Applied Statistical Methods HSRP 734 Summer 2008 Homework 6 Due: 7/31/2008 General instructions: 1) you may discuss any and all portions of the assignment with other members of the class. However, the homework you turn in must be your own. 2) For problems that require a statistical package, you can use any statistical software, but must do your own programming. 3) A final answer is not sufficient. Show all your work. Please provide relevant SAS output with clearly indicated answers to the questions. Q1. For a dataset with: t = time to death X1 = age – continuous variable X2 = race: 0 - white, 1 - other X3 = treatment group: 0 – standard drug, 1 – experimental drug X4 = prognosis group: 0 – poor prognosis, 1 – fair prognosis, 2 – good prognosis Q1a. State the form(i.e. formula) of the hazard function when fitting a Cox proportional hazards model for time to death adjust for age, race, treatment group, and prognosis group. Q1b. State the form of the hazard function when fitting a stratified model that stratifies on prognosis adjusted for age, race, and treatment group assuming no interaction between prognosis and any predictors. Q1c. State the form of the hazard function when fitting a stratified model that stratifies on prognosis adjusted for age, race, and treatment group assuming an interaction between prognosis and treatment group but no other interactions. Q1d. For the model in c, what is the formula for the hazard ratio for the effect of treatment group (experimental drug to standard) adjusted for the other variables? Does this formula give a different hazard ratio for different prognosis groups? Why? Q2. Use the SAS dataset hw5data from the class website to answer the following questions. This dataset is the same as the one for homework 5 Q2a. Fit a stratified model that stratifies on diagnosis adjusted for M/F, age, bone marrow transfer type, diagnosis and ferritin level assuming no interaction between diagnosis and any predictors. What is the effect of ferritin level on the risk of death adjusted for the other variables? Q2b. Fit a stratified model that stratifies on diagnosis adjusted for M/F, age, bone marrow transfer type, diagnosis and ferritin level assuming an interaction between diagnosis and ferritin level but no other interactions. Is the effect of ferritin level different in the two diagnosis groups? Why or why not? Q2c. Whether the interaction term in the model from b was significant or not, use the model in b to give the hazard ratio for a unit increase in ferritin level in AML patients and the hazard ratio for a unit increase in ferritin level in patients with a diagnosis of ‘other’.