OIE Reference Laboratory Reports Activities in 2011 Name of disease (or topic) for which you are a designated OIE Reference Laboratory: Address of laboratory: Highly pathogenic avian influenza and low pathogenic avian influenza (poultry) Australian Animal Health Laboratory CSIRO Livestock Industries Private Bag 24, Geelong, Victoria, 3220, AUSTRALIA Tel.: (61 3) 5227 5000 Fax: (61 3) 5227 5555 e-mail address: website: Name (including Title and Position) of Head of Laboratory (Responsible Official): Paul.Selleck@csiro.au www.csiro.au Dr Martyn Jeggo Name(including Title and Position) of OIE Reference Expert: Dr Paul Selleck Name (including Title and Position) of writer of this report (if different from above): Dr Peter Daniels Annual reports of OIE Reference Centres, 2011 1 Highly pathogenic avian influenza and low pathogenic avian influenza (poultry) Part I: Summary of general activities related to the disease 1. Test(s) in use/or available for the specified disease/topic at your laboratory AAHL maintains a broad range of diagnostic tests and supporting laboratory technologies for avian influenza which include virus isolation in embryonated eggs, virus characterization by haemagglutination and neuramidase inhibition (HAI and NI), molecular diagnosis by TaqMan assay for H5, H7 and Influenza A, rapid diagnosis by antigen detection tests such as indirect fluorescent antibody tests on tissue impression smears, immunohistochemistry on formalin fixed tissues, electron microscopy and immuno-EM. Isolates may be pathotyped by pathogenicity tests in chickens and molecularly by sequence analysis. Further characterization is undertaken by sequence analysis for molecular epidemiology and detection of other nucleotide changes of interest in specific situations. Serology is conducted primarily by Type A group specific C-ELISA tests and haemagglutinin specific HAI tests. The agar gel immuno-diffusion test (group antigen) can be offered. Specialized HI testing in support of antigenic cartography is conducted. Isolates are tested phenotypically for susceptibility or resistance to antiviral agents. During 2011 the following tests were performed: 2 Test For Specificity Total C-ELISA Antibody Group 1901 AGID Antibody Group 128 H5 HI test Antibody H5 96 H7 HI test Antibody H7 89 H9 HI test Antibody H9 28 HI test (other) Antibody H type 16 VNT Antibody H type 0 HA typing Virus characterization Haemagglutinin type 45 NA typing Virus characterization Neuraminidase type 0 Taqman real-time PCR Molecular detection Group 4568 Taqman real-time PCR Virus characterization H5 277 Taqman real-time PCR Virus characterization H7 237 PCR and sequencing Molecular pathotyping HA gene cleavage site 38 PCR and sequencing Virus Characterisation HA/NA gene 206 Embryonated chicken egg culture Virus isolation Group 682 Avian influenza immunohistochemistry Antigen detection Group 19 Annual reports of OIE Reference Centres, 2011 Highly pathogenic avian influenza and low pathogenic avian influenza (poultry) 2. Production and distribution of diagnostic reagents Type of reagent Amount supplied nationally (including for own use) Amount supplied to other countries Inactivated antigens for each HA and NA type 150 ml 100 ml Monospecific chicken serum against each HA and NA type 150 32 ml Inactivated Agar Gel Immunodiffusion reagents for detection of antibodies in test sera 170 ml 20 ml Nucleoprotein Monoclonal antibody 25 ml 10 ml Influenza viral RNA 36 ml 14 ml Antigenic Cartography Serum 40 ml 320 ml Antigenic Cartography Antigens 20 ml 100 ml Inactive antigen and serum for H9 and H6 to Vietnam - 13000 tests Part II: Activities specifically related to the mandate of OIE Reference Laboratories 3. International harmonisation and standardisation of methods for diagnostic testing or the production and testing of vaccines a) Establishment and maintenance of a network with other OIE Reference Laboratories designated for the same pathogen or disease and organisation of regular inter-laboratory proficiency testing to ensure comparability of results AAHL is accredited as a proficiency test (PT) provider to the international standard ISO/IEC17043 ;2010 Conformity Assessment – General Requirements for Proficiency Testing in the