Rietveld Analysis of X-ray and neutron diffraction patterns Analysis of the whole diffraction pattern Profile fitting is included Not only the integrated intensities Refinement of the structure parameters from diffraction data Quantitative phase analysis Lattice parameters Atomic positions and occupancies Temperature vibrations Grain size and micro-strain (in the recent versions) Not intended for the structure solution The structure model must be known before starting the Rietveld refinement 1 Non-refinable parameters in the Rietveld method Space group Chemical composition Analytical function describing the shape of the diffraction profiles Wavelength of the radiation (can be refined in Fullprof or in LHRL; suitable for the synchrotron data) Intensity ratio in Ka1, Ka2 doublet Origin of the polynomial function describing the background 2 Rietveld analysis History Computer programs H.M. Rietveld - neutron data, fixed wavelength D.E. Cox - X-ray data R.B. Von Dreele - neutron data, TOF D.B. Wiles & R.A. Young - X-ray data, 2 wavelengths, more phases Helsinki group - spherical functions for preferred orientation but a single wavelength Fullprof, LHRL - surface absorption BGMN - automatic calculation, crystallite size and microstrain in form of ellipsoids P. Scardi et at - size, strain H.M. Rietveld DBW2.9, DBW3.2 (Wiles & Young) University of Helsinki Fullprof (J. Rodriguez-Carvajal) BGMN (R. Bergmann) LHRL (C.J. Howard & B.A. Hunter) P. Scardi et al. Bärlocher GSAS 3 Integral intensity Calculated intensity: yic yib Gikp I k p k G is the normalised profile function, I is the intensity of the k-th reflection. The summation is performed over all phases p, and over all reflections contributing to the respective point. The intensity of the Bragg reflections I k Smk Lk Fk Pk Ak Ek 2 4 Scattering by one elementary cell Structure factor n Fk N j f j exp 2ih tk r j 2 2h tk B j h k j 1 Fk N j f j exp 2i hx j ky j z j n j 1 exp 11h 2 22k 2 33 2 2 12hk 2 13h 2 23k Calculation is performed in the oblique axes (for the respective crystal system) 5 Temperature vibrations Atomic displacement (in Cartesian co-ordinates) B j u j u tj u12 u1u2 u1u3 u1u3 u 2 u3 2 u3 u1u2 u22 u 2 u3 1 a * cot * a * 1 t B 2 F βF; F 0 1 b* sin * 2 0 0 a cos b cos a c 6 Crystal symmetry restrictions Six anisotropic temperature factors per atom in a general case (symmetrical matrix) For an atom in a site of special symmetry the B-matrix must be invariant to the symmetry operations (in the Cartesian axis system) P t BP B An example - rotation axes parallel with z cos a P sin a 0 sin a 0 cos a 0 0 1 7 Temperature vibrations - special cases Isotropic atomic vibrations sin 2 Fk N j f j exp 2i hx j ky j z j exp B j 2 j 1 n B j 8 2 u 2 j Overall temperature factor 2 n 2 2 sin N j f j exp 2ihx j ky j z j Fk exp 8 u 2 j 1 8 Scattering by one atom Atomic scattering factor sin 2 c Df Df f ai exp bi 2 i 1 4 a, b, c are from the “International Tables for Crystallography” Df’, Df” must be checked and changed for synchrotron radiation Another possibility Include our set of the atomic scattering factors 9 Preferred orientation of grains (texture) Gauss-like distribution 1 G exp G sin a 1 G exp G sin a Pk G2 1 G2 exp G1a k2 Pk G2 Pk G2 2 2 1 k 3 2 1 k March-Dollase correction 1 Pk G12 cos 2 a k sin 2 a k G1 3 2 Spherical functions 10 Absorption correction 0.0 For flat samples - micro-absorption and surface absorption (Hermann & Ermrich) 1 P0 1 a 0 sin 1 1 sin Apparent decrease of the temperature factors or even “negative” temperature factors ln (Intensity ratio) Ak 1 P0 Ps ( ) -0.1 -0.2 -0.3 -0.4 # 1 # 2 -0.5 -0.6 0.0 0.1 0.2 (sin / ) 0.3 2 11 Absorption correction For thin samples (powder on glass) in symmetrical arrangement thick sample, high absorption t : A 1 (2 ) thin sample, low absorption t 0: A t sin experim ental data