EL-SEWER FEMS Microbiology Letters 144 (1996) 81-87 Molecular and genetic analysis of multiple changes in the levels of production of virulence factors in a subcultured variant of Streptococcus mutans Yamashita, Yuichi Tsukioka, Yoshio Nakano, Yukie Shibata, Toshihiko Koga * Department of Preventive Dentistry, Kyushu University Faculty of Dentistry, 3-l-l Maidashi, Higashi-ku. Fukuoka 812-82, Japan Received 27 June 1996; revised 9 August 1996; accepted 13 August 1996 Abstract We previously isolated a variant strain, XclOOL, which shows decreased production of a surface protein antigen with a molecular mass of 190 kDa (PAc), after repeated subculturing of Streptococcus mutans strain Xc [Koga, T. et al. (1989) J. Gen. Microbial. 135, 3199-32021. In the present study, the levels of expression of the gtfB, gtfC, gtfa and ftf genes coding for polysaccharide-synthesizing enzymes in strain XclOOL were compared with those in strain Xc. Western blot analysis revealed multiple differences in the levels of production of these enzymes between these two strains. The amounts of the gtfB and gtfC gene products responsible for water-insoluble glucan synthesis in strain XclOOL were lower than those in strain Xc, whereas the amounts of the gtj2I and&-gene products responsible for water-soluble glucan synthesis and fructan synthesis, respectively, in strain XclOOL were higher than those in strain Xc. Northern blot analysis revealed that the amounts of the four enzymes and PAc produced by strain XclOOL reflected the relative amounts of mRNAs from the genes. The chloramphenicol acetyltransferase gene was fused with each of these live genes, and the transcriptional activity of each gene in strain XclOOL was quantitatively compared with that in strain Xc. The chloramphenicol acetyltransferase assay also indicated that the phenotypic differences between strain Xc and strain XclOOL were due to differences in the transcriptional activities of the virulence genes. No differences in the nucleotide sequences of the promoter regions of the gtfB, gtfC, gtfD, ft?f and pat genes were found between strain Xc and strain XclOOL. It is possible that a factor(s) affecting the levels of transcription of the multiple virulence genes exists in S. mutans. Keywords: Streptococcus mutans; Virulence factor; Surface protein antigen; Glucosyltransferase; Fructosyltransferase 1. Introduction Streptococcus mutans has been strongly implicated * Corresponding author. Tel.: +81 (92) 641-1151; Fax: +81 (92) 641-3206; E-mail: toshidha@mbox.nc.kyushu-u.ac.jp as a causative agent of human dental caries [l]. S. mutans produces several virulence factors such as giucosyltransferases [2], fructosyltransferase [2] and a cell-surface protein antigen with a molecular mass of 190 kDa, which has been variously designated antigen B, I/II, IF, MSL-1, Pl, SR and PAc 0378-1097/96/$12.00 Copyright 0 1996 Federation of European Microbiological Societies. Published by Elsevier Science B.V. PII SO378-1097(96)00342-4 Downloaded from http://femsle.oxfordjournals.org/ by guest on March 6, 2016 Yoshihisa 82 Y. Ycrmushito CI a/. I FEMS Microbiology Letters 144 (19961 XIly7 2. Materials and methods 2.1. Bacterial strains and culture conditions Strains of S. mutans and Escherichia coli were maintained and grown routinely as previously described [8]. 2.2. Antisera Rabbit anti-PAc serum was prepared as previously described [9]. Rabbit anti-glucosyltransferase-I serum and anti-glucosyltransferase-S serum were kindly provided by K. Fukushima, Nihon University, Matsudo Dental School, Matsudo, Japan. Rabbit antifructosyltransferase serum was obtained from M. Inoue and S. Sato, Kagoshima University, Faculty of Dentistry, Kagoshima, Japan. 2.3. DNA manipulations DNA isolation, endonuclease restriction, ligation, DNA sequencing and transformation of S. mutans and E. coli were carried out as previously described [8]. Southern blot analysis was performed with di- goxigenin (DIG)-labeled probes using a nonradioactive DIG DNA LaBeling And Detection kit (DIGELISA) (Boehringer GmbH) according to the instructions of the supplier. 