Fermenter design Mahesh Bule Basic Fermenter Design Criteria • Microbiological and biochemical characteristics of the cell system (microbial, mammalian, plant) • Hydrodynamic characteristics of the bioreactor • Mass and heat transfer characteristics of the bioreactor • Kinetics of the cell growth and product formation • Genetic stability characteristics of the cell system • Aseptic equipment design • Control of bioreactor environment (both macro and micro-environment) • Implications of bioreactor design on downstream products separation • Capital and operating costs of the bioreactor • Potential for bioreactor scale-up Requirements of Bioreactors • There is no universal bioreactor. • The general requirements of the bioreactor are as follows: – The design and construction of bioreactors must keep sterility from the start point to end of the process. – Optimal mixing with low, uniform shear. – Adequate mass transfer, oxygen. – Clearly defined flow conditions. – Feeding substrate with prevention of under or overdosing. – Suspension of solids. – Gentle heat transfer. – Compliance with design requirements such as: ability to be sterilized; simple construction; simple measuring, control, regulating techniques; scale-up; flexibility; long term stability; compatibility with up- downstream processes; antifoaming measures. Fermenter Design • The basic points of consideration while designing a fermenter: – Productivity and yield – Fermenter operability and reliability – Product purification – Water management – Energy requirements – Waste treatment • Other few significant things to be taken in account: – Design in features so that process control will be possible over reasonable ranges of process variables. – Operation should be reliable – Operation should be contamination free Fermenter design • To achieve these the fermenter should have: – Heat and oxygen transfer configuration – Sterilization procedures – Foam control – Fast and thorough cleaning system – Proper monitoring and control system • Traditional design is open cylindrical or rectangular vessels made from wood or stone. • Most fermentations are now performed in close system to avoid contamination. • It should be constructed from non-toxic, corrosion-resistant materials. • Small fermentation vessels of a few liters capacity are constructed from glass and/or stainless steel. Fermenter design • Pilot scale and many production vessels are normally made of stainless steel with polished internal surfaces • Very large fermenters are often constructed from mild steel lined with glass or plastic, in order to reduce the cost. • If aseptic operation is required, all associated pipelines transporting air, inoculum and nutrients for the fermentation need to be sterilizable, usually by steam. • Most vessel cleaning operations are now automated using spray jets, and called cleaning in place CIP. And located within the vessel. • Associated pipe work must also be designed to reduce the risk of microbial contamination. There should be no horizontal pipes or unnecessary joints and dead stagnant spaces where material can accumulate; otherwise this may lead to ineffective sterilization. Fermenter design • Normally, fermenters up to 1000 L capacity have an external jacket, and larger vessels have internal coils. • Pressure gauges and safety pressure valves must be incorporated, (required during sterilization and operation). • For transfer of media pumps are used. Centrifugal pumps (generate high shear forces and path for easy contaminations), magnetically coupled, jet and peristaltic pumps. • Alternate methods of liquid transfer are gravity feeding or vessel pressurization. • In fermentations operating at high temperatures or containing volatile compounds, a sterilizable