Supplemental Information CD44 functions in Wnt signaling by regulating LRP6 localization and activation Mark Schmitt, Marit Metzger, Dietmar Gradl, Gary Davidson and Véronique Orian-Rousseau Figure S1: CD44 is required for activation of β-catenin in HCT cells and for cytoplasmic accumulation of β-catenin in HeLa cells. Figure S2: CD44 amplifies Wnt/β-catenin signaling independently of HA and HA binding to CD44 . Figure S3: rCD44v4-v7∆Cyt is expressed at the membrane and mutation of the ERM binding domain reduces CD44 mediated enhancement of Wnt signaling. Figure S4: CD44 augmentation of Wnt/β-catenin signaling is independent of RTK signaling via the MEK/Erk- and PI3K/Akt-pathways. Figure S5: The complex between CD44 and LRP6 occurs through the cytoplasmic domains and is dependent on the binding of CD44 to ERM proteins. Figure S6: xCD44-MO injected embryos show a musculature defect phenotype that can be rescued by hCD44s. 1 Fig. S1 CD44 is required for activation of β-catenin in HCT cells and for cytoplasmic accumulation of β-catenin in HeLa cells. A) HCT116 cells were transfected with control siRNA or siRNA against all CD44 isoforms and treated either with Co-CM or Wnt3a-CM for 3 hrs. Cells were subjected to WB analysis 72 hrs after siRNA transfection. Numbers indicate the fold intensity values of the active βcatenin bands normalized to the bands of total β-catenin. B) HeLa cells were transfected with control siRNA or siRNA against all CD44 isoforms for 72 hrs and treated either with Co-CM or Wnt3a-CM for 6 hrs. Afterwards, cells were lysed and subjected to subcellular fractionation. Cell fractions were analyzed by WB analysis. The relative purity of the membrane and cytosolic fractions was confirmed by sequential probing for the cytoplasmic protein Erk and the membrane protein CD44. Subcellular fractionation and WB analysis are described in “Materials and Methods”. Fig. S2 CD44 amplifies Wnt/β-catenin signaling independently of HA and HA binding to CD44 . A) HEK293 cells were transfected with TOPFlash and control TK-Renilla vectors together with an empty vector or a cDNA for hCD44s (75 ng). Following stimulation with Wnt3a-CM or Co-CM (20 hrs) in the presence or the absence of hyaluronidase (HAse, 50 U/ml) cells were lysed and subjected to luciferase measurements. In parallel, untreated or HAse treated HEK293 cells were stained with a biotinylated HA binding protein and Alexa488 coupled streptavidin. Representative pictures were taken using a Leica SP5 fluorescence microscope with a 63X objective (scale bar = 25 µm). B) HEK293 cells were transfected as in A). After stimulation with Wnt3a-CM or Co-CM (20 hrs) in the presence or absence of antibodies blocking the interaction between HA and CD44 (BU52) or IgG (3 µg/ml), cells were lysed and subjected to luciferase measurements. C) HEK293 cells were transfected with TOPFlash and control TK-Renilla vectors together with empty vector or 75 ng of cDNAs for hCD44s or hCD44s mutated in the HA binding domain (hCD44s-HAmut). After stimulation with Wnt3a2 CM or Co-CM (20 hrs) cells were lysed and subjected to luciferase measurements or in parallel to WB analysis. Reporter gene assays and WB analysis are described in “Materials and Methods”. All data represent mean +/- SD from at least 4 independent experiments performed in triplicates. Statistical significance was analyzed using the student´s t-test (*p< 0.05). Fig. S3 rCD44v4-v7∆Cyt is expressed at the membrane and mutation of the ERM binding domain reduces CD44 mediated enhancement of Wnt signaling. A) HEK293 cells were transfected with an empty vector or cDNA for rCD44v4-v7∆Cyt. 48 hrs later, cells were lysed and subjected to subcellular fractionation. Cell fractions were analyzed by WB analysis. The relative purity of the membrane and cytosolic fractions was confirmed by sequential probing for the cytoplasmic protein Erk and the membrane protein transferrin receptor. Subcellular fractionation and WB analysis are described in “Materials and Methods”. B) HEK293 cells were transfected with TOPFlash and control TK-Renilla vectors together with an empty vector or cDNAs for CD44s (75 ng) or CD44s mutated in the ERM binding domain (CD44s-ERMmut; 75 ng). After stimulation with Wnt3a-CM or Co-CM (20 hrs), cells were lysed and subjected to luciferase measurements or in parallel to WB analysis. All data represent mean +/- SD from at least 4 independent experiments performed in triplicates. Statistical significance was analyzed using the student´s t-test (*p< 0.05). Fig. S4 CD44 augmentation of Wnt/β-catenin signaling is independent of RTK signaling via the MEK/Erk- and PI3K/Akt-pathways. A) HEK293 cells were transfected with TOPFlash and control TK-Renilla vectors together with an empty vector or a cDNA for hCD44s (75 ng), treated either with DMSO or the MEKInhibitor U0126 (15 µM) 1 h prior to the addition of Co-CM or Wnt3a-CM. 20 hrs after induction, cells were lysed and subjected to luciferase measurements. B) HEK293 cells were transfected similar to A), treated either with DMSO or the PI3K-Inhibitor Ly294002 (50 µM) 1 h prior to the addition of Co-CM or Wnt3a-CM. 20 hrs after induction, cells were lysed and subjected to luciferase measurements. Reporter gene assays are described in “Materials and 3 Methods”. All data represent mean +/- SD from at least 4 independent experiments performed in triplicates. Statistical significance was analyzed using the student´s t-test (*p< 0.05). Fig. S5 The complex between CD44 and LRP6 occurs through the cytoplasmic domains and is dependent on the binding of CD44 to ERM proteins. A) HeLa cells were transfected with either empty vector or FLAG-tagged LRP6. 24 hrs after transfection cells were treated either with Co-CM or Wnt3a-CM for 30 minutes, lysed and FLAG-LRP6 proteins were immunoprecipitated with a FLAG-antibody. Immunoprecipitates were subjected to WB analysis with FLAG- and hCD44 antibodies. B) HeLa cells were transfected with cDNAs for CD44s or CD44s mutated in the ERM binding domain (CD44sERMmut) together with a FLAG-tagged LRP6 construct. 24 hrs after transfection cells were treated with Wnt3a-CM for 30 minutes, lysed and proteins were immunoprecipitated with an antibody against CD44. Immunoprecipitates were subjected to WB analysis using FLAG- and CD44 antibodies. C) HeLa cells were transfected with CD44-Cyt-GST or FLAG-LRP6∆E(1-4) alone or with CD44-Cyt-GST together with either empty vector or FLAG-LRP6∆E(1-4). 48 hrs later cells were lysed and lysates were subjected to GST-pulldown as described in “Materials and Methods”. The precipitates were subjected to WB analysis using antibodies against FLAG and GST. Fig.S6 xCD44-MO injected embryos show a musculature defect phenotype that can be rescued by hCD44s. Xenopus laevis embryos used for the in situ hybridization (Fig. 7b) were analyzed morphologically. Embryos were injected in the right blastomere at 2-cell stage either with Control-MO, xCD44-MO alone or xCD44-MO together with hCD44s expression vectors. FITC labeled Dextran was co-injected to assess the side of injection. Numbers indicate the amount of analyzed embryos. Percentage of embryos with musculature defects (indicated by an arrow) was quantified (histogram). Data represent mean +/- SD from at least 4 independent experiments. Numbers indicate the amount of analyzed embryos. Statistical significance was analyzed by the student´s t-test (*p< 0.05). 4