Dynamic Light Scattering Version 1.07. Last Edit 24 January 2011, Richard Kingston. Introduction! 3 Relevant Physical Theory and Models of Scattering! 4 Data Collection! 6 Cell Cleaning.! 6 Sample preparation! 8 Routine Data Collection.! 9 Checking for scattering from the buffer alone! 13 Make measurements from a protein dilution series. And replicate !!!! 14 Correcting to standard conditions! 15 Thermal unfolding experiments using the Event Scheduler.! 15 Exporting data from Dynamics! 16 Data Analysis! 16 Measurement of Solution properties.! 17 Measuring solution density.! 18 Measuring solution viscosity! 20 Measuring solution refractive index.! 22 Appendix A: Refractive Index (831.1 nm), Dynamic Viscosity, and Density of Pure Water, as a Function of Temperature (Atmospheric Pressure)! 26 Appendix B: Calculating the density of air.! 38 Introduction These brief notes describe how to obtain good quality DLS data using the Wyatt DynaPro Titan. Soon they will describe how to analyze that data too !! Unfortunately, there are not very many reviews of Dynamic Light Scattering that are accessible to biologists. Hence these notes will eventually be expanded to include the relevant physical background ... as time permits. Relevant Physical Theory and Models of Scattering Very briefly for now ... The DLS Instrument measures the intensity autocorrelation function (ACF) of light scattered from a solution. This can be analyzed to yield information about the translational diffusion of the light scattering species, and hence molecular size. If there is a single scattering species present in solution and the usual conditions are satisfied (e.g. non-interacting, basically “spherical” particles, much smaller than the wavelength of the light being used to probe them) then the normalized intensity ACF G(τ) is described by ... 1 where α is an instrument constant, DT is the translational diffusion coefficient and q is the length of the scattering vector, given by 2 where n is the refractive index of the buffer, λ is the wavelength of the incident light, and θ is the scattering angle. Non-linear least squares fitting of G(τ) can provide estimates of the translational diffusion coefficient. The translational diffusion coefficient DT can be related to the hydrodynamic radius RH (the radius of the hard sphere which would diffuse at the same rate as the particle) via the Stokes-Einstein relationship ... 3 where kB is the Boltzmann constant, and η the dynamic viscosity of the buffer. If the light scattering particles are not a single size but instead exhibit some size distribution (they are polydisperse, in the usual terminology of DLS), then things get more difficult. You cannot recover a size distribution from the intensity autocorrelation function measured in DLS, without making some additional assumptions (the problem is mathematically ill-conditioned). Fortunately there are still some useful ways to proceed ... The Method of Cumulants was introduced by Dennis Koppel (Koppel D.E. (1972) J. Chem. Phys. 57, 4814-4820) and can be used to recover the mean Diffusion coefficient and its variance. It does not require any assumptions about the nature of the underlying particle size distribution. The Cumulants analysis preformed by the Dynamics software is a slight variant of this method. The %Polydispersity, reported by the Dynamics package is the (estimated variance / estimated mean ) x 100. However if the underlying distribution function is complicated (for example ... if it is not monomodal) then the results of the Method of Cumulants may not be very informative. Dynamics also implements a Regularization method, which attempts to recover the particle size distributions from the ACF, imposing restraints on the smoothness of the distributions to make the process converge. This method is not very well-documented and it is difficult to assess its general reliability. Data Collection Cell Cleaning. It is important to keep the cells used for DLS meticulously clean. These are the count rates (photons per second) that the DynaPro Titan instrument was giving when new. No Cell / 100% Laser Power ~2800 Empty Cell / 100% Laser Power ~7000 Water filled Cell / 100% LaserPower ~50000 These are with the original, Wyatt supplied cell. If you are getting much higher count rates than these, the cell may need cleaning. Mild Cleaning 1. Wash the cell with water /acetone and dry 2. Immerse the cell in a 1% solution of LA2 detergent (~50 mls in a Pyrex beaker) 3. Heat the solution to ~ 70 °C, and let the cell soak for a few minutes 4. Wash the cell with water /acetone and dry. Acid Cleaning 1. Prepare a 3:1 (vol:vol) mixture of concentrated Sulfuric and Nitric acid (Caution dispense Sulfuric and Nitric acid in a fumehood using gloves and eye protection). 