Chapter 12 - Web-based Resources for Continental Margin

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Liu K-K, Atkinson L, Quiñones RA, Talaue-McManus L (ed)
(2010) Carbon and nutrient fluxes in continental
margins: a global synthesis. Springer, Berlin
References
Chapter 12
Balzer W, Helder W, Epping E, Lohse L, Otto S (1998) Benthic denitrification and
nitrogen cycling at the slope and rise of the N.W. European Continental Margin
(Goban Spur). Prog Oceanography 42:111–126
Baretta-Bekker JG (ed) (1995) European Regional Seas Ecosystem Model I (1990–
1993) Neth J Sea Res (special issue) 33(3–4):229–483
Baretta-Bekker JG, Baretta JW (ed) (1997) European Regional Ecosystem Model II
(1993–1996) J Sea Res (special issue) 38(3–4):169–436
Batchelder HP, Barth JA, Kosro PM, Strub PT, Brodeur RD, Peterson WT, Tynan CT,
Ohman MD, Botsford LW, Powell TM, Schwing FB, Ainley DG, Mackas DL,
Hickey BM, Ramp SR (2002) The GLOBEC Northeast Pacific California current
system program. Oceanography 15:36-47
Bissett WP, Arango H, Arnone R, Chant R, Glenn S, Mobley C, Moline MA, Schofield
OM, Steward R, Wilkin J (in prep) The prediction of hyperspectral inherent
optical properties in the New Jersey Bight
Bissett WP, Walsh JJ, Dieterle DA, Carder KL (1999) Carbon cycling in the upper
waters of the Sargasso Sea: I. Numerical simulation of differential carbon and
nitrogen fluxes. Deep-Sea Res 46:205–269
Broecker WS, Peng TH (1982) Tracers in the sea, Lamont- Doherty Geological
Observatory, Palisades, 690 pp
Buddemeier RW (1996) Groundwater flux to the Ocean: Definitions, data, applications,
uncertainties. In: Buddemeier RW (ed) Groundwater Discharge in Coastal Zone:
Proceedings of an International Symposium, LOICZ Reports and Studies No. 8,
LOICZ, Texel, The Netherlands, pp 16–21
Chao S-Y, Shaw P-T, Wu SY (1996a) Deep water ventilation in the South China Sea.
Deep-Sea Res Pt I 43:445–466
Codispoti LA (1995) Is the ocean losing nitrate? Nature 376:724
Doney SC, Glover DM, Najjar RR (1996) A new coupled, one-dimensional biologicalphysical model for the upper ocean: Application to the JGOFS Bermuda Atlantic
Timeseries Study (BATS) site. Deep-Sea Res Pt II 43:591–624
Falkowski PG (1997) Evolution of the nitrogen cycle and its influence on the biological
sequestration of CO2 in the ocean. Nature 387:272–275
Fasham MJR, Ducklow HW, McKelvie SM (1990) Nitrogen-based model of plankton
dynamics in the oceanic mixed layer. J Mar Res 48(3):591–639
Fennel K, Wilkin J, Levin J, Moisan JR, O’Rielly J, Haidvogel D (2006) Nitrogen cycling
in the Middle Atlantic Bight: Results from a three-dimensional model and
implications for the North Atlantic nitrogen budget, Global Biogeochem Cy
20:GB3007. Doi:10.1029/2005GB002456
Franks PJS (1995) Coupled physical-biological models in oceanography. Rev Geophys
(Supplement):1177–1187
Franks PJS, Chen C (2001) A 3-D prognostic model study of the ecosystem over
Georges Bank and adjacent coastal regions, Part II, Coupled biological and
physical model. Deep-Sea Res 48:457–482
1
Friedrichs MAM (2001) A data assimilative marine ecosystem model of the central
equatorial Pacific: Numerical twin experiments. J Mar Res 59:859–894
Galloway JN, Howarth RW, Michaels AF, Nixon SW, Prospero JM, Dentener FJ (1996)
Nitrogen and phosphorus budgets of the North Atlantic Ocean and its watershed.
Biogeochemistry 35:3–25
Gattuso J-P, Frankignoulle M, Wollast R (1998b) Carbon and carbonate metabolism in
coastal aquatic ecosystems. Annual Review of Ecology and Systematics
29:405–434
Gill AE, Niiler PP (1973) The theory of the seasonal variability in the ocean. Deep-Sea
Res 20:141–177
GOOS (2003) The Integrated, Strategic Design Plan for the Coastal Ocean
Observations Module of the Global Ocean Observing System. Intergovernmental
Oceanographic Commission, GOOS Report No. 125
Gordon DC Jr, Boudreau PR, Mann KH, Ong JE, Silvert WL, Smith SV, Wattayakorn G,
Wulff F, Yanagi T (1996) LOICZ Biogeochemical Modelling Guidelines. LOICZ
Reports & Studies No 5, 96 pp
Gregg WW, Walsh JJ (1992) Simulation of the 1979 spring bloom in the Mid-Atlantic
Bight: A coupled physical/biological/optical model. J Geophys Res 97:5723–
5743
Gruber N, Frenzel H, Doney SC, Marchesiello P, McWilliams JC, Moisan JR, Oram J,
Plattner G-K, Stolzenbach KD (2006) Simulation of the phytoplankton ecosystem
dynamics. Deep-Sea Res Pt I 53:1483–1516
Haidvogel DB, Beckmann A (1999) Numerical ocean circulation modeling. Imperial
College Press, London, 320 pp
Haidvogel DB, Arango HG, Hedstrom K, Beckmann A, Malanotte-Rizzoli P,
Shchepetkin AF (2000) Model evaluation experiments in the North Atlantic
Basin: Simulations in nonlinear terrain-following coordinates. Dyn Atmos Oceans
32:239-281
Hecky RE, Kilman P (1984) Nutrient limitation of phytoplankton in freshwater and
marine environments: A review of recent evidence on the effects of enrichment,
Limnol Oceanogr 33:796–822
Hofmann EE (1998) How do we generalize coastal models to global scale. In: Mantoura
RFC, Martin J-M, Wollast R (ed) Ocean margins processes in global change.