fields of i) Virology (immunological methods of detection and identification by molecular techniques) and ii) Serology of Infection. AAHL also participated during the year in a number of PT programs. Importantly one of these included the exercise conducted by the OFFLU roficienct testing technical Activity, with panels distributed by the Friedrich-LoefflerInstitut (FLI). Other PT exercises in which AAHL participated during 2011 were the GD - Animal Health Service Deventer program for influenza serology (AI ELISA, H5 & H7 HI) and the RCPA AI PCR PT program. The latter services mainly public health laboratories in Australia and New Zealand as well as laboratories in Southeast Asia and Africa. AAHL also provided reagents for the RCPA program. Under the AI and NDV Twinning Project with the Veterinary Research Institute (VRI) in Malaysia AAHL staff worked with VRI staff to provide PT panels for the laboratories in Malaysia supported by the VRI. PT was provided in support of testing to detect influenza A by real time PCR (M gene and H5) and for HI serology, with differential diagnosis of AI and NDV incorporated into both panels. AAHL is collaborating with Animal Health and Veterinary Laboratories Agency (AHVLA) at Weybridge and the Istituto Zooprofilattico Sperimentale delle Venezieto (IZSV) at Padova to standardize HI testing in support of the WHO Vaccine Composition Meeting (WHO VCM) process, especially for the monitoring of antigenic variation among H5 and H9 isolates from animals. The standardization protocol is based on antisera raised in ferrets and is coordinated through CDC in Atlanta and St Judes in Memphis. Annual reports of OIE Reference Centres, 2011 3 Highly pathogenic avian influenza and low pathogenic avian influenza (poultry) b) Organisation of inter-laboratory proficiency testing with laboratories other than OIE Reference Laboratories for the same pathogens and diseases to ensure equivalence of results: EQA programs for both serology and real time PCR were provided by AAHL throughout Southeast Asia under FAO and OIE programs as well as Australian Government programs. PT for animal influenza A (matrix gene real time PCR) were conducted in 10 laboratories in 8 countries; Indonesia, Malaysia, Thailand, Vietnam, Myanmar, Laos, Cambodia and the Philippines and similarly PT for H5 real time PCR tests were carried out in those same 10 laboratories. Each proficiency testing panel contains 10 samples for PCR diagnosis and 10 samples for serology (haemagglutination inhibition). The PT rounds are evaluated with a summary report with individual reports being sent to each laboratory. The results from the PT are discussed at the laboratory network meetings organised through FAO and OIE. Regional guidelines are developed as part of the laboratory network to harmonise and standardise methods used for animal influenza testing. Australia has coordinated its government laboratories into a functional network for responses to emergency animal diseases – Laboratories for Emergency Animal Disease Diagnosis and Response, LEADDR – with the mission to coordinate a national laboratory network to detect and manage outbreaks of selected EADs. The network is coordinating an expanding diagnostic and surge capacity for EAD outbreaks nationwide, including those which have the potential to threaten human health. Through its role in LEADDR, and specifically the AI working group in LEADDR, AAHL has helped coordinate adoption of an agreed national real time PCR test for AI detection that detects all strain and particularly detects AI viruses that occur in Asia. PT in support of this test is being provided. AAHL contributes reagents to and participates in ANQAP, the Australian national Quality Assurance Program, a PT provision service to Australian and regional veterinary laboratories. AAHL participated in the AI AGID test round. 4. Preparation and supply of international reference standards for diagnostic tests or vaccines OIE International Standard Serum for the agar gel immunodiffusion test Reagents supplied Antiserum H types 1-16 were brought over for use as reference material (1 ml of each) Inactivated Antigen for H types 1-16 were supplied for use as reference material (5 ml of each). Inactivated swine influenza antigen and antiserum was supplied. (see the table below) 4 Antiserum Antigen Yes H1N9 A/shelduck/WA/1757/1978 Yes H1N1 A/swine/Australia/???