2. Put the cuvette into a small glass beaker. 3. Fill to the top with the Sulfuric/Nitric acid mixture using a glass Pasteur pipette. 4. Stopper the cuvette, and invert to mix. 5. Leave to sit for 1 hour - overnight. 6. Cautiously (!) empty the cuvette, rinse several times. 7. Finish by washing copiously with H2O using the cuvette washer. See Manske et al. A LESS HAZARDOUS CHROMIC-ACID SUBSTITUTE FOR CLEANING GLASSWARE. Journal of Chemical Education (1990) vol. 67 (11) pp. A280-A282 Sample preparation The active volume of the DLS cell is 15 µL. In practice you need 20 µL to fill the cell without difficulty, and 40-50 µL if you’re going to centrifuge your samples and draw liquid from the top of the spun material. The required protein concentrations depend strongly on the size of the protein. Here’s a rough guide ... Hydrodynamic radius Appropriate protein concentration 1 nm 300-1000 µM 2-3 nm 100-600 µM 10 nm 1-10 µM For quantitative work it’s important to characterize light scattering as a function of protein concentration ... see below. It is critical that your sample be free of dust and other particulate matter. You should filter your sample then subject it to a high speed spin in a benchtop centrifuge. For filtration of small volumes we generally use Microcentrifuge Spin Filters (Millipore UltraFree-MC with a 0.1- 0.2 µM pore size). Following filtration we spin the sample at high speed in a Benchtop centrifuge (e.g. 30 mins @ 16400 rpm in an Eppendorf 5417R centrifuge). Sample Loading Loading the sample into the cell is best achieved with a micropipette and a gel load ing tip. The thin tip will fit inside the optical cell and can be gradually withdrawn as you fill the cell with liquid. Be careful not to introduce bubbles. If you do, these can usually be dislodged by gently (!) tapping the base of the cuvette on a solid surface. Routine Data Collection. Switching on • • • • Turn on the DLS (both units) and the associated computer. Log in and start the Dynamics Software, using the Desktop Link. Select File -> New Establish a connection to the DLS Instrument. Setting parameters On the left of the data collection window is a panel which allows you to set some parameters. Nothing in the Hardware node is configurable. What you need to check are the instrument parameters. Set the Temperature to the value your require. The target temperature is reported on the bottom left of the MicroSampler, while the actual temperature is reported on the top left. Transfer your sample into the cuvette and place it in the instrument. After reaching the target temperature, allow 5 minutes equilibration before beginning data collection. You also need to pay attention to the ... Acquisition time: For small, well-behaved, proteins acquisition times of 1-2s will be sufficient to observe the complete decay of the intensity correlation function. 5s should be a universally safe value. What you require is that the ACF decays to a stable baseline before you stop measuring it. The minimum acquisition time is 1s. The Number of Acquisitions is what it says ... the number of intensity correlation functions that will be acquired. The Laser power is adjustable, and you need to set it to an appropriate value. With your sample in place, open the instrument control panel. The Counts per Second will be continuously reported. You should adjust the laser intensity so that you are getting no more than 800 000 counts/sec. According to Wyatt, this ensures that the photon counter in the DynaPro Titan is responding linearly. The other parameters are important for Wyatt’s data analysis procedures, and will influence the numbers it produces, but will not influence how the data is collected. Collecting data At this point you can hit start and data will be collected. Every time you hit start you begin what Wyatt terms a “Measurement”. You will accumulate individual Intensity autocorrelation functions, which Wyatt terms “Acquisitions”, until you hit stop. The Wyatt software averages the Acquisitions within a single measurement - outputting a single averaged ACF and a single set of fit model parameters. Although there’s no way to access the individual ACFs within a measurement through the Wyatt software, they are still present within the output “.exp” file and we can access them with lab software. So the distinction between “Measurements” and “Acquisitions” may or may not matter, depending on your purpose. Often it’s useful to use the Events Scheduler to automate data collection. This allows control of the instrument using a simple scripting language. Here’s an example, which shows how to use the Events Scheduler to collect 500 measurements, with a single Acquisition in each Measurement. • With the Parameters node highlighted, right click with the mouse. This will add the “Event Schedule” node. Highlight it. • Add a “Do” Event, and enter a value for the number of ACF’s you want to measure (e.g. 500) • Add a “Collect Acquisitions” Event. Enter the associated value (e.g. 1) • Add a “Loop” event, creating a Do loop. When you’re done it should look like this Now when you press start, the event scheduler will take over, and you will make the specified number of measurements 500, each containing only a single acquisition. Like this (only hopefully your data will look a bit better !!!) Regardless of how you collect data, once you are done you should save it (File->Save) For convenience you can save your Event Schedule and other settings (File-> Save Presets). You can then quickly load these before commencing each data collection (File->Load Presets). How Much data? To get really good size estimates you will need more data than you might think. 5001000 intensity correlation functions would not be excessive ... particularly for small proteins (< 20 kDa) and lower protein concentrations Note that with an acquisition times of 1-2s this only requires 15-30 minutes of instrument time. Checking for scattering from the buffer alone DLS data analysis will be greatly complicated if the buffer appreciably scatters light . You should check for light scattering by the buffer ... particularly if you are including co-solvents to stabilize or unfold your protein, or detergents to keep it in solution. In the ideal case, random intensity correlation functions will be obtained, resembling those from pure water. If the buffers you are using do scatter light, then it may be possible to take care of that during data analysis ... but it will require thinking. Make measurements from a protein dilution series. And replicate !!! A dilution series is an important part of any quantitative DLS study. Properly, estimates of the translational diffusion coefficient - or the Hydrodynamic radius - need to be linearly extrapolated to infinite protein dilution. Replication is also an important part of a quantitative DLS study. This means more than simply collecting a large number of ACFs on a single sample. The entire dilution series needs to be performed in triplicate, preferably in randomized order. This is because physical placement of the cuvette in the instrument, and cuvette cleaning, are both significant sources of variation in the measurements. For a small monomeric proteins, 5-10 kDa, you’ll probably want to begin with a concentration of 500 - 2000 µM. The nature of the dilutions is dictated by the volumes you can accurately pipette. Make sure your pipettes are calibrated. Probably 10 µL is about the smallest you want to go. A series like this would be a good start ... 1. 20 µL protein solution 2. 20 µL protein solution + 10 µL sample buffer (0.67x orig concn) 3. 10 µL protein solution + 10 µL sample buffer (0.50x orig concn) 4. 10 µL protein solution + 20 µL sample buffer (0.33x orig concn) 5. 10 µL protein solution + 30 µL sample buffer (0.25x orig concn) 6. 