2.4. Western blot analysis of’ virulence jkctors Strains Xc and XclOOL were grown anaerobically to stationary phase in brain heart infusion (BHI; Difco Laboratories) broth, and 0.2 ml of the culture broth was diluted with 2 ml of fresh BHI broth. The culture was incubated anaerobically at 37°C until an optical density at 550 nm (ODssa) of 1.0 was attained. Samples (0.6 ml) of these cultures were precipitated with two volumes of acetone, and dried at room temperature for 15 min. The dried samples were analyzed by Western blotting using appropriate rabbit anti-virulence factor sera as previously described [9]. 2.5. Northern blot analysis Aliquots of overnight cultures of strains Xc and XclOOL (0.2 ml each) were inoculated into 12 ml of BHI broth prewarmed to 37°C. After these cultures were incubated at 37°C for 2 h, glycine was added to a final concentration of 1%. The growth was continued until an ODss0 of about 0.4 was attained. After the cells were harvested by centrifugation, total RNA was extracted according to the method of Shiroza and Kuramitsu [lo]. The extracted RNA was purified with ISOGEN-LS (Nippon Gene Inc.). Four DIG-labeled PCR probes (probe P for pat, probe I for gtfB and gtfC, probe S for gtfD and probe F for fttf> were prepared to determine the amounts of mRNA transcripts specific for the five virulence factors. The 1.l-kb SpeI-Sac1 fragment of pat, the 1.6-kb BamHI fragment of gtfB, the 1.4-kb BstPI-PstI fragment of gtfD and the 1.3-kb StyI-ClaI fragment of ftA which were ligated into the multiple cloning sites of pBluescript, were used as templates for PCR amplification of probe P, probe I, probe S and probe F, respectively. -2lM13 and M13PRl primers were used as primers. Target mRNA was identified with the appropriate DIG-labeled probe using a nonradioactive DIG-ELISA according to the instructions of the supplier. Downloaded from http://femsle.oxfordjournals.org/ by guest on March 6, 2016 [3]. Hydrophobic interaction between PAc and acquired pellicles is considered to be important for the initial attachment of S. mutuns to tooth surfaces [3]. Synthesis of water-insoluble glucan, catalyzed by glucosyltransferase-I and glucosyltransferase-SI, is necessary for the accumulation of S. mutans cells on tooth surfaces [1,2]. Water-soluble glucan and fructan, the synthesis of which is catalyzed by glucosyltransferase-S and fructosyltransferase, respectively, serve as storage reservoirs for carbon, and contribute to the pathogenesis of S. mutans [446]. We previously isolated a variant strain, XclOOL, which shows decreased production of PAc after repeated subculturing of S. mutuns strain Xc which was freshly isolated from human dental plaque [7]. In the present study, we found multiple differences in the levels of expression of the genes coding for polysaccharide-synthesizing enzymes between these two strains. In this report, we describe the molecular and genetic analysis of the phenotypic changes in the variant strain. Y Yamashita et al. I FEMS Microbiology Letters 144 (1996) 81-87 83 Table 1 S. murans strains used in this study Relevant characteristics Reference or source xc Wild-type strain (parent strain of XclOOL) Subcultured variant of strain Xc showing decreased level of PAc pro duction Em’; strain Xc carrying the cat gene fused with the pat gene EmT; strain XclOOL carrying the cat gene fused with the pat gene Em’; strain Xc carrying the cat gene fused with the gtfB gene Em’; strain XclOOL carrying the cat gene fused with the glfB gene Em’; strain Xc carrying the car gene fused with the grfC gene Em’; strain XclOOL carrying the car gene fused with the grjC gene Em’; strain Xc carrying the cat gene fused with the gtfD gene Em’; strain XclOOL carrying the car gene fused with the gtfD gene EmI ; strain Xc carrying the cat gene fused with the fif gene Em’; strain XclOOL carrying the car gene fused with the ftf gene [71 [71 This This This This This This This This This This XclooL xc11 XclOOLl1 xc12 Xc1OOL12 xc13 xc1ooL13 xc14 