Identification of selective sweeps in closely related
populations of the house mouse based on
microsatellite scans
Meike Teschke, Odette Mukabayire, Thomas Wiehe and Diethard Tautz
Supplementary pictures
The supplement shows all 16 loci for which we have done a window analysis with
flanking microsatellites. The displays follow the schemes used in Fig. 1 and 2 in the
manuscript with slight modifications.
At the end of the file we have included the table with heterozygosities for all loci
typed.
Legend for diagrams 1 to 8 (loci from the French-German comparison)
upper left: lnRH values plotted along the chromosome (X-axis in bp)
charts: allele spectrum for each locus in the order along the chromosome; (X-axis
denotes allele length; Y-axis denotes frequency in population); light bars: France,
dark bars Germany; the chart labeled as “sweep” denotes the locus that showed the
initial sweep signature (X).
region 10C1 - significant in linked locus statistics
region 13A1 - significant in linked locus statistics
region 19C1 – not significant in linked locus statistics
region 1D – not significant in linked locus statistics
region 5E5 – not significant in linked locus statistics
region 15E3 –significant in linked locus statistics
region 14C1 –significant in linked locus statistics
region 9F2 –significant in linked locus statistics
Legend for diagrams 9 to 16 (loci from the Czech-Kazakh comparison)
upper left: lnRH values plotted along the chromosome (X-axis in bp)
charts: allele spectrum for each locus in the order along the chromosome; (X-axis
denotes allele length; Y-axis denotes frequency in population); light bars: Kazhakstan,
dark bars Czech Republik; the grey chart denotes the locus that showed the initial
sweep signature (X).
region 11B5 - significant in linked locus statistics
region 16C2 - not significant in linked locus statistics
region 17C1 - not significant in linked locus statistics
region 14B - significant in linked locus statistics
region 4B3 - significant in linked locus statistics
region 8A1.1 - not significant in linked locus statistics
region 8A4 - significant in linked locus statistics
region 4D3 - not significant in linked locus statistics
Supplementary Table:
Expected Heterozygosities corrected for sample size. Expected heterozygosity values of microsatellites typed along the chromosome, identified sweep loci are
marked in grey.