/2010 Yes Yes H2N2 A/duck/Hokkaido/95/2001 No Yes H3N8 A/black duck/WA/699/1978 Yes Yes H4N4 A/grey teal/WA/1840/1979 Yes Yes H5N1 A/chicken/Vietnam/8/2004 Yes Yes H6N5 A/shearwater/Australia/1975 Yes Yes H7N7 A/chicken/North Korea/7916/2005 Yes Yes H8N4 A/turkey/Ontario/6118/1967 Yes Yes H9N2 A/turkey/Wisconsin/1966 Yes Yes H10N7 CK/NSW/CV10-1004/2010 Yes Yes H11N9 A/Sharp-tailed Sandpiper/Australia/6/2004 Yes Yes H12N9 A/red necked stint/WA/5745/1984 Yes Yes H13N6 A/gull/Maryland/704/1977 Yes Yes H14N6 A/Mallard/Gurjev/244/82 Yes Yes H15N9 A/shelduck/WA/1762/1979 Yes Yes H16N3 A/gull/Denmark/68110/2002 Yes Yes Annual reports of OIE Reference Centres, 2011 Highly pathogenic avian influenza and low pathogenic avian influenza (poultry) AAHL Reference # 5. Description Quantity 0202-11-1600 H1N1 A/New Jersey/8/1976 2x1ml 0904-07-1501 H5N1 anti-A/CHICK/KONAWE SELATAN/BBVM204(O)/07 2x1ml 0607-24-0560 H7N7 A/chicken/North Korea/7916/2005 2x1ml 0608-15-0902 H9N2 A/TURKEY/WISCONSIN/66 2x1ml Research and development of new procedures for diagnosis and control AAHL continues to implement research relating to AI pathogenesis and transmission as well as studies of AI vaccines and vaccination. This involves studies of H5N1 in both domestic poultry and mammalian infection models investigating the impact of route of exposure on infection outcomes, virulence determinants associated with host adaptation, and mechanisms of protection afforded by vaccines. Additional projects have been developed in response to pandemic H1N1 including evaluation of the efficacy of novel antiviral therapies in suppressing virus replication in the lung and of new vaccine delivery systems. Major studies continue of transgenic techniques to develop poultry with an enhanced immune system that will be substantially resistant to AI infection. Other work using similar scientific approaches investigates development of antiviral therapeutics. Evaluation of the anti-viral properties of commercial chemical compounds also continues, with the relative susceptibility of AI isolates from various Southeast Asian countries to the major influenza antivirals being tested in an ongoing study. Regarding diagnostic tests, a new TaqMan assay for avian influenza N1 subtype has been developed. The test is used for rapid detection of HPAI (H5N1), in conjunction with H5 subtype TaqMan PCR. In addition, a real-time PCR assay using high resolution melting analysis (HRM) for simultaneous detection and differentiation LPAI and HPAI (H5 subtype) is under development. A TaqMan assay for influenza H9 subtype has been established and evaluated for diagnostic application. An inactivated pH1N1-like antigen preparation has been tested against a range of reference antisera and has exhibited exceptional utility for the diagnosis of pH1N1. For agent characterization’ algorithms have been established for high-throughput whole genome capillary sequencing for HPAI and pH1N1 2009 together with phylogenetics workflow for virus characterization, molecular epidemiology, and tracking virus evolution and compared with the Protocols and workflow for next-generation ultradeep sequencing using the Roche 454 whole genome pyrosequencering for whole genome characterization of H5N1 HPAI have been established with on-going evaluation against the capillary sequencing approach. In particular sequence and phylogenetic data were shared with International Reference Laboratories for AI and contributed to WHO and OFFLU initiated 2010 and 2011 Vaccine Composition Meetings for H5N1 as well as to the WHO/FAO/OIE H5N1 Evolution Working Group towards the recent (2011) revision of H5N1 clade evolution and nomenclature. A multiplexed molecular diagnostic test system using Luminex technology for rapid identification and differentiation of important poultry viruses has been developed which can detect and differentiate influenza type A, H5, H7, pandemic H1N1 and NDV field and V4 vaccine strains, and the new incursion into Australia of the pigeon associated APMV-1. An OFFLU project on antigenic and genetic characterisation