INRA Tsukuba TIL Joint Lab Seminar December 4, 2009 At Salle IVBM, INRA Bordeaux Participants: from University of Tsukuba, INRA and University of Bordeaux 9 h 00 Activities in Plant Sciences at Tsukuba University Tsuyoshi MIZOGUCHI Basic Plant Science (Vascular Plant) Kenji MIURA Basic Plant Science (Algae) Hiroshi EZURA Plant Biotechnology 10h 00 Pause café 10h 30 Seminar Satoshi TABATA, Kazusa DNA Res. Inst., Japan ”Structural analysis of gene-rich regions of the tomato genome” Kenji MIURA, Tsukuba University, Japan "Sumoylation in plant response to abiotic stresses" Dr. Satoshi TABATA Deputy Director Kazusa DNA Research Institute Kazusa-kamatari, Kisarazu, Chiba 292-0818 JAPAN http://www.kazusa.or.jp/en/plant/ Recent Representative Publication 1. Mueller, L., Tanksley, S., Giovannoni, J.J., Vaneck, J., Stack, S., Buels, R. A snapshot of the emerging tomato genome sequence. The Plant Genome. 2009 Jan: 2:78-92. 2. Asamizu E, Shimoda Y, Kouchi H, Tabata S, Sato S. A positive regulatory role for LjERF1 in the nodulation process is revealed by systematic analysis of nodule-associated transcription factors of Lotus japonicus. Plant Physiol. 2008 Aug 147, 2030–2040 3. Sato S, Nakamura Y, Kaneko T, Asamizu E, Kato T, Nakao M, Sasamoto S, Watanabe A, Ono A, Kawashima K, Fujishiro T, Katoh M, Kohara M, Kishida Y, Minami C, Nakayama S, Nakazaki N, Shimizu Y, Shinpo S, Takahashi C, Wada T, Yamada M, Ohmido N, Hayashi M, Fukui K, Baba T, Nakamichi T, Mori H, Tabata S. Genome Structure of the Legume, Lotus japonicus. DNA Res. 2008 Aug; 15(4):227-239 4. Hisano H, Sato S, Isobe S, Sasamoto S, Wada T, Matsuno A, Fujishiro T, Yamada M, Nakayama S, Nakamura Y, Watanabe S, Harada K, Tabata S. Characterization of the Soybean Genome Using EST-derived Microsatellite Markers. DNA Res. 2007 Dec 31;14(6): 271-81. 5. Sato S, Tabata S. Lotus japonicus as a platform for legume research. Curr Opin Plant Biol.2006 Apr;9(2):128-32. Dr. Kenji MIURA Assistant Professor Graduate School of Life and Environmental Sciences University of Tsukuba Gene Research Center, Tsukuba 305-8572, Japan http://www.gene.tsukuba.ac.jp/~kmiura/index-e.html Recent Representative Publication 1. Miura, K.*, Lee, J., Jin, J.B., Yoo, C.Y., Miura, T. & Hasegawa, P.M.* (2009) Sumoylation of ABI5 by Arabidopsis SUMO E3 ligase SIZ1 negatively regulates abscisic acid signaling. Proc. Natl. Acad. Sci. USA 106, 5418-5423. 2. Jin JB, Jin YH, Lee J, Miura K, Yoo CY, Kim WY, van Oosten M, Hyun Y, Somers DE, Lee I, Yun D-J, Bressan RA, Hasegawa PM (2008) The SUMO E3 ligase, AtSIZ1, regulates flowering by controlling a salicylic acid-mediated floral promotion pathway and through affects on FLC chromatin structure. Plant J. 53: 530-540. 3. Miura, K., Jin, J.B., & Hasegawa, P.M. (2007) Sumoylation, a post-translational regulatory process in plants. Curr. Opin. Plant Biol. 10, 495-502. 4. Miura, K., Jin, J.B., Lee, J., Yoo, C.Y., Stirm, V., Miura, T., Ashworth, E.N., Bressan, R.A., Yun, D.-J., & Hasegawa, P.M. (2007) SIZ1-mediated sumoylation of ICE1 controls CBF/DREB1 expression and freezing tolerance in Arabidopsis. Plant Cell 19, 1403-1414. 5. Miura, K., Rus, A., Sharkhuu, A., Yokoi, S., Karhikeyan, A.S., Raghothama, K.G., Beak, D., Koo, Y.D., Jin, J.B., Bressan, R.A., Yun, D.-J., & Hasegawa, P.M. (2005) The Arabidopsis SUMO E3 ligase SIZ1 controls phosphate deficiency responses. Proc. Natl. Acad. Sci. USA 102, 7760-7765.