Mapping and Sanger sequencing

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Mapping and Sanger sequencing
Reviews
Green ED (2001) Strategies for the Sequencing of Complex Genomes. Nature Reviews
Genetics 2: 573 PMID: 11483982
Meyers BC, Scalabrin S, Morgante M (2004) Mapping and Sequencing Complex Genomes:
Let’s Get Physical!. Nature Reviews Genetics 5: 578 PMID: 15266340
Original papers
Olson MV et al. (1986) Random-clone strategy for genomic restriction mapping in yeast.
PNAS 83: 7826. PMID: 3463999
Coulson A, et al. (1986) Toward a physical map of the genome of the nematode
Caenorhabditis elegans. PNAS 83:7821-5. PMID: 16593771
Did Venter sequence the human genome by WGS?
Waterston RH, Lander ES, Sulston JE (2002) “Nope.” PNAS 99: 3712-16.
Green P (2002) “Right, he didn’t.” PNAS 99: 4143-4
Myers EW Sutton GG Smith HO Adams MC Venter JC (2002) “Did too!” PNAS 99: 4145-6
Waterston RH, Lander ES, Sulston JE (2003) “Did not!” PNAS 100: 3022-3
Myers EW Sutton GG Smith HO Adams MC Venter JC (2002) “Yes we did!” PNAS 100:
3025-6
NextGen sequencing
Reviews
Metzker ML (2010) Sequencing Technologies—The Next Generation. Nature Reviews
Genetics 11: 31 PMID: 19997069
Mardis ER. (2008) Next-generation DNA sequencing methods. Annu Rev Genomics Hum
Genet. 2008;9:387-402.
Hobert O (2010) The Impact of Whole Genome Sequencing on Model System Genetics:
Get Ready for the Ride. GENETICS 2010 184: 317–319 PMID: 20103786
Gupta PK. (2008) Single-molecule DNA sequencing technologies for future genomics
research. Trends Biotechnol. 26:602-11.
Deamer D. (2010) Nanopore Analysis of Nucleic Acids Bound to Exonucleases and
Polymerases. Ann. Rev. Biophys. 2010.39:79-90 PMID: 20192777
Original papers
Blumenstiel JP et al. (2009) Identification of EMS-Induced Mutations in Drosophila
melanogaster by Whole-Genome Sequencing
. GENETICS 2009 182: 25–32 PMID:
19307605
Clark MJ et al., (2010) U87MG Decoded: The Genomic Sequence of a Cytogenetically
Aberrant Human Cancer Cell Line. PLoS Genetics 6: e1000832
Wheeler DA et al., (2008) The complete genome of an individual by massively parallel DNA
sequencing. Nature 452: 872-876. PMID: 18421352
Johnson DS et al. (2007) Genome-wide mapping of in vivo protein-DNA interactions.
Science. 2007 316:1497-502. PMID: 17540862; Comment in: Science 316:1441-2.
Eid J et al. (2009) Real-Time DNA Sequencing from Single Polymerase Molecules Science
323: 133 PMID: 19023044
Astier Y, Braha O, Bayley H. (2006) Toward single molecule DNA sequencing: direct
identification of ribonucleoside and deoxyribonucleoside 5'-monophosphates by using an
engineered protein nanopore equipped with a molecular adapter. J Am Chem Soc.
128:1705-10. PMID: 16448145
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