DNA, RNA, and Protein Synthesis Function of DNA as “master” program • DNA codes for the primary structure of a protein which impacts the tertiary structure, which determines the function of the protein • DNA doesn’t control protein synthesis directly…instead DNA VS RNA Differences Between DNA and RNA DNA double-stranded RNA single-stranded sugar = deoxyribose sugar = ribose bases = A,T,C,G bases = A,U,C,G (uracil takes the place of thymine) Types of RNA Messenger RNA (mRNA) – temporary copy of a gene that carries information from nucleus to ribosome Ribosomal RNA (rRNA) – a type of RNA that makes up ribosomes (where protein synthesis takes place) Transfer RNA (tRNA) – a type of RNA that attaches to the amino acids used to make the protein mRNA tRNA rRNA How is DNA like the English language? • Language analogy – 26 letters in the English language that can combine to make millions words • Genetic code – DNA is made of 4 letters (Nitrogen bases), and 3 letters form a word (amino acid); but there are only 20 possible “words” *So how many DNA nucleotides are needed to code for the 20 possible amino acids? Why are Proteins important? • Material that makes up cell structures or tissues (keratin, collagen, myosin, etc.) • Enzymes that make the chemical reactions of living systems happen quickly • Proteins bond to other molecules (ex. hemoglobin & oxygen in blood) • Key role in communication; hormones – chemical signals given off by cells that regulate behavior of cells in different area Protein Synthesis requires 2 processes: 1. Transcription – the process of making mRNA from DNA - occurs in nucleus 2. Translation – the process in which amino acids (coded for in the mRNA) are added to a protein being made = PROTEIN SYNTHESIS - occurs in cytoplasm RNA Synthesis (Transcription) • Produces mRNA • One strand of DNA acts as the template for RNA synthesis (C ↔ G; A → U; T → A) • Main enzyme = RNA polymerase, which adds the RNA nucleotides to pair with the DNA • Occurs in 3 stages Transcribe the following DNA: Transcription – 3 Stages 1. Initiation - RNA polymerase binds to the DNA at the promoter region. It is directed to this region by proteins called initiation factors. 2. Elongation - RNA polymerase moves along the coding strand of DNA away from the promoter, building the RNA strand. 3. Termination - RNA polymerase reaches the terminator region of the DNA & is released from the DNA with the primary transcript. RNA Processing • All 3 types of RNA (mRNA, tRNA, & rRNA) are processed in the nucleus before they leave it. • This can involve adding, chemically changing, and/or removing nucleotides. (proofreading) RNA Splicing All RNA transcripts undergo processing called splicing. • The removal of meaningless segments of RNA, called introns, and fusing together the remaining, meaningful sections, called exons. • Requires precise recognition of the site to be cut by a restriction enzyme Protein Synthesis Step 2- Translation • mRNA is translated into the amino acid sequence of a protein. • It happens on ribosomes in the cytoplasm. • ATP provides the energy to form the bonds. • Divided into same 3 stages as Transcription: initiation, elongation, & termination. • tRNA acts as a carrier molecule that transfers amino acids to the ribosome. • A tRNA anticodon matches with an mRNA codon. (3 nitrogen bases) Practice: mRNA: AUG CGA AAC UCA tRNA: tRNA and Amino Acids -There are 64 possible codon combinations (3 nitrogen bases) BUT only 20 amino acids. - SO – some codon “words” code for the same amino acid. - We can interpret or “read” this code using a codon table: Let’s try “AUG” Now try: • CCU • CCG • UGA • GGA What do you notice?