condenser may be required to prevent evaporation loss. • Fermenters are often operated under positive pressure to prevent entry of contaminants. Summary of bioreactor systems Bioreactor design Cell systems used Products Air-lift bioreactors Bacteria, yeast and fungi SCP, Enzymes, Secondary metabolites, Surfactants Fluidized bed bioreactor Immobilized bacteria, yeast Ethanol, Secondary and other fungi, Activated metabolites, Wastewater sludge Interferons, Growth factors, Immobilized (anchored), Blood factors, Monoclonal mammalian cells on solid antibodies, Vaccines, particles Proteases, Hormones Microcarrier bioreactor Surface Tissue Mammalian, tissue growth on solid surface, tissue engineering Interferons, Growth factors, Blood factors, Propagator, Monoclonal antibodies, Vaccines, Proteases, Hormones Summary of bioreactor systems (cont’d) Bioreactor design Cell systems used Products Membrane Bioreactors, Hollow fibers and membranes used, Rotorfermentor Bacteria, yeast Mammalian cells, Plant cells Ethanol, Monoclonal antibodies, Interferons, Growth factors, Medicinal products Modified stirred tank bioreactor Immobilized bacteria, yeast Ethanol, Monoclonal antiand plant cells bodies, Interferons, Growth factors, Immobilized bacteria, yeast Ethanol, Enzymes, and other fungi Medicinal products Modified packed bed bioreactor Tower and loop Bioreactors Bacteria and yeasts Single cell proteins Summary of bioreactor systems (cont’d) Bioreactor design Cell systems used Products Vacuum bioreactors Bacteria, yeast and fungi Ethanol, volatile products Cyclone bioreactor Bacteria, yeast and fungi Photochemical bioreactor Photosynthetic bacteria, Algae, Cyano bacteria, plant cell culture, r-DNA plant cells Commodity products and SCP Interferons, Growth factors, Blood factors, Monoclonal antibodies, Vaccines, Proteases, Hormones Surface Tissue Mammalian, tissue growth on solid surface, tissue engineering SCP, algae, medicinal plant products, monoclonal antibodies, vaccines and interferons Bioreactor configuration 1. Stirred tank bioreactors Mixing method: Mechanical agitation •Baffles are usually used to reduce vortexing • Applications: free and immobilized enzyme reactions •High shear forces may damage cells •Require high energy input Schematic diagram of a tower bioreactor system with multiple impellers and liquid down comer and counter-current air liquid flow Air Feed Perforated plate Downcomer Baffle Impeller Product Air 2. Bubble column bioreactors Mixing method: Gas sparging • Simple design •Good heat and mass transfer •Low energy input Gas-liquid mass transfer coefficients depend largely on bubble diameter and gas holdup. Schematic diagram of a tower bioreactor system with perforated plates and co-current air liquid flow Air exhoust Broth outlet Sampling nozzles Jacket Constant temp. water bath Compressed air Perforated plate Pump Orifice Sparger Air filter Peristaltic pump Medium inlet Flow meter Medium reservior 3. Air lift reactors Mixing method: airlift • Compared to bubble column reactors, in an airlift reactors, there are two liquid steams: up-flowing and downflowing steams. Liquid circulates in an airlift reactor as a result of density difference between riser and downcomer. ICI Deep shaft unit EMLICHHEIM FLOWSHEET CONDENSATE, MAE-UP WATER, AND FLOCCULATING AGENT CLARIFIER WASH WATER SETTLEMENT RECYCLED WATER TANT RECYCLE SLUDGE B SAND DECANTER CENTRIFUGE B FLOATATION SOIL AND SLUDGE DEEP SHAFT AIR COMPRESSOR LAGOON 4. Packed bed bioreactor Packed-bed reactors are used with immobilized or particulate biocatalysts. Medium can be fed either at the top or bottom and forms a continuous liquid phase. Packed bed perfusion bioreactor for mammalian cell culture 5. Trickle-bed bioreactor The trickle-bed reactor