10 µL protein solution + 70 µL sample buffer (0.13x orig concn) The sample buffer you use for the dilutions must also be filtered and spun. Correcting to standard conditions When reporting diffusion coefficients, values are usually corrected to standard conditions (water as a solvent, 20 °C). Here’s how we make that correction (Noting that 20 °C =293.15 K) : hbuffer,Tb Dwater,Tw = Tw D Tb hwater,Tw buffer,Tb hbuffer,Tb Dwater,293.15 = 293.15 D Tb 1.002 # 10 -3 buffer,Tb Here Dbuffer,Tb is your measured diffusion coefficient. Tb is the temperature at which you made your measurements (in Kelvin !) and is ηbuffer,Tb is the dynamic viscosity of your buffer at temperature Tb. For discussion see Biophysical Chemistry Part II by Cantor & Schimmel (eqn 10.67, page 584), or Physical Biochemistry by Van Holde (eqn 5.20, pg 117). Thermal unfolding experiments using the Event Scheduler. To be completed. Data Analysis with Local software Exporting data from Dynamics Our lab software now analyzes the Wyatt “.exp” file directly so there is no need to export into any other format. Data Analysis To be completed. (It’s all writtenM in the highest quality Fortran 90 (!!) Some familiarity with the Unix Command Line is required). Measurement of Solution properties. Quantitative DLS studies require that the density, viscosity and refractive index of your buffer are all reliably known. For some buffers you can approximate using the values for pure water (see the Appendix). But this will not always be sufficient ... particularly if you are performing a chemical titration in which some additive (e.g. TMAO or Glycerol) markedly alters these properties. Measuring solution density. The easiest way to measure solution density is to use a modern digital density meter employing the oscillating U-tube technique (e.g. those manufactured by Anton Paar). Unfortunately we don’t have such an instrument, so for now we have to do it the oldschool way. In simplified overview: We weigh a vessel when empty, and when filled with pure water. Since the density of water is known with great accuracy, we can calculate the volume of the vessel. If we then repeat these measurements using our solution of interest, we can then calculate its density using the known volume of the vessel. Essentiallywe are using water as a reference fluid to calibrate the vessel. If the vessel is transferred into a water bath, and allowed to come to thermal equilibrium after filling then we can make density measurements at different temperatures. The basic procedure is laid out nicely in Schiel & Hage (2005). Density measurements are best done using specialist glassware as a vessel - Guy-Lussac specific gravity bottles. However we can make do with an ordinary volumetric flask in a pinch. It sounds relatively simple - but for high precision measurements we need to make buoyancy corrections to account for the weight of the air being displaced. Let’s consider the first case, after we have weighed the vessel when empty, and when filled with water (in replicate !!!!). The mean difference between these two sets of measurements is the observed weight of water Wwater/observed which is related to the true weight of water Wwater/true (as would be measured in a vacuum), by the following expression. Wwater/true = Wwater/observed c 1 - tair tair -1 mc 1 m tref twater Here, ρair, ρwater, and ρref, are the densities of air, water, and the weights used to calibrate the balance, respectively. See Battino and Williamson (1984) for discussion ρair is ~ 1.2 kg/m3 at room temperature. The exact value can be readily calculated given the temperature, atmospheric pressure and relative humidity (see Appendix). ρwater is ~ 1000 kg/m3 at room temperature. The exact value can be looked up in a table (see Appendix). As for ρref, according to Sartorius, the CPA225D mass balance we have in the lab was calibrated using weights with density 7.95 g/cm3 = 7950 kg/m3. We will neglect any change in their density as a function of temperature. Assuming you have obtained the true weight of water in the vessel, the volume of the vessel can be simply calculated V = Wwater/true / ρwater . Now finally, if we make replicate measurements on the vessel filled with buffer, and subtract the weight of the empty vessel, we get Wbuffer/observed. As before ... Wbuffer/true = Wbuffer/observed c 1 - tair tair -1 mc 1 m tref tbuffer Now noting that V = Wbuffer/true / ρbuffer , if we combine these expressions and rearrange, we get the required formula for ρbuffer, involving only known quantities. Wbuffer/observed c 1 tbuffer = V tair m tref + tair Sweet ! There is a spreadsheet available to take the labor out of performing these calculations. References Battino and Williamson. Single-pan balances, buoyancy, and gravity or "a mass of confusion". Journal of Chemical Education (1984) vol. 61 (1) pp. 51-52 Schiel, J.E. and Hage, D.S. Density measurements of potassium phosphate buffer from 4 to 45 degrees C. Talanta (2005) vol. 65 (2) pp. 495-500 Measuring solution viscosity We use a Cannon-Ubbelohde Viscometer ... a capillary action viscometer which allows you to estimate the kinematic viscosity of a buffer by measuring the efflux time through a capillary, under the action of gravity. You need a large volume of buffer (~50 mls) to make these measurements. The manufacturer’s instructions are good, and if followed, will yield reliable measurements (see following page). You need to make 3-4 measurements and average them. Because we don’t have a controlled temperature bath for the viscometer, you’ll need to make measurements in a temperaturecontrolled room (e.g. Room 480B ... 