BIOLOGY 2/2A Lab: Selective Breeding and Dihybridization Introduction: For the last 20,000 years, human civilization has benefited greatly from the application of selective breeding/artificial selection principles to agriculture, silviculture and animal husbandry. In artificial selection, various desired phenotypes are obtained by choosing which animals/plants should be mated such that the combination of their genetic information will produce progeny with said phenotype. However, the differences that exist between phenotype and genotype can make this a challenging pursuit. In this simulation, you will represent a farmer/animal breeder with the goal of producing a line of plants/animals that will be pure-breeding for a specific combination of traits. To obtain this pure-breeding line, you will need to make selective crosses of parental stock and progeny/offspring to obtain a population that only produces the phenotypes in question. Use dihybrid Punnett squares to assist you in this process. The Scenario: 1. You will be asked to produce one of the three following combinations of phenotypes. The alleles for each combination of traits are listed below. Species Traits Appaloosa Horses Balinese Pigs Vermeer Tulips Mane Color Dominant Allele Black (B) Recessive Allele White (b) Desired Phenotypes Black Coat Pattern Bristle Length Coat Color Coronal Pattern Spotted (S) Long (L) Copper (C) One color (O) No spots (s) Short (l) Dark Brown (c) Multicolor (o) Spotted Long Dark Brown Multicolor Petal width Narrow (N) Wide (n) Wide In other words, if you are a horse breeder, you want to produce a herd of horses that has a black mane and spotted coats and will always produce spotted foals with black manes. If you are a pig breeder, you want dark brown pigs with long bristles. If you are breeding tulips, you want tulips with wide, multicolored petals. 2. On your desk you should have a card with the genotype of your original parent and its sex. Write the phenotype of this parent on the other side of the card. YOU MAY SHOW ONLY THE PHENOTYPE OF YOUR PARENT (NOT ITS GENOTYPE) TO PROSPECTIVE MATES. 3. Circulate around the room looking for prospective mates. Obviously, they need to be the same species and the opposite sex. You may only see their phenotype so choose your mates carefully. You may not be able to produce offspring with both desired traits in the first cross, but you may be able to obtain the proper alleles, so consider carefully which phenotypes may carry which alleles. 4. When you have found a suitable mate for the first cross, sit down and reveal your genotype to your mate. Perform a dihybrid cross for these traits using the Punnett Square below. When you have combined all of the possible gamete combinations, analyze the resulting progeny by listing a phenotypic ratio for this F1 generation. Your Phenotype: _______ & ________ Mate‟s Phenotype: _________ & _______ Your Genotype: ________ Mate‟s Genotype: __________ Your Gametes: ____, ____, ____, _____ (place on top of columns in Punnett square) Mate‟s Gametes: ____, ____, ____, _____ (place on sides of rows in Punnett square) Phenotypic Ratio (dom/dom, dom/rec, rec/dom, rec/rec): ______:_____:_____:______ 5. When you have finished with your first cross, select one of your offspring from the F1 generation and write its genotype on a blank slip of paper. Write the phenotype on the opposite side. Assume the sex of this chosen offspring is the same as the original parent. As before, you may only show this individual’s phenotype to prospective mates. 6. Recirculate and find a new mate. Remember that ultimately you want to produce sixteen progeny that ALL have the same phenotype and that will always have the same phenotype in successive generations. Once you have found a suitable mate, perform another cross and analyze the offspring as before for this F2 Generation Your Phenotype: _______ & ________ Mate‟s Phenotype: _________ & _______ Your Genotype: ________ Mate‟s Genotype: __________ Your Gametes: ____, ____, ____, ___ (place on top of columns in Punnett square) Mate‟s Gametes: ___, ____, ____, _____ (place on sides of rows in Punnett square) Phenotypic Ratio (dom/dom, dom/rec, rec/dom, rec/rec): ______:_____:_____:______ 6. Were ALL sixteen of your offspring phenotypically and genotypically identical? Did every individual display BOTH of the desired traits? If your answer to both questions is true, proceed to the analysis questions section of this lab and have your Punnett squares checked by your instructor. If you cannot answer “yes” to BOTH of these questions, you need to continue with step 7. 7. Repeat this process by selecting another offspring from your F2 generation (above), making a phenotype/genotype label with your second blank and assigning the proper sex. Find a suitable mate and perform the F3 cross. Your Phenotype: _______ & ________ Mate‟s Phenotype: _________ & _______ Your Genotype: ________ Mate‟s Genotype: __________ Your Gametes: ____, ____, ____, ___ (place on top of columns in Punnett square) Mate‟s Gametes: ____, ____, ____, _____ (place on sides of rows in Punnett square) Phenotypic Ratio (dom/dom, dom/rec, rec/dom, rec/rec): _____:_____:_____:______ 8. Were all of your offspring identical (phenotypically and genotypically)? Did every individual display BOTH of the desired traits? If both are true, proceed to the analysis questions section of this lab and have your Punnett square checked by your instructor. If you cannot answer “yes” to BOTH of these questions at this point, you need to continue with your artificial selection. If you cannot finish during the course of this period, select offspring from your F3 and continue the dihybridization process until you reach the point where all sixteen have the correct phenotypic combination and are all homozygous for these traits. Attach your additional work to this lab. ANALYSIS QUESTIONS: 1. Why did it take most breeders more than one cross to produce a “pure breeding” group with both of the desired traits? Use the proper genotypic terminology in your answer. 2. Read the section in Chapter 11 about incomplete dominance. Do you think this process of producing a pure-breeding group would have been easier or more difficult if both of the traits had been incompletely dominant? Why? In your answer, explain what incomplete dominance is and how it would have affected this process. 3. What do the results of this lab suggest about the concept of “ethnic cleansing” (i.e. killing or sterilizing individuals showing a particular trait) to remove various human phenotypic traits associated with certain ethnic groups? Why is such a practice doomed to fail? 4. Look at the definition of artificial selection in the introduction and then look up the term “natural selection” in your text. How do you suppose the process of natural selection differs from the artificial selection modeled in this lab? Which process most likely takes a longer time? Why? 5. Suppose one population of Appaloosa were isolated on a barrier island of the coast of North Carolina such that they could not naturally breed with other horse populations. How might you expect their populations to change differently than populations that are not isolated? 6. Why does the establishment of “pure breeding lines” not guarantee that the offspring will show the same traits as the parental generation? 7. All physiological differences aside, why can‟t Appaloosa horses and Balinese Pigs produce viable offspring (i.e. offspring that can survive and reproduce)? Explain in terms of the chromosomal content of each species. 8. Crowned Lemurs, Black Rats and Grevy‟s Zebras all have 46 chromosomes? Once again, all physiological differences and ethical concerns aside, why can‟t humans be „hybridized‟ with these species? Explain in terms of homologous chromosomes.