2005-03-03220C Moore (revised) SUPPLEMENTARY INFORMATION Protection of macaques from vaginal SHIV challenge by vaginally delivered inhibitors of virus-cell fusion Ronald S. Veazey (1), Per Johan Klasse (2), Susan M. Schader (2), Qinxue Hu (3), Thomas J. Ketas (2), Min Lu (4), Preston A. Marx (1), Jason Dufour (1), Richard J. Colonno (5), Robin J. Shattock (3), Martin S. Springer (6), John P. Moore (2, #) Supplementary Information Synergy between entry inhibitors in vitro To evaluate the suitability of CMPD167, BMS-378806 and C52L for use in combination, we tested them in pairs against SHIV-162P3 infection of Tzm.bl cells and HIV-1BaL infection of MDM1,2. Tzm-bl (formerly JC-53.bl) cells are derived from the HeLa epithelial cell line. They express CD4 and CCR5 as transfected genes, and contain inducible luciferase and ß-gal genes under the control of the HIV-1 LTR1. Inhibitors were titrated alone and in combination at fixed ratios. The approximately monotonous zone of 10-99% inhibition was analyzed using the Calcusyn algorithm (Biosoft, Cambridge, UK). Although the experimental variation was greater in the studies of SHIV-162P3 infection of Tzm.bl cells than of HIV-1BaL infection of MDM, both experimental systems generated the same pattern of results. Thus, combining BMS-378806 with CMPD167 lead to approximately additive inhibition, whereas combinations of C52L with either CMPD167 or BMS-378806 tended more towards synergistic inhibition (Supplementary Table 1). These observations are consistent with other reports of synergy between different classes of entry inhibitors, particularly those involving T-20, a peptide with the same mechanism of action as C52L3,4. Vaginal challenges with SHIV-162P4 We performed pilot studies using low concentrations of CMPD167 or C52L and the SHIV-162P4 virus before switching to SHIV-162P3 to permit cross-comparison of our results with those being generated by others5. The SHIV-162P4 stock was cultured at the Tulane National Primate Research Center using seed virus provided by Cecelia Cheng-Meyer (Rockefeller University); it infected 17/18 control animals (94%). 2 Vaginally administered CMPD167 at 1mM was not protective against SHIV-162P4, as only 2/16 animals remained uninfected in published and subsequent experiments6. In contrast, C52L was partially protective when delivered vaginally in the range 0.050.5mM, with 4/10 animals remaining uninfected (p = 0.041, compared to control) (Supplementary Fig.1). Plasma VL in SHIV-162P3-infected animals We compared plasma VL in the 9 control animals and in 13 that became infected with SHIV-162P3 despite receiving inhibitors vaginally. The VL profiles in individual animals varied (the error bars show the SD within the groups), but the mean values in the control and inhibitor-treated animals were not significantly different at any time point (Supplementary Fig.2). There were no significant differences between mean VL peak, time to reach the peak, or Area Under the Curve (AUC) for the two groups as compared by Student’s t test (Excel, Microsoft): peak height, 6.4 ± 0.44 log10 RNA copies/ml for controls vs 6.3 ± 0.53 log10 RNA copies/ml for inhibitor-treated; peak time, 20 ± 5.5 days vs 19 ± 4.2 days; AUC for days 7-42, 155 ± 13 vs 156 ± 24, p > 0.35. (The AUC of the plot of log VL as a function of time was calculated by Prism (Graphpad)). This finding suggests that any initial effect of the vaginally delivered inhibitors on reducing the number of virus particles that are successfully transmitted across the vaginal mucosa is insignificant after viral amplification takes place within lymphoid tissues. An analogy might be to the lack of relationship between inoculum size and the outcome of infection when macaques are infected with SIV strains that, like SHIV-162P3, use CCR5 for entry7. 