Dana Giffen Temperate to Tropical: The Trouble with Using Temperate Aquatic Insect Analysis Methods in Costa Rica Abstract Reliable methods to characterize the biological integrity of tropical aquatic systems are important for conservation and research agendas. Aquatic insects live in streams for extended periods of time and are good indicators of long-term ecosystem health. However, almost all analysis methods for families of benthic macroinvertebrates have been developed for temperate streams, and these appear to have only limited applicability to tropical systems. This baseline study examined pH, hardness, alkalinity, canopy cover, substrate dynamics, fish populations, and the composition of aquatic insect populations in three headwater streams-the Jucó, the Grande, and the Chires-near Mastatal, Costa Rica. Three months prior to this study, the Lower Jucó experienced a poisoning event, so this ecosystem was compared to the undisturbed Upper Jucó. Results illustrated the uncertainties of using indexes developed for temperate freshwater systems to analyze tropical insect data. Seven indexes, primarily used in temperate waters were analyzed; the family biotic index (FBI), taxa richness, Ephemeroptera-Plecoptera-Trichoperta index (EPT), Shannon-Wiener diversity index, Simpson’s index, number of endemic taxa, and one newly created index specific for Costa Rican aquatic insects--the Springer index. It appears that some of these indexes may not be appropriate to assess tropical streams (Davis et al. 2003 and Deliz Quinones 2005). The indexes examined used variant tolerance values for different families, leading to inconsistent results based on the index employed. The family-specific indexes did the poorest job of reliably characterizing the streams, while generic diversity indexes produced less specific, but uniform results. Simpler indexes that were not family-specific, such as the Shannon-Wiener diversity index, taxa richness, and number of endemic families were subject to less uncertainty than results obtained from indexes like the Springer index, FBI, and EPT that lacked information about prevalent tropical insect families. This paper cautions researchers to use a variety of indexes to characterize tropical streams until more diagnostic studies are conducted to compare and modify these indexes.