and evolution of H5N1 HPAI viruses in Indonesia and SE Asia continues, with some of the work now being undertaken in Indonesian laboratories. The work included - genetic and antigenic characterization of clade 2.1.3 H5N1 viruses from Indonesian poultry sectors under the OFFLU Indonesia project identification and characterization of H5N1 viruses from Myanmar (clade 2.3.2 and clade 2.3.4), and Vietnam (clade 1, clade 2.3.2 and clade 2.3.4). the characterization of clade 2.3.2 viruses provided valuable contribution towards international efforts to track the current rapid spread and dominance of this lineage in several regions of the world. Wild bird isolates of avian influenza viruses from Australia and Southeast are sequenced and analysed on submission. Annual reports of OIE Reference Centres, 2011 5 Highly pathogenic avian influenza and low pathogenic avian influenza (poultry) 6. A limited number of Australian avian influenza viruses were genetically characterized including H6, H10 and low path H5 LPAI’s (e.g. H5N3). Capability has been established for molecular identification of non-H5 avian influenza subtypes, including H and N sub-typing by panHA and NA-subtype specific sequencing assays respectively. Genetic characterization assays for wildtype H9 viruses, specifically H9N2, have been established and tested. Collection, analysis and dissemination of epizootiological data relevant to international disease control Influenza virus isolates have been received from Myanmar, Vietnam and Indonesia during the reporting period, as listed in Sections 5 and 10 of this report. AAHL is an active contributor, along with AHVLA and IZSV, to the OFFLU coordinated international collaboration to supply current data from animal sources to the WHO regarding the antigenic and genetic characteristics of influenza A(H5N1) and influenza A(H9N2) viruses for the development of candidate vaccine viruses for pandemic preparedness. It contributed regional (Indonesia, LaoPDR, Myanmar, Vietnam) viral gene sequences, HI titres and molecular epidemiology data to the February and September 2011 WHO Vaccine Composition Meetings (WHO VCM). AAHL continues to collaborating in an international partnership coordinated by OFFLU and managed by FAO to address issues of antigenic mismatch between some circulating field strains and H5 antigens in available vaccines in Indonesia. Decisions on which antigens to include in H5 vaccines for use in poultry in that country are based on the results of the project. AAHL is helping to develop capacity in Indonesian laboratories to conduct the antigenic analyses and bioinformatics associated with this work. AAHL is a member in WHO/OIE/FAO H5N1 Evolution Working Group (H5-EWG), contributed Indonesian clade 2.1 H5N1 HA gene sequences and participated in analyses and discussions towards the 2011 update of H5N1 clade nomenclature. H5-EWG published the 2011 update of H5N1 clade nomenclature in the Journal Influenza and Other Respiratory Viruses and on the WHO website In December 2011 the H5-EWG initiated an activity to provide guidance to prominent influenza databases for the development of software tool to automatically assigns clade to each new H5 HA sequence deposited. This activity is ongoing. AAHL is member of the OFFLU Global Swine Influenza Surveillance Sub-network (OFFLU SIV Group) working to Coordinate, harmonise and to advocate global swine influenza surveillance. Epidemiological studies in Indonesia and Vietnam are investigating AI transmission in markets, AI infection in ducks, and the impact of vaccination on AI transmission in both commercial and village sectors. This work includes investigation of whether long term persistence and shedding of HPAI H5N1 viruses occurs in ducks. 7. Maintenance of a system of quality assurance, biosafety and biosecurity relevant to the pathogen and the disease concerned AAHL’s diagnostic operations are conducted under NATA accreditation to ISO/IEC 17025:2005. In addition to its NATA accreditation AAHL maintains certification to AS/NZS ISO 9001:2008 for the management of its Quality Assurance System as well as AS/NZS ISO 14001:2004 for environmental management. AAHL is accredited to ISO/IEC 17043 as an international proficiency testing provider for virology and serology. 