is another variation of the packed bed reactors. Liquid is sprayed onto the top of the packing and trickles down through the bed in small rivulets. Trickle bed reactor for treating waste water 6. Fluidized bed reactor When the packed beds are operated in upflow mode, the bed expands at high liquid flow rates due to upward motion of the particles. Internal circulation patterns of fluidized Ca-alginate beads containing immobilized cells of Z. mobilis. All dimensions in cm. Outer draft tube Inner draft tube 1.176 4 Jets 28.40 26.43 21.30 6.895 0.953 2.876 0.1 2.620 4.530 Miscellaneous reactors • Vacuum fermenter • Tray fermenter • Stirred cascade reactor Vacuum Fermenter Chilled water Condenser Level control Vacuum pump Vacuum control Receiving tank (product) Dry ice bath Heating water Fermenter Filter Medium reservoir Rheostat Filter Metering pump Air or O2 Receiving tank (bleed) Tray fermenter Stirred cascade reactor Bioreactor Operation Modes 1. Batch Operation A batch bioreactor is normally equipped with an agitator to mix the reactant, and the pH of the reactant is maintained by employing either buffer solution or a pH controller Change of Cs with time, t •A foam breaker may be installed to disperse foam dCs rmax CS r dt K m CS Batch operation with stirring Cs 0 K m ln Cs 0 Cs rmax t Cs Bioreactor Operation Modes -2. Plug-flow mode In a plug-flow reactor, the substrate enters one end of a cylindrical tube with is packed with immobilized enzyme and the product steam leaves at the other end. An ideal plug-flow reactor can approximate the long tube, packed-bed and hollow fiber or multistaged reactor F, Cs0 t=0 F, Cs V V F Residence time Continuous operation without stirring Cs 0 K m ln Cs 0 Cs rmax t Cs Bioreactor Operation Modes 3. Continuous stirred-tank A continuous stirredtank reactor (CSTR) is an ideal reactor which is based on the assumption that the reactants are well mixed. F, Cs0 F, Cs V Continuous operation with stirring Bioreactor Operation Modes 3. Continuous stirred-tank reactor-Con. Mass balance of substrate: F, Cs0 Input - Output Consumptio n Accumulati on F, Cs V dCs FCs 0 FCs rsV V dt Steady state: dC s 0 dt MichaelisMenten rate: rmax C S r K m CS rmax Cs FCs 0 FCs V 0 K m Cs Bioreactor Operation Modes 3. Continuous stirred-tank reactor-Con. Mass balance of substrate: F, Cs0 F, Cs rmax Cs FCs 0 FCs V 0 K m Cs V rmax Cs F V Cs 0 Cs K m Cs F 1 V rmax Cs Cs K m Cs 0 Cs Aeration and oxygen transfer in bioreactor systems • Bio-oxidation of substrate with molecular oxygen as the final electron acceptor Oxygen transfer in fermentation system GAS FILM GAS-LIQUD INTERFACE O2 O2 AIR BUBBLE CELL-LIQUD INTERFACE INTERNAL CELL RESISTANCE O2 CELL O2 LIQUID FILM Dissolved O2 O2 in liquid phase, nutrients Electron (medium mostly Transport water) System + TCA cycle LIQUID FILM enzymes The oxygen transport path to the microorganism. Generalized path of oxygen from the gas bubble to the microorganism suspended in a liquid is shown. The various regions where a transport resistance may be encountered are as indicated Oxygen transfer • At Steady-state with no O2 accumulation in the liquid phase: • What are the O2 requirements of microorganisms? – We define: QO2 = Respiration rate coefficient for a given microorganism. Oxygen transfer In general: QO2 = f(microbial species and type of cell, age of cell, nutrient conc. in liquid medium, dissolved O2 conc., temperature, pH, etc.) • For a given: 1) type of species of cell 2) age of cell 3) nutrient concentration 4) temperature 5) pH Oxygen transfer and if O2 concentration, CL, is the limiting factor in cell growth, then QO2 is a strong function of dissolved O2 concentration CL (= mg O2/L). The relationship between QO2 and CL is of the Monod type. 1 2 Q O m a x 2 1 0 QO 2 Q 8 O 2 6 Q / 2 O m a x 2 4 2 0 0 K O 2 2 4 C L C R I T . 