18 °C). From the efflux time you can calculate the kinematic viscosity as follows kinematic viscosity (mm2/s) = efflux time (s) x viscometer constant (mm2/s2) The constant is different for every viscometer- for ours (Number 50 B805) the value is 0.004474 mm2/s2 Note that the dynamic viscosity (kg m-1 s -1) required for light scattering applications, is calculated from the kinematic viscosity (m2 s-1) through multiplication by the solution density (kg m-3). (Watch the units ... 1 mm2 s-1 = 10-6 m2 s-1). It’s a good idea to make some measurements on water to make sure your technique is good. The main difficulty is in cleaning and drying the viscometer following use. This can be achieved by draining the viscometer; rinsing with water; rinsing with acetone; and finally pumping dry air through the viscometer to evaporate the residual acetone (There is a dry air unit for this purpose in room 464). Instructions for the use of The Cannon-Ubbelohde Viscometer See also ASTM D 445, D 446, ISO 3104 and ISO 3105 1. Clean the viscometer using suitable solvents, and by passing clean, dry, filtered air through the instrument to remove the final traces of solvents. Periodically, traces of organic deposits should be removed with chromic acid or non-chromium cleaning solution. 2. If there is a possibility of lint, dust, or other solid material in the liquid sample, filter the sample through a fritted glass filter or fine mesh screen. 3. Charge the viscometer by pouring enough sample through tube L to fill the lower reservoir until the liquid meniscus is between the minimum and maximum fill lines marked on the reservoir. 4. Place the viscometer into the holder and insert it into the constant temperature bath. Vertically align the viscometer in the bath if a selfaligning holder has not been used. 5. Allow approximately 20 minutes for the sample to come to the bath temperature. 6. Seal the branching vent tube M with a finger or stopper and apply suction to tube N until the liquid reaches the center of bulb D. Remove suction from tube N. Remove seal from vent tube M, and immediately seal tube N until the sample drops away from the lower end of the capillary R into bulb B. Then remove seal and measure the efflux time. 7. To measure the efflux time, allow the liquid sample to flow freely down past mark E, measuring the time for the meniscus to pass from mark E to mark F to the nearest 0.1 second or 0.01 second. 8. Calculate the kinematic viscosity of the sample by multiplying the efflux time by the viscometer constant. 9. Without recharging the viscometer, make check determinations by repeating steps 6 to 8. The combined expanded1 uncertainty with 95% confidence of the calibration measurements relative to the primary standard is as follows: Range of Constants 2 2 mm /s RECOMMENDED VISCOSITY RANGES FOR THE CANNON-UBBELOHDE VISCOMETERS Size 25 50 75 100 150 200 300 350 400 450 500 600 650 700 Kinematic Viscosity Range mm 2/s, (cSt) mm 2/s 2, (cSt/s) 0.002 0.004 0.008 0.015 0.035 0.1 0.25 0.5 1.2 2.5 8 20 45 100 0.5 0.8 1.6 3 7 20 50 100 240 500 1600 4000 9000 20000 to 2 to 4 to 8 to 15 to 35 to 100 to 250 to 500 to 1200 to 2500 to 8000 to 20000 to 45000 to 100000 <0.025 0.025-0.25 0.25-2.5 2.5-25 >25 Expanded Combined Uncertainty 0.16% 0.22% 0.29% 0.38% 0.44% The assigned uncertainty of the primary viscosity standard at 20°C is ±0.17%. See ISO 3666. 