8. Provision of consultant expertise to OIE or to OIE Member Countries 6 Linfa Wang was invited as a speaker at the XII International Symposium on Respiratory Viruses, Rome, Italy, 11-17 Mar 2011 Frank Wong attended the OFFLU Technical Meeting – Influenza in Swine, OIE Headquarters Paris, France 5-8 Apr 2011. Paul Selleck and Gemma Carlile visited Regional Laboratories as part of the OIE Twinning Project to establish PT panel methodology with lab staff in country, VRI Ipoh, Malaysia, 15-28 May 2011. Chris Morrissy was involved in meetings to prepare for linking assessment missions and gap analysis in Viet Nam, 5-19 Jun 2011. Frank Wong and Mai Hlaing Loh conducted sequencing training and participated in a sequence network meeting as part of the OIE Twinning Project, Ipoh, Malaysia, 20 -25 Jun 2011 Annual reports of OIE Reference Centres, 2011 Highly pathogenic avian influenza and low pathogenic avian influenza (poultry) 9. John Allen and Chris Morrissy were invited to undertake a scoping mission for a Lab-Field Epidemiology Training Course for FAO, Bangkok, Thailand, 26 Jun to 2 Jul 2011 Frank Wong travelled to the national PUSVETMA laboratory in Surabaya to provide sequencing training and to participate in a sequencing network meeting as part of an OFFLU Project, Surabaya, Indonesia, 3-9 Jul 2011 Gemma Carlile and Paul Selleck conducted follow-up meetings and analysis of test results as part of the OIE Twinning Project with VRI, Ipoh, Malaysia, 24-29 Jul 2011. Peter Daniels attended the FAO/OIE Regional Laboratory Network Technical Advisory Group Meeting, Bangkok, Thailand 2-6 Aug 2011 Chris Morrissy was invited to attend the FAO LabNet meeting in Bangkok, Thailand, 4-5 Aug 2011 Peter Daniels chaired the OFFLU Steering Committee Meeting and attended the ad hoc Group meeting on Biosafety and Biosecurity in Veterinary Laboratories, Paris, 14-21 Sept 2011 John Allen attended the WHO- Regional Workshop on Emerging and Dangerous Pathogens Laboratory Network (EDPLN) Meeting in Jakarta, Indonesia, 20-22 Sept 2011. Sam McCullough attended the 23rd Veterinary Association Annual Meeting, Ipoh, Malaysia, 23-26 Sept 2011. Chris Morrissy attended a 4 way linking meeting as the OIE representative with FAO and WHO, Hanoi, Vietnam, 15-19 Oct 2011 Chris Morrissy and Gemma Carlile attended the meeting on Laboratory Strengthening in Kuala Lumpur, Malaysia, 19-21 Nov 2011. Peter Durr and Paul Selleck visited PUSVETMA to continue work under the newly agreed OFFLU project, Surabaya, Indonesia, 1- 8 Dec 2011. Provision of scientific and technical training to personnel from other OIE Member Countries The following training was conducted in member countries: Paul Selleck conducted Anitgenic Cartography training and helped facilitate the HI Cartography National Workshop, Jogjakarta, Indonesia, 15 Mar to 7 Apr 2011. Paul Selleck and Gemma Carlile visited Regional Laboratories as part of the OIE twinning Project to establish Proficiency Testing Panel methodology with lab staff in country, Ipoh, Malaysia, 15-28 May 2011. Peter Durr travelled to Indonesia as part of the AusAID project to develop and oversee a training course for lab staff in the use of Excel, Bali and Jakarta, Indonesia, 15-24 Jun 2011. Frank Wong and Mai Hlaing Loh provided sequencing training to the Veterinary Research Institute as part of the OIE Twinning Project, Ipoh, Malaysia, 20-25 Jun 2011. Mai Hlaing Loh provided sequencing training as part of the OFFLU project to staff at Pusvetma, Surabaya, Indonesia, 3-9 Jul 2011. Frank Wong provided sequencing training under the OFFLU Project, Surabaya, Indonesia, 3-9 Jul 2011. Bernadette O’Keefe provided guidance to identify gaps and proposed areas for improvement and report on their QA program to the Veterinary Research Institute (VRI) as part as part of the OIE Twinning project, Ipoh, Malaysia, 2429 Jul 2011 Gemma Carlile attended the Veterinary Research Institute (VRI) as part of the OIE Twinning project for Avian Influenza and Newcastle Disease, Ipoh, Malaysia, 24-29 Jul 2011 Paul Selleck attended the Veterinary Research Institute (VRI) as part of the OIE Twinning project for Avian Influenza and Newcastle Disease, Ipoh, Malaysia, 24-29 