6 8 1 0 1 2 1 4 1 6 1 8 2 0 O x y g en C O N C .(CL ) Respiration coefficient QO2 as a function of the dissolved oxygen concentration CL. • where: KO2 = O2 conc. at QO2 max/2 CL CRIT. = Critical O2 conc. beyond which O2 is not limiting QO2 = QO2max = constant • At CLCRIT. respiration enzymes of Electron Transport System are saturated with O2. • When O2 conc. is the “limiting substrate” then analogous to the Monod equation: µmax.S µ = ________ (S = substrate conc. (g/L) KS + S µ = 1 dX (h-1) X dt [Ks = S (g/L), at µmax/2] Volumetric mass transfer coefficient kLa and methods of measurement GAS FILM GAS-LIQUD INTERFACE a UNIT LIQUID VOLUME AIR BUBBLE O2 CL O2 TRANSFER C *L kL LIQUID FILM BULK LIQUID PHASE CELLS (CONC. X) OXYGEN (CONC. C ) L Schematic diagram of the mass balance of oxygen transfer in unit liquid volume Mass balance of oxygen in unit liquid volume Mass balance of oxygen in unit liquid volume (cont’d) Mass balance of oxygen in unit liquid volume (cont’d) At all the times CL = constant Mass balance of oxygen in unit liquid volume (cont’d) Mass balance of oxygen in unit liquid volume (cont’d) Methods of measurement of kLa in a bioreactor Chemical methods of kLa measurement The Sulphite Batch Oxidation Method. F, SO 23 In flu e n t M o to r A ir flo w , ra te A ir o u tle t rp m W a te r o u t W a te r in Schematic diagram of a stirred tank batch reactor Chemical Methods of KLa Measurement (Cont’d) ● Liquid Solution = 0.5 M Na2SO3 (Sodium ++ sulphite), with Cu as catalyst. ● Sparge air through the bioreactor vessel at a given volumetric flow rate Q and impeller speed (R.P.M.) ● -2 Make sure that [SO3 ] is in excess (i.e. 0.5 M Na2SO3) Chemical Methods of KLa Measurement (Cont’d) Chemical Methods of KLa Measurement (Cont’d) Chemical Methods of KLa Measurement (Cont’d) Chemical Methods of KLa Measurement (Cont’d) -2 ● The reaction with [SO3 ] is extremely fast. ● As a result, the O2 gas molecules are consumed as soon as they diffuse into the liquid phase. ● Therefore, the D.O. concentration in the liquid phase, CL 0. Chemical Methods of KLa Measurement (Cont’d) Chemical Methods of KLa Measurement (Cont’d) ● Use iodometric titration to measure -2 [SO3 ] as a function of time, t, as the air bubbles pass through the bioreactor vessel at a given R.P.M. Chemical Methods of KLa Measurement (Cont’d) 8 0 7 0 d[SO3-2] SLOPE = ~dt [SO3-2] t 4 6 T I M E , t, (m in ) 8 -2 -2 O ] d [S ]O [S 3 S L OP E = ~ -- 3 dt t 6 0 2 [SO 3 ] 5 0 4 0 3 0 2 0 1 0 0 0 2 Concentration of SO3-2 as a function of oxidation time Chemical Methods of KLa Measurement (Cont’d) In Situ Measurement of KLa, QO2, and CL* During Cell Growth in a Bioreactor Consider a Stirred Tank Bioreactor System, Where Cell Growth takes Place at a Given Set of Conditions: Aeration Agitation pH Temperature Medium Composition In Situ Measurement of KLa, QO2, and CL* During Cell Growth in a Bioreactor (Cont’d) The Bioreactor Vessel is Equipped with: ● The D.O. Probe, Connected to a D.O. Analyzer. ● Chart Recorder: To Measure Signal from D.O. Probe and Measure Online the D.O. Concentration in the liquid phase of the Bioreactor. In Situ Measurement of KLa, QO2, and CL* During Cell Growth in a Bioreactor (Cont’d) ● The D.O. Probe Measures the PyO2 Partial Pressure (PyO2) of dissolved O2 in the liquid phase, which means that it measures HO2CL. Where: HO2 = Henry’s Constant for O2 in Water CL = D.O. Concentration In the Liquid Phase (Mass of O2/L) In Situ Measurement of KLa, QO2, and CL* During Cell Growth in a Bioreactor (Cont’d) 10 15 Alkali pH rpm 11 12 13 5 Acid 6 Water out 2 7 15 1 30 deg. water in DO2 8 9 4 3 14 16 1. Feed 2. Flow meter 3. Ring sparger 4. Impeller 5. Motor 6. Shaft 7. pH