1 An expanded uncertainty U is determined by multiplying the combined standard uncertainty uc by a coverage factor k: U = k uc where k = 2. See NIST Technical Note 1297, 1994 edition, Guidelines for evaluation and Expressing the Uncertainty of NIST Measurement Results THIS PRODUCT WAS CALIBRATED WITHIN A QUALITY SYSTEM WHICH IS REGISTERED TO ISO 9002. CANNON INSTRUMENT CO. P10.0118 2139 HIGH TECH ROAD ©2002 STATE COLLEGE, PA. 16804 0702 Measuring solution refractive index. The laser in the DynaPro Titan operates at 831.1 nm. The solution refractive index at this wavelength can be measured using the Schmidt & Haensch Digital Multiple Wavelength Refractometer (DSR λ) located in Room 464, For Physics Types ... this is a critical angle refractometer. The DSR λ refractometer has 4 programmable methods. Method 1 (the default when you start the instrument) will measure the refractive index at a fixed temperature (default 18 °C) and at wavelengths of 496.30, 588.20, 650.50, 755.25, 827.40 and 910.90 nm. It outputs the refractive index at nine user selectable wavelengths within this range, based on a polynomial interpolation of the actual measurements. One of these wavelengths is 831.1 nm - the wavelength of the laser in the Dynapro Titan DLS instrument. Condensed Operating Instructions for the DSR λ 1. Turn on the electronic control unit (back right) 2. Check that the indicator on top of the desiccant cartridge (to the left of the sample chamber) is completely blue. If it’s pink, don’t use the instrument. You need to regenerate the zeolite beads by removing them from the cartridge, and heating them in an oven for 1 hour at 275 °C. After repacking them and replacing the cartridge, the indicator should turn blue. See page 7 of the User Manual for details 3. After the instrument finishes initializing, the top line of the display should read “Method METHOD1”. If it doesn’t someone has been fiddling with the instrument defaults. 4. Open the cover to the sample chamber and pipette your solution into the sample compartment. It should cover the prism surface. This will require > 0.3 mls of solution. The chamber holds ~ 7mls of solution when completely full. 5. Press 1 and set the temperature to that required ( default is 18 °C). The instrument can be operated between 9 and 81 °C. If the ambient temperature in the lab gets too warm, the manufacturer advises that the inbuilt Peltier device may struggle to maintain 9 °C - but we haven’t yet had any problems. 6. Wait until the temperature has stabilized. The actual temperature is shown at bottom left; the set temperature is shown at bottom right. This will take a few minutes. Once the temperature is set, wait an additional 5 minutes before making measurements. 7. Hit start to measure the solution refractive index. A table of refractive index versus wavelength will result. At the moment, you will have to record these values manually - there is no electronic output or interface with a computer. You can display the data in graphical form by pressing the (←) key. 8. Repeat at least once. There will probably be variation in the last decimal place. 9. Switch off the instrument. 10. Remove the sample from the chamber. Rinse with distilled water and gently wipe dry with a KimWipe. Controls are good: Measurements on water Here are the measured and “calculated” values for deionized water @ 18 °C, obtained in Sept 2008. Without much special effort you should be able to obtain 3DP accuracy. Actually ... we should be able to do better than this ... investigation is ongoing. Measured Calculated* 490.0 1.33711 1.33747 546.1 1.33469 1.33500 589.3 1.33322 1.33352 630.0 1.33204 1.33235 690.0 1.33055 1.33090 750.0 1.32927 1.32968 831.1 1.32780 1.32825 860.0 1.32734 1.32777 910.0 1.32659 1.32698 *See the Appendix for details If you can’t reproduce at least this, the sample chamber isn’t clean, the water isn’t deionized, or the instrument needs calibration (in rough order of likelihood). A note on making measurements at elevated temperatures: When making measurements on solutions above 40 °C, solution evaporation becomes a problem, as there is a large dead air volume in the refractometer sample chamber. Using the minimal volume required to cover the prism surface is not a good idea in this case, as significant volume evaporation will occur. However using very large volumes is also sub optimal, as the Peltier unit will be extremely slow to shift temperature. The best solution is to set the empty sample chamber to the required temperature and to heat the solution to the required temperature in an external heat block or water bath. Obviously the solution should be in a tightly capped vessel during this step. Then rapidly transfer 1-2 mls of the solution into the refractometer sample chamber. It will quickly come to equilibrium, and refractive index measurements can be made before significant evaporation