Jul 2011 Peter Durr provided user acceptance training to DIC Wates virology and serology staff under the OFFLU LIMS Project, Wates, Indonesia, 22-30 Oct 2011. Paul Selleck and Peter Durr provided assistance and training for the rollout of the final phase of the Alat Prestein program under the OFFLU project, Pusvetma, Surabaya, Indonesia, 04-10 Dec 2011. The following training was conducted at AAHL: FAO QA course : The two week training course was part of the AAHL / FAO collaboration project for IDENTIFY in lab capacity building for quality assurance, proficiency and reagent production, AAHL, 5-16 Sept 2011. Advanced Biorisk Training: The one week training course was part of the AAHL / FAO collaboration project for the Technical Support for Biosafety and Laboratory Training, AAHL, 14-18 Nov 2011. Laboratory Engineering and Equipment Maintenance Training - The one week training course is part of the AAHL / FAO collaboration project for the Laboratory Engineering and Equipment Maintenance Training, AAHL, 21-25 Nov 2011. Annual reports of OIE Reference Centres, 2011 7 Highly pathogenic avian influenza and low pathogenic avian influenza (poultry) 10. Provision of diagnostic testing facilities to other OIE Member Countries Overseas submissions to AAHL for confirmatory testing for Avian Influenza for 2011: Affiliated Program NZAID OFFLU/FAO FAORAP FAORAP 8 Submitter NCVD, Hanoi, Vietnam DGLAHS Indonesia Yangon Diagnostic Laboratory, Livestock Breeding and Veterinary Department, Yangon, Myanmar Yangon Diagnostic Laboratory, Livestock Breeding and Veterinary Department, Yangon, Myanmar Country Date n samples n HAsequenced Host origin H5N1 HPAI H9N2 LPAI Other LPAI (HAsubtyping) Vietnam 12/01/11 176 162 chicken n=13; clade 1 (n=9), clade 2.3.4 (n=3), clade 2.3.2 (n=1) Indonesia 21/02/11 32 23 chicken n=23; clade 2.1.3 n/a Myanmar 03/03/11 2 2 chicken n=2; clade 2.3.2 n/a chicken n=6; clade 2.3.2 (n=2), clade 2.3.4 (n=4) n/a Myanmar 08/04/11 6 6 TOTAL TOTAL 216 193 17 H3Nx (n=45) H4Nx (n=8) H5Nx LPAI (n=9) H6Nx (n=1) H7Nx (n=8) H7N7 (n=8) H9N2 (n=17) H10Nx (n=7) H11Nx (n=3) nottypable (n=43) Annual reports of OIE Reference Centres, 2011 Highly pathogenic avian influenza and low pathogenic avian influenza (poultry) 11. Organisation of international scientific meetings on behalf of OIE or other international bodies No such meetings were organized this reporting period. 12. Participation in international scientific collaborative studies AAHL has continued involvement in the OFFLU coordinated project managed by FAO “Monitoring AI virus variants in Indonesian poultry and defining an effective and sustainable vaccination strategy”. Isolates of HPAI from laboratories in Indonesia servicing the agricultural sector have been received for analysis as outlined in Section 10 and other capacity building exercises as outlined in Section 6 and 8. 13. Publication and dissemination of information relevant to the work of OIE (including list of scientific publications, internet publishing activities, presentations at international conferences) Presentations at international conferences and meetings L. Mia Kim, Gwenaelle Dauphin, Frank Wong, Paul Selleck, Peter Daniels, David Swayne, Akhmad Junaidi, Kulon Progo, Agus Wiyono and Abdul Rahman and Ron Fouchier (2011) OFFLU: Contributions toward improved vaccine strain selection for poultry. 1st International One Health Congress, Melbourne Convention Centre, 14-16 February 2011. Paul Selleck (2011) Microbiological Security – Biosafety and Biosecurity. Malaysian National Avian Influenza and Newcastle Disease Proficiency Testing Program Workshop, VRI, Ipoh, Malaysia 25 th May 2011. Paul Selleck (2011) Repeatable and Reproducible Haemagglutination Tests and AAHL’s HI Protocol. Malaysian National Avian Influenza and Newcastle Disease Proficiency Testing Program Workshop, VRI, Ipoh, Malaysia 25th May 2011. Paul Selleck (2011) Monitoring Antigenic Variation of Avian Influenza Viruses Towards Improved Vaccine Selection. Asia Pacific Poultry Technical Conference, Hilton Hotel, Kuala Lumpur, 26-28 September, 2011. Paul Selleck and Frank Wong (2011) Characterisation of Avian Influenza Viruses from Vietnam. Final Technical Workshop of NZAP funded project “Development