probe 8. D.O. probe 9. Baffle 10. To Condenser 11. D.O. meter 12. pH meter 13. Speed controller 14. Water Jacket 15. Thermometer 16. Chart recorder Set up of a Stirred tank Bioreactor with Dissolved Oxygen Probe, pH probe and accessories. In Situ Measurement of KLa, QO2, and CL* During Cell Growth in a Bioreactor (Cont’d) ● Turning air ON and OFF while maintaining the same R.P.M. we can: Record the D.O. Probe Output in the Chart Recorder. From these Data, we can get KLa, QO2, CL* at given in-situ Bioreactor Conditions. In Situ Measurement of KLa, QO2, and CL* During Cell Growth in a Bioreactor (Cont’d) ● The ON-OFF Operation takes 5 min, during which time: Cell Concentration X (g /L) Constant. We make sure that the D.O. Concentration CL never falls below the critical oxygen concentration CCRT,which means that the respiration rate coefficient QO2 = QO2Max = Constant. ● Using the D.O. probe output and a recorder we measure directly the D.O. concentration as a function of time, t. In Situ Measurement of KLa, QO2, and CL* During Cell Growth in a Bioreactor (Cont’d) ● ● ● ● ● While we maintain the same R.P.M. of the bioreactor impeller, we turn the AIR-OFF. During the AIR-OFF period the following conditions apply: Rate of Supply of O2 = 0 No Air Present in the Bioreactor KLa = 0 because a = 0, no air bubbles present Using Eq. 2.2 for O2 Mass Balance, we have: We know cell concentration X by measuring it. Therefore, we calculate QO2 because we also measure the slope – QO2X. In Situ Measurement of KLa, QO2, and CL* During Cell Growth in a Bioreactor (Cont’d) • Fig. 2.11 Shows D.O. concentration CL inside the bioreactor = f(t) when Air is turned Off and On, always keeping the R.P.M. of the impeller the same to provide good mixing of the liquid phase. • After a period of about 5 min, a liquid sample is taken from the bioreactor to measure the cell concentration X (g dry wt./L). • The KLa, QO2, and CL* values correspond to that specific fermentation time and given cell growth conditions. • We can do many AIR-OFF and AIR-ON measurements to get all three parameters KLa, QO2, and CL* as a function of total batch fermentation time. DO2 CONC. C L (mM O 2/L) In Situ Measurement of KLa, QO2, and CL* During Cell Growth in a Bioreactor (Cont’d) CL STEADY-STATE CL,CRIT AIR-OFF AIR-ON TIME (MIN) 3-5 Transient Air-Off, Air-On Experiment in a Bioreactor System In Situ Measurement of KLa, QO2, and CL* During Cell Growth in a Bioreactor (Cont’d) ● During the AIR-OFF period the D.O. concentration CL is plotted as a function of time t from which we get the slope = - QO2X, as shown in Fig. 2.12. CL (mMO2/L) 4 SLOPE = - QO2X 3 2 1 0 0 1 2 3 4 5 6 Time, t (min) 7 8 9 D.O. concentration CL as function of time during AIR-OFF period. 10 In Situ Measurement of KLa, QO2, and CL* During Cell Growth in a Bioreactor (Cont’d) • AIR-ON Period During this period the following oxygen mass balance equation applies: • From the CL vs. time (t) data we can get In Situ Measurement of KLa, QO2, and CL* During Cell Growth in a Bioreactor (Cont’d) ● Re-arranging KLa equation and solving for CL we get ● By plotting CL vs. at a given fermentation time, t, we can get the slope which is equal to In Situ Measurement of KLa, QO2, and CL* During Cell Growth in a Bioreactor (Cont’d) ● and therefore, the value of KLa is found, and the intercept also gives the value of ● During the Air-On Period: CL* = Constant QO2 = Constant KLa = Constant CL, dCL/dt vary with time t In Situ Measurement of KLa, QO2, and CL* During Cell Growth in a Bioreactor (Cont’d) 4.4 * Intercep t = CL CL (mgO2/L) 3.8 3.2 SLOPE = -1/kLa 2.6 2.0 1.4 0.8 0.2 0.4 0.6 0.8 1.0 1.2 [dCL/dt+QO2X] 1.4 1.6 1.8 D.O. concentration CL as function of [dCL/dt + QO2X] during AIR-ON period. In Situ Measurement