has occurred. Appendix A: Refractive Index (831.1 nm), Dynamic Viscosity, and Density of Pure Water, as a Function of Temperature (Atmospheric Pressure) A1. Density of pure water at atmospheric pressure was calculated using the basic expression of Kell (1975). The coefficients in Kell’s expression were slightly revised by Bettin & Spieweck (1990). See Batista & Paton (2007) for an English language commentary. References: Kell, G.S. Density, thermal expansivity, and compressibility of liquid water from 0 degrees to 150 degrees C - Correlations and tables for atmospheric-pressure and saturation reviewed and expressed on 1968 temperature scale. J Chem Eng Data (1975) vol. 20 (1) pp. 97-105 Batista, E. and Paton, R. The selection of water property formulae for volume and flow calibration. Metrologia (2007) vol. 44 (6) pp. 453-463. Bettin H and Spieweck F Die Dichte des Wassers als Funktion der Temperatur nach Einführung der Internationalen Temperaturskala von 1990. (1990) PTB Mitt. 100 195–6 Temperature (°C) Density (kg m-3) 0.00 999.8395 1.00 999.8986 2.00 999.9399 3.00 999.9642 4.00 999.9720 5.00 999.9638 6.00 999.9401 7.00 999.9014 8.00 999.8481 9.00 999.7807 10.00 999.6994 11.00 999.6048 12.00 999.4971 13.00 999.3767 14.00 999.2439 Temperature (°C) Density (kg m-3) 15.00 999.0991 16.00 998.9424 17.00 998.7742 18.00 998.5948 19.00 998.4043 20.00 998.2031 21.00 997.9914 22.00 997.7693 23.00 997.5372 24.00 997.2951 25.00 997.0433 26.00 996.7820 27.00 996.5114 28.00 996.2315 29.00 995.9427 30.00 995.6450 31.00 995.3386 32.00 995.0237 33.00 994.7003 34.00 994.3686 35.00 994.0288 36.00 993.6810 37.00 993.3253 38.00 992.9618 39.00 992.5906 40.00 992.2119 41.00 991.8257 42.00 991.4321 43.00 991.0313 Temperature (°C) Density (kg m-3) 44.00 990.6234 45.00 990.2084 46.00 989.7864 47.00 989.3575 48.00 988.9219 49.00 988.4795 50.00 988.0304 51.00 987.5748 52.00 987.1128 53.00 986.6443 54.00 986.1694 55.00 985.6883 56.00 985.2010 57.00 984.7075 58.00 984.2079 59.00 983.7024 60.00 983.1908 61.00 982.6734 62.00 982.1501 63.00 981.6209 64.00 981.0861 65.00 980.5456 66.00 979.9994 67.00 979.4476 68.00 978.8902 69.00 978.3274 70.00 977.7591 71.00 977.1854 72.00 976.6063 Temperature (°C) Density (kg m-3) 73.00 976.0219 74.00 975.4322 75.00 974.8372 76.00 974.2370 77.00 973.6316 78.00 973.0210 79.00 972.4054 80.00 971.7847 81.00 971.1589 82.00 970.5281 83.00 969.8923 84.00 969.2515 85.00 968.6058 86.00 967.9552 87.00 967.2997 88.00 966.6394 89.00 965.9742 90.00 965.3043 91.00 964.6295 92.00 963.9500 93.00 963.2658 94.00 962.5768 95.00 961.8831 96.00 961.1848 97.00 960.4818 98.00 959.7741 99.00 959.0618 100.00 958.3449 A2. Dynamic viscosity of pure water at atmospheric pressure was calculated using equation 16 of Batista and Paton (2007). The form of this expression is originally due to Kestin, Sokolov & Wakeham (1978) References: Batista, E. and Paton, R. The selection of water property formulae for volume and flow calibration. Metrologia (2007) vol. 44 (6) pp. 453-463. Kestin, J. et al. Viscosity of liquid water in the range -8 °C to 150 °C. J Phys Chem Ref Data (1978) vol. 7 pp. 941 Temperature (°C) Dynamic Viscosity (Pa.s = kg.m-1.s-1) 0.00 1.79064E-03 1.00 1.73088E-03 2.00 1.67410E-03 3.00 1.62012E-03 4.00 1.56877E-03 5.00 1.51988E-03 6.00 1.47331E-03 7.00 1.42892E-03 8.00 1.38659E-03 9.00 1.34618E-03 10.00 1.30760E-03 11.00 1.27073E-03 12.00 1.23548E-03 13.00 1.20176E-03 14.00 1.16948E-03 15.00 1.13857E-03 16.00 1.10894E-03 17.00 1.08053E-03 18.00 1.05328E-03 19.00 1.02712E-03 Temperature (°C) Dynamic Viscosity (Pa.s = kg.m-1.s-1) 20.00 1.00200E-03 21.00 9.77859E-04 22.00 9.54649E-04 23.00 9.32322E-04 24.00 9.10835E-04 25.00 8.90145E-04 26.00 8.70212E-04 27.00 8.51000E-04 28.00 8.32473E-04 29.00 8.14598E-04 30.00 7.97344E-04 31.00 7.80682E-04 32.00 7.64583E-04 33.00 7.49023E-04 34.00 7.33976E-04 35.00 7.19419E-04 36.00 7.05330E-04 37.00 6.91688E-04 38.00 6.78473E-04 39.00 6.65667E-04 40.00 6.53252E-04 41.00 6.41211E-04 42.00 6.29529E-04 43.00 6.18191E-04 44.00 6.07183E-04 45.00 5.96490E-04 46.00 5.86101E-04 47.00 5.76004E-04 Temperature (°C) Dynamic Viscosity (Pa.s = kg.m-1.s-1) 48.00 5.66186E-04 49.00 5.56637E-04 50.00 5.47348E-04 51.00 5.38307E-04 52.00 5.29506E-04 53.00 5.20936E-04 54.00 5.12589E-04 55.00 5.04457E-04 56.00 4.96532E-04 57.00 4.88807E-04 58.00 4.81276E-04 59.00 4.73932E-04 60.00 4.66768E-04 61.00 4.59780E-04 62.00 4.52961E-04 63.00 4.46307E-04 