of epidemiological skills and technical information to support the management and control of Highly Pathogenic Avian Influenza in Viet Nam, Can Tho, Vietnam, 3-4 October 2011. Paul Selleck (2011) Diagnostic Testing for Non-cytopathogenic Viruses. National Diagnostic Virology Workshop, DIC Wates, Jogjakarta, Indonesia, 18-19 October 2011. Paul Selleck (2011) Laboratory Biosafety – Virology and Serology. Laboratory Safety and Biorisk Management Training Course, AAHL, 14-18 November 2011. Paul Selleck (2011) Antiserum Production in Chickens. AAHL and OFFLU Training in Production of Antisera in Chickens. PUSVETMA, Surabaya, 8-9 December, 2011. Boyd, Vicky, Foord, Adam, Heine, Hans. Detection and Differentiation of Avian and Zoonotic Pathogens by a Luminex Liquid Bead Array Multiplex Assay. In: 1st International One Health Congress; 14-15 Feb 2011; Melbourne. The Congress; 2011. 1. Burggraaf, Simon, Bingham, John, Kimpton, Wayne, Bean, Andrew. High levels of cytokines are associated with increased H5N1 influenza severity in chickens when compared to ducks. In: Infection and Immunity Lorne 2011; 16-18 February 2011; Lorne. Lorne, Vic.: The Conference; 2011. Jenkins, Kristie, Keyburn, Anthony, Doran, Tim, Bean, Andrew, Tizard, Mark. Modification of the chicken immune system using microRNAs. In: Lorne Infection and Immunity; 16th -18th February, 2011; Lorne, Vic. Lorne, Vic.: Victorian Infection and Immunity Network; 2011. 1. Annual reports of OIE Reference Centres, 2011 9 Highly pathogenic avian influenza and low pathogenic avian influenza (poultry) Wong, Frank, Selleck, Paul, Morrissy, Chris, Allen, John, Daniels, Peter. Recent H5N1 activity and diversification in commercial poultry in the Southeast Asian region. In: 7th Australian Influenza Symposium; 6th-7th October 2011; Bio21 Molecular Science and Biotechnology Institute, Melbourne. Melbourne, Vic.: WHO Collaborating Centre for Reference and Research on Influenza, VIDRL; 2011. 1 10 Scientific publications in peer-reviewed journals Garry W Lynch, Paul Selleck, W Bret Church and John S Sullivan (2011) Seasoned adaptive antibody immunity for highly pathogenic pandemic influenza in humans. (Review Article) Immunology and Cell Biology (2011), 1–10. Ian Barr and Paul Selleck (2011) Editorial. Influenza, our constant companion. Microbiology Australia 32:2-3 Microbiology Australia – Influenza and the 2009 Pandemic. Ian Bar and Paul Selleck editors Barrett S, Mohr PG, Schmidt PM, McKimm-Breschkin JL. Real Time Enzyme Inhibition Assays Provide Insights into Differences in Binding of Neuraminidase Inhibitors to Wild Type and Mutant Influenza Viruses. PLoS One. 2011;6(8). Boyd, Vicky, Foord, Adam, Heine, Hans. Detection and Differentiation of Avian and Zoonotic Pathogens by a Luminex Liquid Bead Array Multiplex Assay. EcoHealth 2011;7:S140 Brown L, Cobbin J, Middleton D, Barr I, Zeng W, Jackson D. Universal vaccination: is this premature with current vaccine approaches? Influenza and other Respiratory Viruses. 2011;5:15-8. Burggraaf S, Bingham J, Payne J, Kimpton WG, Lowenthal JW, Bean AG. Increased inducible nitric oxide synthase expression in organs is associated with a higher severity of H5N1 influenza virus infection. PLoS One. 2011;6(1):e14561. Daniels P, Hamilton K, Dauphin G, Mumford E, Swayne D, Edwards S. OFFLU, A Novel International Partnership Approach to a Major Zoonotic Threat. EcoHealth. 2011;7:S122 Durr, Peter Emerging and re-emerging diseases of wildlife and domestic animals – redefining the role of climate change. EcoHealth 2011;7:S74 Edenborough K, Yamada M, Lowther S, Bingham J, Haining J, Gilbertson B, et al. Route of H5N1 exposure in ferrets affects pathogenesis and severity of disease. Influenza and Other Respiratory Viruses. 2011;5:87-9. Foord AJ, Selleck P, Colling A, Klippel J, Middleton D, Heine HG. Real-time RT-PCR for detection of equine influenza and its evaluation using samples from horses infected with A/equine/Sydney/2007 (H3N8). Australian Veterinary Journal. 2011;89 Suppl 1:37-8. Holyoake PK, Kirkland PD, Davis RJ, Arzey KE, Watson J, Lunt RA, et al. The first identified case of pandemic H1N1 influenza in pigs in Australia. Australian Veterinary Journal. 