IB Biology 3 Chemistry of Life 3.2 Carbohydrates, Lipids and Proteins All syllabus statements ©IBO 2007 All images CC or public domain or link to original material. http://commons.wikimedia.org/wiki/File:Burger_King_Angus_Bacon_%26_Cheese_Steak_Burger.jpg Carbs Lettuce makes it healthy, right? Proteins & Fats Fats 3.2.1 Distinguish between organic and inorganic compounds Organic molecules are based on carbon and are in living things. Inorganic compounds are everything else plus carbonates (e.g. HCO3⁻ and CaCO3), carbon dioxide (CO2 )and carbon monoxide (CO). http://commons.wikimedia.org/wiki/File:GraphiteUSGOV.jpg 3.2.2 Identify amino acids, glucose*, ribose* and fatty acids from diagrams showing their structure Alanine Arginine Leucine Here are three of the twenty-one amino acids found in eukaryotes. Identify what parts of their structures are identical. *glucose and ribose shown in 3.2.3 http://commons.wikimedia.org/wiki/File:Alanine.png http://commons.wikimedia.org/wiki/File:Arginine.png http://commons.wikimedia.org/wiki/File:Leucine.png Alanine Yeah, that bit… Arginine Leucine Drawn slightly differently you can see the bit that is always the same and the R Group. The R group is like x in an equation. It is a variable that stands in for a bunch of different side chains http://commons.wikimedia.org/wiki/File:AminoAcidball.svg The amine group (NH2) Look out for this structure The acid group (COOH) Hmmm… an amine group and an acid group… What shall we call this class of molecule? http://commons.wikimedia.org/wiki/File:Filos_tercer_logo.JPG The amine and acid groups could be at opposite ends, the R could be on top, bottom or side depending on orientation. Or it could be represented differently: Don’t freak out, you don’t need to know them all, just the general formula http://commons.wikimedia.org/wiki/File:Amino_Acids.svg General structural formula for a fatty* acid H3C (CH2)n Chain (or ring) of carbon and hydrogen atoms *I prefer “big boned” O C OH Carboxylic group http://www.eufic.org/article/pt/nutricao/gorduras/expid/23/ 3.2.3 List three examples each of monosaccharides, disaccharides and polysaccharides Monosaccharide #1 Glucose has the formula C6H12O6 It forms a hexagonal ring (hexose) Glucose is the form of sugar that fuels respiration Glucose forms the base unit for many polymers 5 of the carbons form corners on the ring with the 6th corner taken by oxygen http://commons.wikimedia.org/wiki/File:Glucose_crystal.jpg Monosaccharide #2 Galactose is also a hexose sugar It has the same formula C6H12O6 but is less sweet Spot the difference Galactose Glucose Most commonly found in milk, but also found in cereals http://commons.wikimedia.org/wiki/File:Galactose-3D-balls.png http://commons.wikimedia.org/wiki/File:Alpha-D-glucose-3D-balls.png Monosaccharide #3 Ribose is a pentose sugar, it has a pentagonal ring It forms the backbone of RNA Deoxyribose differs as shown in the diagram, and forms the backbone of DNA Original owner of image unknown Monosaccharide #4 You only need 3, this is a bonus! Fructose is another pentose sugar Commonly found in fruits and honey It is the sweetest naturally occurring carbohydrate http://www.flickr.com/photos/max_westby/4045923/ http://commons.wikimedia.org/wiki/File:Red_Apple.jpg http://commons.wikimedia.org/wiki/File:3dfructose.png Disaccharide #1 (Literally “two sugars”) Lactose (C12H22O11) is most commonly found in milk The two subunits that make up lactose are glucose and galactose, our friends from a couple of slides ago. http://www.flickr.com/photos/vermininc/2764742483/ http://commons.wikimedia.org/wiki/File:Alpha-lactose-from-xtal-3D-balls.png Disaccharide #2 Sucrose (C12H22O11) is also known as table sugar Themonosaccharides two subunits that The two make upitsucrose that make up are are glucose fructose. glucose andand fructose http://commons.wikimedia.org/wiki/File:Sucrose.gif http://www.flickr.com/photos/carowallis1/4388310394/ Disaccharide #3 Maltose (C12H22O11) is a dimer of glucose Gosh! Isn’t it sweet?! The two glucose molecules are holding hands. http://commons.wikimedia.org/wiki/File:Maltose_syrup.jpg http://commons.wikimedia.org/wiki/File:Maltose_Haworth.svg Polysaccharide #1 Glycogen (C6H10O5)n is a polymer made of repeating glucose subunits It is not just a simple chain, it branches many times http://en.wikipedia.org/wiki/File:Glycogen_spacefilling_model.jpg Polysaccharide #2 Amylose is a form of starch, and is made of repeating glucose units Typically an amylose molecule is made up of 300-3000 glucose units, but it can be many more http://www.flickr.com/photos/caroslines/5534432762/ http://commons.wikimedia.org/wiki/File:Amylose3.svg Polysaccharide #3 Cellulose (C6H10O5)n is a linear molecule made of repeating glucose units Multiple hydrogen bonds form between adjacent strands. Making strong microfibrils. http://www.flickr.com/photos/caroslines/5534432762/ http://en.wikipedia.org/wiki/File:Cellulose_spacefilling_model.jpg 3.2.4 State one function