XclOOL14 xc15 XclOOL15 2.6. Construction of chloramphenicol acetyltransferase f CA T) and virulence factors fusion strains The l.O-kb BamHI fragment containing a promoterless cat gene isolated from pMH109 [l l] was ligated to the l.O-kb fragment containing the erythromycin resistance gene from pAMP1 [ 121. The resultant 2.0-kb cat cartridge had the erythromycin resistance gene downstream of the cat gene and the both genes were in the same orientation. The plasmid composed of the 1.I-kb SpeI-Sac1 fragment from the pat gene, the cat cartridge, and pUC replicon was constructed. The cat cartridge was located immediately downstream from the 1.1 -kb SpeI-Sac1 fragment in the same orientation. The intact plasmid was introduced into the pat gene of strains Xc and XclOOL, and the resultant strains were designated strains Xc11 and XclOOLll (Table 1). A series of derivatives of strains Xc and XclOOL carrying the cat gene fused with the gtfB, gtfC, gtfD and ftf genes were constructed by allelic exchange with the 1.6-kb BamHI fragment of gtfB gene, the 1.4-kb BstPI-PstI fragment of gtfD and the 2.2-kb BanII-ClaI fragment of ftf interrupted by the cat cartridge in the same orientation (Table 1). Since there is a high sequence identity between the gtfB gene and the gtfC gene, it is possible that both types of transformants acquiring the cat cartridge fused with gtfB and gtfC are isolated by homologous recombination with the 1.6-kb BamHI fragment of gtfB gene interrupted study study study study study study study study study study by the cat cartridge. The construction of transformants with fusion between the cat and virulence factor genes from strains Xc and XclOOL was confirmed by Southern blot analyses of EcoRI digests of chromosomal DNA from the obtained transformants. These transformants were used for monitoring of the level of expression of each virulence factor gene. 2.7. CAT assay CAT-specific activity in cell lysates of S. mutans strains carrying the cat gene fused with the virulence genes was measured by the method of Kiska and Macrina [13]. One unit of CAT activity was defined as the amount of enzyme which catalyzed the acetylation of 1 pmol of chloramphenicol per min at 37°C. The value of CAT activity in cell lysates of strain Xc was defined as a background adsorption. This background value was subtracted from the value of CAT activity in cell lysates of the S. mutans strains carrying a fusion between cat and the virulence factor genes. Protein was quantified by the BioRad protein assay reagent with bovine serum albumin as a standard. 2.8. Primer extension analysis The transcriptional start site of the pat gene was determined by primer extension with biotinylated oligonucleotide primers, PAC2 (5’-GTCCTGCTACA- Downloaded from http://femsle.oxfordjournals.org/ by guest on March 6, 2016 Bacterial strain Y. Yumashitu et (11.I FEMS Microbiology Letters 144 (1996) XI-37 84 GAGACTGCTGCTA-3’) and PAC3 (5’-CTGCTGCTACTGTTCCTAGAACAG-3’), according to the method of Kato et al. [14]. 2.9. Nucleotide sequences of promoter regions of’ the virulence factor genes 3. Results and discussion 3. I. Expression levels of various virulence genes in strains Xc and XclOOL Western blot analyses revealed that the amounts of PAc, glucosyltransferase-I and glucosyltransferase-SI produced by strain XclOOL were lower than the amounts of those produced by strain Xc (Fig. lA,B), whereas the amounts of glucosyltransferaseS and fructosyltransferase produced by strain XclOOL were higher than the amounts of these two proteins produced by strain Xc (Fig. lC,D). The amounts of these virulence factors produced by strain Xc were almost the same as the amounts of these factors produced by strains MT8148, T8 and UA130 (Fig. IA-D). Total RNA preparations from strains Xc and XclOOL were subjected to Northern blot analysis. The differences in the levels of production of the virulence factors between strain Xc and Table 2 Primers used for PCR amplification of the DNA fragments containing the promoter Gene Primer Sequence regions of the