absorption factor apparent tem perature log (Intensity ratio) 1 2t I I0 1 exp 2 sin 0.0 -0.1 -0.2 -0.3 -0.4 0.00 0.05 0.10 0.15 0.20 0.25 (sin / ) 0.30 0.35 0.40 2 12 Extinction correction (for large crystallites) Ek EB cos 2 k EL sin 2 k Extinction for the Bragg case ( = 90) 1 EB 1 x Extinction for the Laue case ( = 0) F x D k Ve 2 x x 2 5x3 1 for x 1 2 4 48 EL 2 1 1 3 15 for x 1 2 3 x 8 x 128 x 1024 x 13 Profile functions Gauss Lorentz (Cauchy) C 2 exp 02 2 i 2 k ; C0 4 ln 2 k k C0 G L 2 C0 1 ; C0 4 k 1 C0 2 2 2 i k k2 C0 k 4 2 1 2 1 2 2 i k 2 k m Pearson VII PVII Pseudo-Voigt pV L 1 G m ; C0 1 2 2 1 m 0.5 2 m m k2 U tan 2 k V tan k W 14 Background Subtraction of the background intensities Interpolation of the background intensities Polynomial function (six refinable parameters) Origin of the background - improves the pivoting of the normal matrix A special function for amorphous components sin B2 m1Q yib B0 B1Q B2m B2 m1Q m 1 n 15 Minimisation routine Uses the Newton-Raphson algorithm to minimise the quantity R wi yio yic ; wi 1 yi 2 i Normal matrix MDx Dy yic yic M mn wi i xm xn y ym wi ic yio yic0 xm i wi yio yic 2 1 m M mm i N P 16 Reliability factors The profile R-factor ……… y y y io Rp ic i i The weighted Rp ……………………………………… I I I ko The Bragg R-factor ……… RB wi yio yic i wi yio2 i 2 io Rwp kc i ko i Rexp The expected Rf ……………………………………… The goodness of fit GOF 1 2 w y i io yic i N P 2 Rwp R exp 2 N P w y2 i io i 1 2 17 Connecting parameters, constrains Young - parameter coupling Coding of variables: number of the parameter in the normal matrix + weight for the calculated increment Lattice parameters in the cubic system: 41.00 41.00 41.00 Fractional co-ordinates at 12k in P63/mmc, (x 2x z): 20.50 21.00 31.00 Fullprof - constrains Inter-atomic distances may be constrained BGMN - working with molecules Definition of the molecule (in Cartesian co-ordinates) Translation and rotation of the whole molecule 18 Structure of the input file (Fullprof for anglesite) COMM PbSO4 D1A(ILL),Rietveld Round Robin, R.J. Hill,JApC 25,589(1992) !Job Npr Nph Nba Nex Nsc Nor Dum Iwg Ilo Ias Res Ste Nre Cry Uni Cor 1 7 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 ! !Ipr Ppl Ioc Mat Pcr Ls1 Ls2 Ls3 Syo Prf Ins Rpa Sym Hkl Fou Sho Ana 0 0 1 0 1 0 0 0 0 1 6 1 1 0 0 1 1 ! ! lambda1 Lambda2 Ratio Bkpos Wdt Cthm muR AsyLim Rpolarz 1.54056 1.54430 0.5000 70.0000 6.0000 1.0000 0.0000 160.00 0.0000 !NCY Eps R_at R_an R_pr R_gl Thmin Step Thmax PSD Sent0 5 0.10 1.00 1.00 1.00 1.00 10.0000 0.0500 155.4500 0.000 0.000 ! ! Excluded regions (LowT HighT) 0.00 10.00 154.00 180.00 ! 34 !Number of refined parameters ! ! Zero Code Sycos Code Sysin Code Lambda Code MORE -0.0805 81.00 0.0000 0.00 0.0000 0.00 0.000000 0.00 0 ! Background coefficients/codes 207.37 39.798 65.624 -31.638 -90.077 47.978 21.000 31.000 41.000 51.000 61.000 71.000 ! Data for PHASE number: 1 ==> Current R_Bragg: 4.16 PbSO4 !Nat Dis Mom Pr1 Pr2 Pr3 Jbt Irf Isy Str Furth ATZ Nvk Npr More 5 0 0 0.0 0.0 0.0 0 0 0 0 0 0.00 0 7 0 Pnma <-- Space group symbol !Atom Typ X Y Z Biso Occ /Line below:Codes Pb PB 0.18748 0.25000 0.16721 1.40433 0.50000 0 0 0 171.00 0.00 181.00 281.00 0.00 S S 0.06544 0.25000 0.68326 0.41383 0.50000 0 0 0 191.00 0.00 201.00 291.00 0.00 O1 O 0.90775 0.25000 0.59527 1.97333 0.50000 0 0 0 211.00 0.00 221.00 301.00 0.00 O2 O 0.19377 0.25000 0.54326 1.48108 0.50000 0 0 0 231.00 0.00 241.00 311.00 0.00 O3 O 0.08102 0.02713 0.80900 1.31875 1.00000 0 0 0 251.00 261.00 271.00 321.00 0.00 ! Scale Shape1 Bov Str1 Str2 Str3 Strain-Model 1.4748 0.0000 0.0000 0.0000 0.0000 0.0000 0 11.00000 0.00 0.00 0.00 0.00 0.00 ! U V W X Y GauSiz LorSiz Size-Model 0.15485 -0.46285 0.42391 0.00000 0.08979 0.00000 0.00000 0 121.00 131.00 141.00 0.00 151.00 0.00 0.00 ! a b c alpha beta gamma 8.480125 5.397597 6.959482 90.000000 90.000000 