (p31) Chair: Dr. Shih-Ying Hwang 14:25-15:25 ON Lectures V B Chair: Dr. Tin-Yam Chan 14:00-14:25 Dr. Shou-Hsien Li (p31) 14:25-14:50 Dr. John Wang (p32) 14:50-15:15 Dr. Hurng-Yi Wang (p32) Oral presentation (Non-competition) 15min/speaker (4 speakers) 15:30-15:50 Closing Remarks Chair: Dr. Shu-Miaw Chaw