gtfB, gtfC, gtfD and frf genes Size Sequence of the determined fragment (bp) tbo) @fB gcfc g[fD fif @B-F 5’-TGTAAAACGACGGCCAGTTCACTTAAAGATCTACAG-3’ gtfB-R 5’.CAGGAAACAGCTATGACCGCCACCCGAAAGTGATGTT-3’ gtfC-F S-TGTAAAACGACGGCCAGTAGAACGAGTTCGGATTAA-3’ gtfC-R 5’-CAGGAAACAGCTATGACCACTTCCTGAAAGAGAGGTC-3’ gtfDF 5’.TGTAAAACGACGGCCAGTCAGGTTTATGGCGG-3’ @D-R S’CAGGAAACAGCTATGACCAGAAGCGACAGCAAC-3’ ftf-F 5’-TGTAAAACGACGGCCAGTGGACAGACTCTGAAA-3’ ftf-R 5’CAGGAAACAGCTATGACCAGTCAGGATAGCAGTC3’ The sequences of -2lM13 and Ml 3RP1 primers are underlined 619 445 355 195 439 320 460 286 Downloaded from http://femsle.oxfordjournals.org/ by guest on March 6, 2016 The I S-kb HindIII-Spel fragments containing the 1.4-kb upstream region of the pat gene were obtained from chromosomal DNA of strains Xc and XclOOL using a marker rescue method [15]. The 236bp nucleotide sequences between the initiation codon of the pat gene and the termination codon of the preceding open reading frame were determined for each strain using the Taq DyeDeoxy@’ Terminator Cycle Sequencing kit (Applied Biosystems) with the rescued fragment and synthetic primers, pat-F (5’GAATGCTGATGGACATCAATGG-3’) for the forward orientation and pat-R (5’-CTAGAACAGCACCACACAGTGT-3’) for the reverse orientation. The fragments containing the promoter sequences of other virulence factor genes of strains Xc and XclOOL were amplified by PCR using chromosomal DNA of strain Xc or XclOOL and each set of primers that possess the -21 Ml3 or M13RPl primer sequence at the 5’-terminus (Table 2). The nucleotide sequences of the region between the initiation codon of the gtfB, gtfC or ftf gene and the termination codon of its preceding open reading frame, and the 343-bp nucleotide sequence upstream of the initiation codon of the gtfD gene were determined for strains Xc and XclOOL using the Taq Dye Primer Cycle Sequencing Core kit (Applied Biosysterns) with the respective amplified PCR fragments and fluorescence-labeled -2lM13 or M13RPI primer (Applied Biosystems). Y Yamashita et al. IFEMS Microbiology kDa A 12 3 4 5 219124- ; -_ kb 12 12 12 12 1.4 5.3 w@ 1.0- B-~tf~&~stz_.ei_ 12 12 12 12 Fig. 2. Comparison of expression levels of virulence genes in strain Xc with those in strain XclOOL. Panel A shows Northern blot patterns of total mRNA (3 pg) from strains Xc (lane 1) and XclOOL (lane 2). Hybridization was carried out with the DIG-labeled PCR probes: probe P for the pat gene, probe I for the gtfB and gtfC genes, probe S for the gtfD gene and probe F for the ftf gene. Panel B shows total mRNA transferred to membranes prior to hybridization. Molecular mass standards (in kb) are noted on the left. between strain Xc and strain XclOOL might result from differences in the transcriptional activity of each virulence gene. C 219. 3.2. Comparison of the nucleotide sequences of the promoter regions of virulence genes 124- Fig. 1. Western blot analyses of virulence factors produced by various strains of S. mutans. Panels A-D represent the results obtained using rabbit anti-PAc, anti-glucosyltransferase-I, antiglucosyltransferase-S and anti-fructosyltransferase sera, respectively. Lanes 1-5 are for S. mutam strains Xc, XcloOL, MT8148, UA130 and T8, respectively. Molecular mass standards (in kDa) are noted on the left. It is possible that multiple changes in the levels of expression of the virulence genes in strain XclOOL might be due to mutations in the promoter regions of the virulence genes. To test this possibility, we compared the nucleotide sequences of the promoter regions of the genes of strain XclOOL with those of strain Xc. The transcription start sites of the four polysaccharide-synthesis enzyme genes and the -10 and -35 sequences for each transcript were deduced as recently reported by Smorawinska and Kuramitsu [ 161. They concluded that each virulence gene has its Downloaded from http://femsle.oxfordjournals.org/ by guest on March 6, 2016 strain XclOOL, which were detected by Western blot analysis (Fig. l), reflected the differences in the amounts of mRNA specific for each