90.000000 91.00000 101.00000 111.00000 0.00000 0.00000 0.00000 ! Pref1 Pref2 Asy1 Asy2 Asy3 Asy4 0.00000 0.00000 0.28133 0.03679-0.09981 0.00000 0.00 0.00 161.00 331.00 341.00 0.00 19 Quantitative phase analysis Volume fraction SVe2 V 2 SV e p p Weight fraction SZMVe2 m 2 SZMV e p p Use the correct occupancies : N = occupancy / max # of Wyckoff positions 20 Tips and tricks (on the course of the refinement) Instrumental parameters Structure parameters Scale factor (always) Background (1) Line broadening and shape (3) Zero shift (4) Sample displacement or transparency (5) Preferred orientation (7) Surface absorption (7) Extinction (7) Scale factor (always) Lattice parameter (2) Atomic co-ordinates (6) Temperature factors (8) Occupancies (8), N = occ/max(N) important for quantitative phase analysis 21 Tips and tricks (how to obtain reliable data) Use only good adjusted diffractometer Bad adjustment causes the line shift and broadening; the latter cannot be corrected in the Rietveld programs Use only fine powders Coarse powder “randomises” the integral intensities Coarse powder causes problems with rough surface Use sufficient counting time The error in intensity is proportional to sqrt(N) as for the Poisson distribution Apply dead-time correction For strong diffraction lines, the use of the dead-time correction is strongly recommended 22 Effect of the grain size Variations in observed intensities (bad statistics) Figure: Effect of specimen rotation and particle size on Si powder intensity using conventional diffractometer and CuKa radiation. International Tables for Crystallography, Vol. C, ed. A.J.C. Wilson, Kluwer Academic Publishers, 1992. 23 In the Rietveld refinement don’t refine parameters which are fixed by the structure relations (fractional co-ordinates, lattice parameters) refine all three parameters describing the line broadening concurrently refine the anisotropic temperature factors from X-ray powder diffraction data use diffraction patterns measured in a narrow range forget that the number of structure parameters being refined cannot be larger than the number of lines 24 Corundum 20-140 20-120 20-100 20-80 Reference a[Å] 4.7584(2) 4.7585(2) 4.7587(2) 4.7591(3) 4.7586(1) c[Å] 12.9895(3) 12.9899(4) 12.9905(4) 12.9914(5) 12.9897(1) z(Al) 0.3521(1) 0.3521(1) 0.3520(1) 0.3521(1) 0.35216 B(Al) [Å ] 0.41(1) 0.38(2) 0.51(3) 0.59(4) x(O) 0.3060(2) 0.3062(2) 0.3061(3) 0.3063(3) B(O) [Å ] 0.43(3) 0.34(3) 0.36(4) 0.33(5) ZER 0.055(9) 0.075(9) 0.090(12) 0.117(25) DSP -0.091(8) -0.110(8) -0.124(11) -0.150(23) TSP 0.003(1) 0.002(2) 0.003(3) 0.002(5) R(Bragg) 3.8% 3.6% 3.2% 2.7% 2 2 0.30624 0.6% 25 Auxiliary methods and computer programs The most critical parameters for the convergence of the Rietveld refinement - lattice parameters FIRESTAR 1 2 sin 2 d hkl sin i i 2 1 h 2 a *2 k 2b *2 2 c *2 2hka * b * cos * 2 d hkl 2 2kb * c * cos a * 2hc * a * cos * 2 1 2 d hkl min Only the crystal system must be known (not the space group) The diffraction pattern must be indexed 26 Problems with positions of diffraction lines Residual stresses in bulk materials Anisotropic deformation of crystallites (anisotropy of mechanical properties) Presence of errors in the structure (stacking faults, …) Use of the programs working with net integral intensities (POWOW, POWLS) is recommended How to get the net intensities? Numerical integration (not for the overlapped lines) Profile fitting using analytical functions (for overlapped lines) - DIFPATAN 27 Indexing of the diffraction pattern in unknown phases Computer program TREOR (Trials and Errors) Requirements A single phase in the specimen High-quality data (particularly, the error in the positions of diffraction lines must not exceed 0.02° in 2) Very good alignment of the diffractometer or the use of an internal standard (mixed to the specimen) 28