2011;89(11):427-31. Karpala AJ, Bingham J, Schat KA, Chen LM, Donis RO, Lowenthal JW, et al. Highly pathogenic (H5N1) avian influenza induces an inflammatory T helper type 1 cytokine response in the chicken. Journal of Interferon & Cytokine Research. 2011;31(4):393-400. Karpala AJ, Lowenthal JW, Bean AG. Identifying innate immune pathways of the chicken may lead to new antiviral therapies. Veterinary Immunology and Immunopathology. 2011. Karpala AJ, Stewart C, McKay J, Lowenthal JW, Bean AG. Characterization of chicken Mda5 activity: regulation of IFN-beta in the absence of RIG-I functionality. Journal of Immunology. 2011;186(9):5397-405. Kim LM, Dauphin G, Wong F, Selleck P, Daniels P, Swayne D, et al. OFFLU: Contributions Toward Improved Vaccine Strain Selection for Poultry. EcoHealth. 2011;7:S63 Kirkland PD, Davis RJ, Wong D, Ryan D, Hart K, Corney B, et al. The first five days: field and laboratory investigations during the early stages of the equine influenza outbreak in Australia, 2007. Australian Veterinary Journal. 2011;89:6-10. Annual reports of OIE Reference Centres, 2011 Highly pathogenic avian influenza and low pathogenic avian influenza (poultry) Kittelberger R, McFadden AMJ, Hannah MJ, Jenner J, Bueno R, Wait J, et al. Comparative evaluation of four competitive/blocking ELISAs for the detection of influenza A antibodies in horses. Veterinary Microbiology. 2011;148(2-4):377-83. Miller DS, Finnie J, Bowden TR, Scholz AC, Oh S, Kok T, et al. Preclinical efficacy studies of influenza A haemagglutinin precursor cleavage loop peptides as a potential vaccine. Journal of General Virology. 2011;92:1152-61. Mohr PG, Geyer H, McKimm-Breschkin JL. Mixed influenza A and B infections complicate the detection of influenza viruses with altered sensitivities to neuraminidase inhibitors. Antiviral Research. 2011;91(1):20-2. Oakey J, Hawkesford T, Smith C, Hewitson G, Tolosa X, Wright L, et al. Validation of an influenza virus A 5 ' Taq nuclease assay for the detection of equine influenza virus A RNA in nasal swab samples. Australian Veterinary Journal. 2011;89:39-42. Rockman S, Maher D, Middleton D. The use of hyperimmune serum for severe influenza infections. Critical Care Medicine. 2011. Schmidt PM, Attwood RM, Mohr PG, Barrett SA, McKimm-Breschkin JL. A Generic System for the Expression and Purification of Soluble and Stable Influenza Neuraminidase. PLoS One. 2011;6(2). Stewart CR, Bagnaud-Baule A, Karpala AJ, Lowther S, Mohr PG, Wise TG, et al. Toll-Like Receptor 7 Ligands Inhibit Influenza A Infection in Chickens. Journal of Interferon & Cytokine Research 2011. Stewart CR, Karpala AJ, Lowther S, Lowenthal JW, Bean AG. Immunostimulatory motifs enhance antiviral siRNAs targeting highly pathogenic avian influenza H5N1. PLoS One. 2011;6(7):e21552. Verity EE, Camuglia S, Agius CT, Ong C, Shaw R, Barr I, et al. Rapid generation of pandemic influenza virus vaccine candidate strains using synthetic DNA. Influenza and Other Respiratory Viruses. 2011. Watson J, Daniels P, Kirkland P, Carroll A, Jeggo M. The 2007 outbreak of equine influenza in Australia: lessons learned for international trade in horses. Revue Science et Technique. 2011;30(1):87-93. Watson J, Halpin K, Selleck P, Axell A, Bruce K, Hansson E, et al. Isolation and characterisation of an H3N8 equine influenza virus in Australia, 2007. Australian Veterinary Journal. 2011;89 Suppl 1:35-7. Watson J, Selleck P, Axell A, Bruce K, Taylor T, Heine H, et al. Diagnosis of equine influenza virus infections in quarantine stations in Australia, 2007. Australian Veterinary Journal. 2011;89 Suppl 1:4-6. Wibawa H, Henning J, Wong F, Selleck P, Junaidi A, Bingham J, et al. A molecular and antigenic survey of H5N1 highly pathogenic avian influenza virus isolates from smallholder duck farms in Central Java, Indonesia during 2007-2008. Virology Journal. 2011;8:425. Wong, Frank, Deng, Yi-Mo. Pandemic H1N1 2009 influenza in pigs in Australia. Microbiology Australia. 2011; 32(1):29-41. Wong, Frank, Daniels, Peter, Komadina, Naomi, Barr, Ian, Harrower, Bruce, Deng, Yi-Mo Characterisation of A(H1N1) 2009 Pandemic Influenza Viruses from across the Human-Animal interface in Australian Swine Herds EcoHealth 2011;7:S31. _______________ Annual reports of OIE Reference Centres, 2011 11