BIOL 130, Spring 2015 1 Energy Balance and Trophic Status in Fish: Intro to Excel Introduction This is a data set from this paper: D. A. Arrington, K. O. Winemiller, W. F. Loftus, and S. Akin. 2002. "How often do fishes 'run on empty'? Ecology 83 (8): 2145:2151. This study grew out of a similar one on lizards in which the proportion of animals with empty stomachs was used as an index of "instantaneous energy balance". In that study the researchers wanted to know whether lizards alternate between states of feast or famine in contrast to keeping a positive energy balance (which means they consume more energy than they use) all the time. Arrington et al. (2002) wanted to look at the energy balance question with animals with different feeding modes such as ones that eat insects vs. ones that eat other animals. They used fish in their study because these animals display a wide range of trophic (feeding) specializations. They measured the number of fish with empty stomachs in a very large data set - 36,875 individual fish of 254 species collected from Africa, South America, Central America, and North America. They only included samples with >10 individuals in the study; average sample size was 145. The researchers examined the relationship between "trophic status" (what an animal eats) and number of fish with empty stomachs. (Since they were looking at the feast vs, famine question, they were interested in fish with empty stomachs). They classified fish into 4 categories piscivores (carnivores that eat other fish), omnivores (eat everything), invertivores (eat invertebrate animals), and algivores/detritivores (eat algae and detritus). They also looked at reproductive behavior of the fish and found that within the piscivores a disproportionate number provided parental care (e.g. mouth brooding - the fish takes care of baby fish in its mouth! This certainly would limit what the fish could eat). Arrington et al. conclude that animals able to put surplus energy into lipids and other storages can tolerate the energy costs associated with high-cost reproduction and also survive stress periods. (Under which of the four feeding strategy would fish more likely be able to store fats? Which fish have "high-cost" feeding strategies). They state that their results "reveal a potential influence of feeding frequency and energy balance on life history evolution." BIOL 130, Spring 2015 Methods 1. Make an Excel graph by opening the data set in Excel: Go over the Excel spreadsheet to make sure you understand the headings, the terms, and the question that the scientists were asking. Next, highlight the columns from the words "Trophic Category" and Percent" down to the end of the numbers. To make this bar graph figure, go to the Insert tab and select “Column Chart”. 2. Now examine the figure to interpret the data. What are your conclusions? Is there anything more you would like to know? It’s pretty messy so we’ll clean it up. 3. First, we’ll sort the data and then copy and paste the data we need to another worksheet. 4. To sort the data, highlight the blank cell in the upper left of the spreadsheet – this should highlight all the data. 5. Choose the Data tab on the top of the spreadsheet, and choose Sort. (Data Sort). Sort by Trophic Category. This will put all the Algi/Detrivores together, as well as the other classes. 6. Copy the data for each Trophic Category into another worksheet, and give each Trophic Category its own column. 7. Now we can clean it up by calculating the average and the standard deviations for each class! 2 To calculate the average and standard deviations: = average(highlighted cells) = stdev(highlighted cells) 8. Make a graph of only the averages for each Trophic Category. We’ll use the standard deviations to give our graph error bars. Highlight all category labels and the averages. Click Insert column 2D Column 9. Make sure that the Chart is highlighted and click on Chart tools Layout. You’ll want to add some axis labels, especially on the y-axis. Click on Axis titles and add both a vertical and horizontal title. 10. To add error bars, click on a bar on the graph to highlight all the bars. Click on Error Bars on the same Layout tab. Go to “More error bar options” and choose Custom (all the way at the bottom). Highlight your calculated Standard Deviations in the worksheet for both positive and negative error bars! So, are there significant differences among the categories? Are some Trophic Categories hungrier than others? ANOVA After you have made a graph and visually inspected your variable of choice for the three trophic categories, you may want to determine if there are statistically significant differences between them. You can do this for one variable at a time (e.g. percent with empty stomachs) using a one-way Analysis of Variance (ANOVA). BIOL 130, Spring 2015 ANOVA is a type of statistical test that is often used to compare sample groups (when there are more than 2 categories*** see t-test when there is only 2 groups). ANOVA considers all of the variation that exists within your data set and determines how much of that variation can be explained by any grouping variables that you have identified. It then calculates the probability that you would observe a similar distribution of variation by chance alone (the P value). If that value is very small (i.e. < 0.05), it is likely that there are real differences among the groups that you identified. Excel has the capability to perform several types of ANOVA, the simplest of which is a one-way ANOVA. You can use a one-way ANOVA to see if there are differences in percent empty stomachs for each trophic category. To do an ANOVA, use the data with each Trophic Category in its own column. Note that the length of the four columns will be different; this is because there are different numbers of species in each group. Choose Data / Data Analysis / ANOVA: single factor from the menus. From the next menu, give the block that holds your data as the ‘Input range’ and check to make sure ‘columns’ is checked after ‘Grouped by:’. If your column labels are highlighted click the “Labels in First Row” box. Under ‘Output Options’ click ‘Output Range’ and indicate the upper left corner of an empty area of your spreadsheet for the range (this is where the results of the ANOVA will be put), and leave the other settings at their default values. The output from the ANOVA will include an F statistic and a P value. 3 A large value for F indicates that a large proportion of the variation in your data can be explained by the grouping variable (the Trophic Category). A small value for P indicates that it is very unlikely that you would see these differences among your groups by chance alone. Typically a P value < 0.05 is considered statistically significant, however it is important to remember that you are likely to see a difference of that magnitude 1 times in 20, even if there were no real differences among your groups. t-test*** T-tests are simplified versions of ANOVA - they are appropriate when you are comparing only 2 data categories, such as light versus dark, wet versus dry, etc. Again, t-tests compare the variation within the data to the variation between data groups. Excel can also do t-tests, but since they are simpler you have more choices of the tests to be done. Use t-test: paired 2 sample for means when you have paired samples (the same plant ) and you want to know if the average value of your collected data changed between 2 sampling periods. Use t-test: two-sample assuming equal variances when you don't have paired samples and you want to know if they are significantly different from each other. The equal variances part means that your data aren't all that noisy - you can tell by looking at the standard deviations. If both data sets have similar standard deviations (same magnitude) you can use this test. BIOL 130, Spring 2015 Use t-test: two-sample assuming unequal variances for a similar case to above, except your standard deviations are much different from each other. TODAY'S ASSIGNMENT Come up with another question based on these data. Tell me what it is, make the graph and do the analysis, and tell me what you found. You can email me the file (jschnurr@wells.edu)! 4