BIOLOGY: BREAKING THE CODE Name_____________________ Date________________Per.___ I. REPLICATION For each of the three DNA sequences below, write the sequence of the complementary strand of DNA that results after replication. DNA molecule #1: T A C C G G A T G C C A G A T C A A A T C Complementary DNA #1_________________________________________________________ DNA molecule #2: T A C G G G G G C G T A A C C CA A C T Complementary DNA #2_________________________________________________________ DNA molecule #3: T A C C T G T T A G C T A C A A A A T T Complementary DNA #3_________________________________________________________ II. TRANSCRIPTION For each of the same DNA sequences below, write the sequence of messenger RNA (mRNA) codons that is synthesized during transcription. Be sure to separate the codons into triplets. DNA molecule #1: T A C C G G A T G C C A G A T C A A A T C mRNA #1 _____________________________________________________________ DNA molecule #2: T A C G G G G G C G T A A C C A C A A C T mRNA #2______________________________________________________________ DNA molecule #3: T A C C T G T T A A G C T A C A A A A T T mRNA #3______________________________________________________________ III.TRANSLATION For each of the mRNA codon sequences you have written from II., determine the sequence of transfer RNA (tRNA) anticodons that match it. mRNA #1 __________________________________________________________ Anticodons for mRNA #1: _________________________________________________________ mRNA #2__________________________________________________________________ Anticodons for mRNA #2: _________________________________________________________ mRNA #3__________________________________________________________ Using the chart or circle, write the amino acid sequence coded for by each mRNA. (Note: The code is based on mRNA codons, not tRNA anticodons.) Polypeptide #1: _________________________________________________________________ Polypeptide #2: _________________________________________________________________ Polypeptide #3: _________________________________________________________________ Vocabulary: Replication - Synthesis of an identical copy of a DNA strand. Transcription - Synthesis of mRNA molecule. (codon) Translation - Synthesis of polypeptides (amino acids/peptide bonds) from tRNA/ amino acids/ (anticodons) Codon - Base triplet on mRNA. Anticodon - Complementary triplet on tRNA. Polypeptide - Protein molecule Procedure: Protein synthesis = a "fairy tale." Fairy Tale: Title=__________________________________________________________ "Once upon a time there were two fraternal twin brothers: Donald N. Armstrong and Ronald N. Armstrong. Donald was the larger of the two, and he was a successful inventor with many patents. Although Ronald was not as big as his brother, he was extremely loyal. One day Donald came up with an idea for a solar powered car. Given the ever-present possibility of energy shortage, an efficient solar powered car would be in great demand. However, Donald really didn't want to leave his comfortable estate. He certainly couldn't take a chance by using e-mail or a fax to send his plans to the factory. They might be stolen by industrial spies! Or messed up in some way…. Donald knows his loyal brother would do anything for him, so he asks him to be a messenger and carry the plans to the factory. At the factory, the assembly line is set up and factory workers bring the parts to assemble the prototype. The car proves to be enormously successful. The Armstrong brothers buy an even bigger estate and live happily ever after!" Relate each part of the story to the corresponding component of the process of protein synthesis: Donald: DNA____________________ Ronald: _______________________ estate: ________________________ plans: _________________________ factory:__________________________ factory workers: ___________________ car:______________________________ 1. What are the 3 differences between DNA and RNA? 2. Explain the process of DNA replication. 3.Explain the process of transcription and mRNA codons. 4. Explain the process of translation and tRNA anticodons. 5. Explain how to use the chart and/or circle to determine polypeptide sequence from RNA codons. PROTEIN SYNTHESIS Name___________________ Date________________Per._____ Protein synthesis is a complex process. You will trace the steps that are involved in the protein synthesis of a part of a molecule of oxytocin. Oxytocin is the pituitary hormone that helps regulate blood pressure, stimulates the uterus to contract during childbirth, and stimulates the production of milk after childbirth. A. Protein synthesis begins with DNA in the nucleus. Below is a DNA sequence that could code for part of a molecule of oxytocin. Write the sequence of messenger RNA (mRNA) codons that would result from the transcription of this portion of DNA . The arrow marks the starting point (Nucleus) DNA ACA - ATA - TAG - CTT - TTG - ACG - GGG - AAC - CCC - ATT 1 2 3 4 5 6 7 8 9 10 TRANSCRIPTION: 1 2 3 4 5 6 7 8 9 10 mRNA: (Codon) UGU – UAU_______________________________________________________ B. After transcription (in nucleus), mRNA attaches to a START: Intiator Codon (AUG) ribosome where translation (in cytoplasm ) takes place. Each codon of mRNA bonds with an anticodon of a transfer RNA (tRNA) and each tRNA molecule bonds with a specific amino acid. The table below shows the mRNA codons and the amino acids for which they code. For example, if you were given the codon AGA, you can see from the table that these bases code for the amino acid arginine. STOP: terminator Codon (UAA,UAG,UGA) 1. UGU 2. UAU AUG: Methionine (start) 3. 4. 5. 6. 7. 8 9. 10. Use the mRNA sequence from A to write the sequence (1 –10) of amino acids in this part of the oxytocin molecule. TRANSLATION (Cytoplasm) on Ribosomes 1 2 - 3 Cysteine - Tyrosine _______________________________________________________________________________________ _______________________________________________________________________________________ 1. How many amino acids make up this portion of the oxytocin molecule? ___________________________ 2. What is the purpose of the UAA codon? ____________________________________________________ C. In order to get another view of the entire process of protein synthesis, label the structures on the diagram below. (ribosome (rRNA), mRNA [codon=3 bases], tRNA [anticodon=3 bases], protein, DNA To complete the chart below, give the name and a brief description of each step in protein synthesis that occurs in the part of the cell shown in the diagram above. PART OF CELL Name of Protein Synthesis Process Description Nucleus ribosome cytoplasm NOW PUT IT ALL TOGETHER: RNA MAUFACTURE AND USE IN THE CELL: Color Code and label 1. In the following diagram: LABEL: messenger RNA (mRNA), transfer RNA (tRNA), ribosomal RNA (rRNA), amino acid, Codon, anti-codon and fill in the correct BASES: (A,G, C, U) R I B O S O M E 2. Where would the PEPTIDE BONDS be located? (Color code GREEN) 3. Four different kinds of amino acids are represented in the diagram by different shaped labeled a, b, c and d. Study the diagram and decide whether the next two places along the chain will be filled by any of these amino acids or by still other kinds. DRAW AND LABEL THE NEXT two amino acids, using new shapes and letters if necessary.