of glucose, lactose and glycogen in animals, and of fructose, sucrose and cellulose in plants After expending 10 slides on a “List” question, let’s answer this one in a table! Carb. Molecule Function Glucose Monosaccharide Used in respiration to produce ATP Lactose Disaccharide Energy source in milk Glycogen Polysaccharide Short term energy storage in liver and muscles Fructose Monosaccharide Energy source in fruits and honey Sucrose Disaccharide Convenient form for transferring energy around plants Cellulose Polysaccharide Structural component of the cell wall http://www.flickr.com/photos/pasma/575078217/ http://www.flickr.com/photos/93387088@N04/8527309132/ 3.2.5 Outline the role of condensation and hydrolysis in the relationships between monosaccharides, disaccharides and polysaccharides; between fatty acids and triglycerides; and between amino acids and polypeptides. Two ways to help you remember what happens in condensation: • Water (H20) is formed, like condensation on a glass • The former separate molecules have “squished “ together and are “condensed” http://www.flickr.com/photos/good_day/315807334/ Hydrolysis (water- splitting) H2O is split in the process of breaking apart a polymer, typically one H will bind to one of the resultant molecules and OH will bind to the other. Condensation reactions joining two glucose molecules to make maltose + water The bond between saccharide units is called a glycosidic bond Original source of glucose maltose image unknown You might see the term “dehydration reaction” mentioned interchangeably with condensation reaction. Technically a dehydration reaction is when the water molecule has come from one of the reactants. Whereas for a condensation reaction, part of each water molecule has come from each reactant. In the case of the previous slide, OH from one glucose and H from the other. http://www.flickr.com/photos/zachd1_618/5738829330/ Hydrolysis reactions break starch down into maltose molecules. Amylase in saliva at work See 6.1 Hydrolysis of lactose into galactose and glucose Lactase at work See 3.6.5 http://commons.wikimedia.org/wiki/File:Lactose_hydrolysis.svg http://commons.wikimedia.org/wiki/File:Amylase_reaction.png Condensation reactions between amino acids lead to dipeptide molecules Keep adding amino acids and you end up with a polypeptide. These reactions are catalysed by ribosomes in cells See 3.5 and HL 7.4 http://commons.wikimedia.org/wiki/File:Peptidformationball.svg Hydrolysis reactions break peptides down into their constituent amino acids. The body can then use those amino acids to make new peptides/proteins. Pepsin is an enzyme in the stomach that hydrolyses proteins See 6.1 http://commons.wikimedia.org/wiki/File:Amino_acid4.png Condensation reaction between glycerol and fatty acids Glycerol Three Fatty Acids Hydrolysis is the reverse of this process, catalysed by lipase Triglyceride 3H2O Lipids are glycerol combined with 1, 2 or 3 fatty acids, therefore triglycerides are lipids 3.2.6 State 3 functions of lipids 1) Insulation: look how round this seal is! http://www.flickr.com/photos/ucumari/2585053774/ 2) Energy Storage: the fat on this bacon was a piggy’s bank of energy http://www.flickr.com/photos/johnnystiletto/5411371373/ 3) Cell membranes: look all those lovely phospholipids! Take a moment to review 2.4 cell membranes and name all of the bits in this diagram http://commons.wikimedia.org/wiki/File:Cell_membrane_detailed_diagram_blank.s vg 3.2.7 Compare the use of carbohydrates and lipids in energy storage Energy Ratio by mass Fat : Carbs : Protein 2:1:1 The energy stored in lipids is primarily in the fatty acid side chains, so triglycerides are used for energy storage rather than diglycerides or monoglycerides So it makes the most sense for animals to store long term energy reserves as fat. The same amount of energy stored as carbohydrates would mass twice as much. http://www.flickr.com/photos/markscott/162791929/ Glycogen is the medium-term energy storage molecule in animals. It is stored in the liver and muscles. The energy stored in glycogen is more readily available than the energy stored in fat. Glucose in the bloodstream is for immediate use and will either be used in respiration to yield ATP or converted to glycogen or fat Wallet (Glycogen) An analogy: easy to get to, would be too big if you put in all your money You are paid in cash (Glucose) Bank (Fat) Spend it! (Respiration) Can put lots of money here, more of a hassle to get it back out Unlike most animals, most plants do not need to move, so they store their energy as carbohydrates. Especially plants with storage roots, shoots or tubers http://www.flickr.com/photos/87106931@N00/8359169832/ Seeds are the exception, they need to disperse to spread the species. So they use lipids for energy storage. Thus sunflower oil, canola oil etc Further information: Three of the best sites for IB-specific Biology information. The top link takes you to the PPT by Stephen Taylor