64.00 4.39812E-04 65.00 4.33471E-04 66.00 4.27282E-04 67.00 4.21238E-04 68.00 4.15336E-04 69.00 4.09572E-04 70.00 4.03942E-04 71.00 3.98444E-04 72.00 3.93074E-04 73.00 3.87828E-04 74.00 3.82704E-04 75.00 3.77699E-04 Temperature (°C) Dynamic Viscosity (Pa.s = kg.m-1.s-1) 76.00 3.72811E-04 77.00 3.68036E-04 78.00 3.63373E-04 79.00 3.58819E-04 80.00 3.54373E-04 81.00 3.50031E-04 82.00 3.45793E-04 83.00 3.41656E-04 84.00 3.37620E-04 85.00 3.33681E-04 A2. Refractive index of pure water (831.1 nm) at atmospheric pressure was calculated using an expression due to Schiebener et al (1990). The coefficients of this expression have been revised subsequent to this paper - see the IAPWS release cited below. Note that the density of water appears, which appears in the expression for the refractive index, was calculated as detailed above. References: P. Schiebener, J. Straub, J.M.H. Levelt Sengers and J.S. Gallagher, J. Phys. Chem. Ref. Data 19, 677, (1990). The International Association for the Properties of Water and Steam: Release on the Refractive Index of Ordinary Water Substance as a Function of Wavelength, Temperature and Pressure (1997). Temperature (°C) Refractive index @ 831.1 nm 0.00 1.32902 1.00 1.32902 2.00 1.32901 3.00 1.32900 4.00 1.32898 5.00 1.32895 6.00 1.32893 7.00 1.32889 8.00 1.32885 9.00 1.32881 10.00 1.32876 11.00 1.32871 12.00 1.32866 13.00 1.32860 14.00 1.32854 15.00 1.32847 16.00 1.32840 17.00 1.32832 Temperature (°C) Refractive index @ 831.1 nm 18.00 1.32825 19.00 1.32816 20.00 1.32808 21.00 1.32799 22.00 1.32790 23.00 1.32780 24.00 1.32771 25.00 1.32760 26.00 1.32750 27.00 1.32739 28.00 1.32728 29.00 1.32717 30.00 1.32705 31.00 1.32693 32.00 1.32681 33.00 1.32669 34.00 1.32656 35.00 1.32643 36.00 1.32630 37.00 1.32617 38.00 1.32603 39.00 1.32589 40.00 1.32575 41.00 1.32561 42.00 1.32546 43.00 1.32531 44.00 1.32516 45.00 1.32501 Temperature (°C) Refractive index @ 831.1 nm 46.00 1.32485 47.00 1.32469 48.00 1.32453 49.00 1.32437 50.00 1.32421 51.00 1.32404 52.00 1.32387 53.00 1.32370 54.00 1.32353 55.00 1.32336 56.00 1.32318 57.00 1.32300 58.00 1.32282 59.00 1.32264 60.00 1.32246 61.00 1.32227 62.00 1.32208 63.00 1.32189 64.00 1.32170 65.00 1.32151 66.00 1.32131 67.00 1.32112 68.00 1.32092 69.00 1.32072 70.00 1.32051 71.00 1.32031 72.00 1.32011 73.00 1.31990 Temperature (°C) Refractive index @ 831.1 nm 74.00 1.31969 75.00 1.31948 76.00 1.31927 77.00 1.31905 78.00 1.31884 79.00 1.31862 80.00 1.31840 81.00 1.31818 82.00 1.31796 83.00 1.31774 84.00 1.31751 85.00 1.31728 86.00 1.31705 87.00 1.31682 88.00 1.31659 89.00 1.31636 90.00 1.31613 91.00 1.31589 92.00 1.31565 93.00 1.31541 94.00 1.31517 95.00 1.31493 96.00 1.31469 97.00 1.31444 98.00 1.31420 99.00 1.31395 100.00 1.31370 Appendix B: Calculating the density of air. Air has a density around 1.2 kg/m3 but the exact value depends on the amount of water it’s carrying. In order to calculate the exact value, we assume you have measured the usual variables: Temperature (°C), Relative Humidity (%) and Atmospheric Pressure (mbar = hPa). We have a Digital Barometer which can make all three measurements. Note the following simple unit conversions P (kPa) = 10-1 x P (hPa) T (K) = 273.15 + T (°C) Next we calculate the Saturation Vapor Pressure, PSAT, of water (in kPa) from the Temperature. There’s a huge number of different empirical equations to do this. We’ll use the very simple expression of Bolton (1980) 17.67T PSAT = 0.6112 exp ( T + 243.5 ) In this formula T is specified in °C. Bolton’s formula is pretty accurate up to 30°C. Hopefully the mass balance isn’t in a room hotter than this !!! Then we can calculate the actual Vapor Pressure, PV, of water (in kPa) from PSAT and the Relative Humidity (RH). By definition ... PV = PSAT # RH 100 Now that the vapor pressure of water is known, we can calculate the vapor pressure of dry air, PD, in kPa from the total (= atmospheric) pressure, P. P = PV + PD Finally we can obtain calculate the density of air, ρair, (in kg/m3) as a mixture of ideal gases (water vapor and dry air) tair = PV # 10 3 PD # 10 3 RV T + RD T where RV = 461.495 J.kg-1.K-1, is the specific gas constant for water vapor and RD = 287.058 J.kg-1.K-1, is the specific gas constant for dry air (are these the “best” values for the gas constants ? ... who can say) Reference Bolton, D., The computation of equivalent potential temperature, Monthly Weather Review, 108, 1046-1053, 1980