3 Supplementary references 1. Wei, X. et al. Emergence of resistant human immunodeficiency virus type 1 in patients receiving fusion inhibitor (T-20) monotherapy. Antimicrob. Agents Chemother. 46, 18961905 (2002). 2. Hu, Q. et al. Blockade of attachment and fusion receptors inhibits HIV-1 infection of human cervical tissue. J. Exp. Med. 199, 1065-1075 (2004). 3. Tremblay, C. Effects of HIV-1 entry inhibitors in combination. Curr. Pharm. Des. 10, 1861-1865 (2004). 4. Reeves, J.D. et al. Sensitivity of HIV-1 to entry inhibitors correlates with envelope/coreceptor affinity, receptor density, and fusion kinetics. Proc. Natl. Acad. Sci. USA 99, 16249-16254 (2002). 5. Lederman, M.M. et al. Prevention of vaginal SHIV transmission in rhesus macaques through inhibition of CCR5. Science 306, 485-487 (2004). 6. Veazey, R.S. et al. Use of a small-molecule CCR5 inhibitor in macaques to treat simian immunodeficiency virus infection and prevent simian-human immunodeficiency virus infection. J. Exp. Med. 198, 1551-1562 (2003). 7. Igarashi, T. et al. Early control of highly pathogenic simian immunodeficiency virus/human immunodeficiency virus chimeric virus infections in rhesus monkeys usually results in long-lasting asymptomatic clinical outcomes. J. Virol. 77, 10829-10840 (2003). 4 Legends for Supplementary Figures Supplementary Fig.1 Challenge studies with SHIV-162P4. Each symbol represents a single macaque, grouped by infection status post-challenge with SHIV-162P4. Control animals (triangles), inhibitor-treated animals (diamonds). All animals received HMC gel (pH 7.0), containing or lacking inhibitors, except for those denoted by yellow bordered-symbols (PBS use). Eleven of the animals receiving CMPD167 (1mM) have been previously described; of them, 2 were uninfected6. Supplementary Fig.2 Plasma VL in SHIV-162P3-infected animals. The mean VL values (log10 RNA copies per ml of plasma, ± standard deviation) are plotted for the first 42 days post challenge. The 9 infected control animals (red circles) are compared with 13 infected animals that had received vaginally delivered inhibitors (blue squares). A dashed green line at log10(125) RNA copies per ml indicates the limit of sensitivity of the VL assay. 5 Supplementary Table 1. Combination indices (CI)1 at 50, 75 and 90% effective doses (ED) for inhibitor combinations in vitro Virus and cells Compounds ED50 ED75 ED90 (molar ratio) HIV-1 BaL CMPD167 + 0.96 ± 0.055 1.0 ± 0.065 1.1 ± 0.065 Macrophages BMS-378806 (1/10) CMPD167 + 0.47 ± 0.010 0.50 ± 0.045 0.58 ± 0.075 C52L (1/5) BMS-378806 + 0.56 ± 0.050 0.64 ± 0.050 0.73 ± 0.050 C52L (2/1) SHIV-162P3 CMPD167 + 1.4 ± 0.38 1.2 ± 0.25 1.1 ± 0.23 Tzm-b1 cells BMS-378806 (1/90) CMPD167 + 0.74 ± 0.15 0.57 ± 0.094 0.47 ± 0.079 C52L (1/3.2) BMS-378806 + 0.83 ± 0.23 0.56 ± 0.050 0.41 ± 0.10 C52L (3.3/1) 1 CI < 1 indicates synergy, = 1 additivity, > 1 antagonism. The formula used applies to mutually exclusive inhibitors: CIEDx=[((D1)comb/(D1))+ ((D2)comb/(D2))], where (D1) and (D2) are the concentrations of the respective drug on its own needed to achieve X % inhibition; (D1)comb and (D2)comb are the respective concentrations of the two drugs, when used in combination, needed to give the same level of inhibition. The CI values given are the means ± SD of 2-3 experiments. The r-values for describing the degree of fit to the dose-effect equation in Calcusyn were > 0.95. 6