of KLa, QO2, and CL* During Cell Growth in a Bioreactor (Cont’d) Dynamic air-on/air-off data during Poly(glutamic acid (PGA) production by Bacillus subtilis IFO 3335 (fermentation time = 26 h). Dissolved oxygen concentration CL () as a function of time. Taken from A. Richard and A. Margaritis, “Rheology, Oxygen Transfer, and Molecular Weight Characteristics of Poly(glutamic acid) Fermentation by Bacillus subtilis”, Biotechnology and Bioengineering, Vol. 82, No. 3, p. 299-305 (2003). Agitation requirement in fermentation systems The dimensions of what is called a “standard” stirred tank bioreactor vessel with Baffles. Geometric Ratios for a Standard Bioreactor Vessel Impeller Type Di/Dt HL/Dt Flat-Blade Turbine 0.33 1.0 Paddle impeller 0. 3 3 1.0 Marine Propeller 0.33 1.0 Li/Di Wi/Di Hb/Di Wb/Dt No. Baffles 0.25 0.2 1.0 0.1 4 - 0.25 1.0 0.1 4 1.0 0.1 4 pitch = Di Where: Dt = tank diameter, HL = liquid height Di = impeller diameter Hb = impeller distance from bottom of vessel Wb = baffle width Li = impeller blade length Wi = impeller blade height Different Impeller Types. (a) Marine-type propellers; (b) Flat-blade turbine, Wi = Di/5. © Disk flat-blade turbine, Wi = Di/5, Di = 2Dt/3, Li = Di/4; (d) Curved-blade turbine, Wi = Di/3; (e) Pitched-blade turbine, Wi = Di/8; and (f) Shrouded turbine, Wi = Di/8. Mixing Patterns for Flat-Blade Turbine Impeller. Effect of Baffles. Liquid agitation in presence of a gas-liquid interface, with and without wail baffles: (a) Marine impeller and (b) Disk flat-blade turbines; (c) in full vessels without a gas-liquid interface (continuous flow) and without baffles. Mixing and Power Requirements forNewtonian Fluids in a Stirred Tank NP vs. NRe; the power characteristics are shown by the power number, NP, and the modified Reynolds number, NRe, of single impellers on a shaft. [Adopted from S. Aiba, A.E. Humphrey and N.F. Millis. “Bubble Aeration and Mechanical Agitation”. In Biochemical Engineering, 2nd Ed., Academic Press, Inc., New York (1973) 174]. Last slides figure shows relationship between NP and NRe at three different flow regimes: ● Laminar ● Transient ● Fully Turbulent for three different impeller types: ● Six-bladed flat blade turbine ● Paddle impeller ● Marine Propeller The power number is given by NP = Pgc/n3Di5 The impeller Reynolds number is given by NRe = nDi2/ Where: NRe = dimensionless Reynolds number NP = dimensionless Power number P = Un-gassed power for liquid (no air), W gc = 1, for SI units system n = Impeller rotational speed, revolutions per sec., (s-1) Di = Impeller diameter, m = Density of liquid, kg/m3 = Viscosity of liquid, (N.m)/(s) For six-bladed flat-blade turbine impeller (cf. Fig. 3.3), the mixing becomes fully turbulent at an impeller Reynolds number NRe = 3,000. Power number NP = 6 (constant) at NRe > 3,000 Different Types of impellers have different power characteristics For six-bladed flat turbine and for turbulent conditions: NP = 6 = Pgc/n3Di5 or P = (6)(n3Di5)/(gc) At NRe = 3,000 the corresponding impeller speed is: n = (3,000)()/(Di2)() ● Earlier equation is an estimate of the minimum impeller speed, n, of a 6-flat blade turbine impeller for the on-set of turbulent flow within the stirred tank bioreactor vessel. ● Equation also shows that for a fluid of a given density, : P n3Di5 This is an important consideration for bioreactor vessel scale-up. Calculation of the Required Volumetric Mass Transfer Coefficient, KLa, During Fermentation, and Gassed Power, Pg. At Steady-State Operation of an Aerobic Fermentation: OTR = OUR KLa[CL* - CL] = QO2X For a given QO2, X, and (CL* - CL), KLa can be calculated using earlier equation For a given VL and Ug, Pg can be calculated using the empirical correlation for KLa given KLa = C [Pg/VL]m [Ug]k