virulence factor gene (Fig. 2). There was no difference between the growth rates of strains Xc and Xc 1OOL (data not shown), suggesting that a mutation(s) in strain XclOOL had no effect on general physiological characteristics such as the growth rate. No reports comparing the levels of expression of virulence genes in S. mutans have yet been published. Therefore the transcriptional activity of the virulence genes in strains Xc and XclOOL were quantitatively estimated from the level of CAT-specific activity in a series of transformants carrying the cat gene fused with the virulence genes. The transcriptional activities of the virulence genes varied in strain Xc. The levels of expression of the pat, gffD and ff genes in strain Xc were almost the same, but they were significantly lower than those of the gtfB and gtfC genes (Fig. 3). Moreover, these results indicated that the phenotypic differences in virulence factors 85 Letters 144 (1996) 8137 Y Yumashitu et ul. IFEMS 86 Microbiology 81-87 200 the entire sequences of the promoter regions of the five virulence genes, suggesting that the phenotypic differences of S. mutans strain Xc and strain XclOOL were not caused by mutation(s) of promoter sequences of virulence genes and their flanking regions. Further work is needed to identify factor(s) affecting the levels of transcription of the multiple virulence genes in S. mutans. 100 Acknowledgments g 400 S k k #J 300 3 S 5 Letters 144 (1996) :s 1 0 pat gtP sF g@ Pf Fig. 3. Expression of various virulence genes in strains Xc and XclOOL. The ievels of CAT-specific activity in fusion derivatives from strains Xc and XclOOL, which carry the cur gene fused with the pat, gffB, gtfC, gffD or fj”gene, were used to quantitate the levels of transcription of each the genes in both strains. Each value represents the mean with the standard deviation of three independent experiments. This work was supported in part by a Grant-inAid for Scientific Research (B) 07557134 from the Ministry of Education, Science, Sports and Culture of Japan and by the Mochida Memorial Foundation for Medical and Pharmaceutical Research. We thank Howard K. Kuramitsu for providing the clones carrying the gtfD and ftf genes. References own promoter in the region immediately upstream of each structural gene [16]. The promoter region of the pat gene was identified in the present study. By Northern blot analysis, PAc-specific mRNA was found to be around 5.0 kb in size which corresponds to the size of the pm gene, suggesting that the promoter of the pm gene is located in the region immediately upstream of the pat gene. For identification of the transcriptional start site of the pat gene, primer extension analysis of mRNA prepared from strain Xc was carried out. The results of the present study indicate that transcription is initiated at a single G 49 bp upstream of the initiation codon of the pat gene (data not shown). From this finding, typical E. co/i-like promoter sequences, a -35 promoter sequence, TTGACA, and a -10 promoter sequence, TACAAT, were deduced. The nucleotide sequences of the promoter regions of the four virulence genes (gtfB, gtfC, gtfD and ftj) of strains Xc and XclOOL were determined using synthetic primers (Table 2). Those of the pat gene of both strains were determined using rescued fragments and synthetic primers, pat-F and pat-R. No base change was observed between strains Xc and XclOOL, not only in the promoter sequences but in [I] Loesche, W.J. (1986) Role of Streptococcus mutans in human dental decay. Microbial. Rev. 50, 353-380. [2] Hamada, S. and Slade, H.D. (1980) Biology, immunology, and cariogenicity of Streptococcus mutans. Microbial. Rev. 44. 331-384. [3] Koga, T., Yamashita. Y., Nakano, Y., Kawasaki, M., Oho, T., Yu, H., Nakai, M. and Okahashi, N. (1995) Surface proteins of Streptococcus mutans. In: Genetics of Streptococci, Enterococci and Lactococci (Ferretti, J.J., Gilmore, MS., Klaenhammer, T.R. and Brown, F., Eds.), Dev. Biol. Stand. Base1 85, 363-369. 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