Wiley, New York, pp 401–417
Hofmann, EE, Lascara CM (1998) Overview of interdisciplinary modeling for marine
ecosystems. In: Robinson AR, Brink KH (ed) The Sea, vol 10. Wiley, New York,
pp 507–540
Huggett J, Freon P, Mullon C, Penven P (2003) Modeling the recruitment success of
anchovy (Engraulis encrasicolus) in the southern Benguela: The effect of spatiotemporal spawning patterns on egg and larval transport. Mar Ecol Prog Ser
250:247-262
Jackson GA (2001) Effect of coagulation on a model planktonic food web. Deep-Sea
Res Pt I 48:95–123
Lewis E, Wallace DWR (1998) Program Developed for CO2 System Calculations,
ORNL/CDIAC-105. Carbon Dioxide Information Analysis Center, Oak Ridge
National Laboratory, U.S. Department of Energy, Oak Ridge, Tennessee
Liu K-K, Chao S-Y, Shaw P-T, Gong G-C, Chen C-C, Tang T-Y (2002) Monsoon-forced
chlorophyll distribution and primary production in the South China Sea:
Observations and a numerical study. Deep-Sea Res Pt I 49:1387–1412
Lynch DR, Ip JTC, Naimie CE, Werner FE (1996) Comprehensive circulation model
with application to the Gulf of Maine. Cont Shelf Res 16:875–906
2
Mantua N, Haidvogel D, Kushnir Y, Bond N (2002) Making the climate connections:
Bridging scales of space and time in the U. S. GLOBEC Program.
Oceanography 15(2):75–87
Marchesiello P, McWilliams JC, Shchepetkin A (2001) Open boundary conditions for
long-term integration of regional oceanic models. Ocean Modelling 3:1–20
Marchesiello P, McWilliams JC, Shchepetkin A (2003) Equilibrium structure and
dynamics of the California Current System. J Phys Ocean 33(4):753-783
McGillicuddy DJ, McCarthy JJ, Robinson AR (1995) Coupled physical and biological
modeling of the spring bloom in the North Atlantic (I): Model formulation and onedimensional bloom processes. Deep-Sea Res Pt I 42:1313–1357
Miller AJ, Di Lorenzo E, Neilson DJ, Cornuelle BD, Moisan JR (2000) Modeling
CalCOFI observations during El Niño: Fitting physics and biology. Calif Coop
Oceanic Fish Invest Rep 41:87–97
Moisan JR, Hofmann EE (1996) Modeling nutrient and plankton processes in the
California Coastal Transition Zone. 1. A time- and depth-dependent model. J
Geophys Res 101:22647–22676
Moisan JR, Niiler PP (1998) The seasonal heat budget of the North Pacific: Net heat
flux and heat storage rates (1950–1990). J Phys Ocean 28:401–421
Moisan JR, Hofmann EE, Haidvogel DB (1996) Modeling nutrient and plankton
processes in the California Coastal Transition Zone. 2. A three-dimensional
physical-bio-optical model. J Geophys Res 101:22677–22691
Moisan JR, Moisan TK, Abbott MR (2002) Modeling the effect of temperature on the
maximum growth rates of phytoplankton populations. Ecol Model 153:197–215
Mullon C, Cury P, Penven P (2002) Evolutionary individualbased model for the
recruitment of anchovy (Engraulis capensis) in the southern Bengula, Can J Fish
Aquat Sci 59:910–922
Nixon SW, Ammerman JW, Atkinson LP, Berounsky VM, Billen G, Boicourt WC,
Boynton WR, Church TM, Ditoro DM, Elmgren R, Garber JH, Giblin AE, Jahnke
RA, Owens NJP, Pilson MEQ, Seitzinger SP (1996) The fate of nitrogen and
phosphorus at the land-sea margin of the North Atlantic Ocean. Biogeochemistry
35:141–180
Oguz T, Malanotte-Rizzoli P, Aubrey D (1995) Wind and thermohaline circulation of the
Black Sea driven by yearly mean climatological forcing. J Geophys Res
100:6845–6863
Oguz T, Ducklow HW, Malanotte-Rizzoli P (2000) Modeling distinct vertical
biogeochemical structure of the Black Sea: Dynamical coupling of the oxic,
suboxic and anoxic layers. Global Biogeochem Cy 14:1331–1352
Oguz T, Malanotte-Rizzoli P, Ducklow HW (2001) Simulations of phytoplankton
seasonal cycle with multi-level and multilayer physical-ecosystem models: The
Black Sea example. Ecol Model 144:295–314
Oguz T, Malanotte-Rizzoli P, Ducklow HW, Murray JW (2002) Interdisciplinary studies
integrating the Black Sea biogeochemistry and circulation dynamics.
Oceanography 15:4–11
Orr JC (1999) Ocean Carbon-Cycle Model Intercomparison Project (OCMIP): Phase 1
(1995–1997), GAIM Report 7. IGBP/GAIM Office, EOS, Univ of New Hampshire,
Durham, NH
Penven P, Roy C, Brundrit GB, Colin de Verdiere A, Freon P, Johnson AS, Lutjeharms
JRE, Shillington FA (2001) A regional hydrodynamic model of upwelling in the
Southern Benguela, S Af J Sci 97:1–4
Pickard GL, Emery WJ (1990) Descriptive physical oceanography, An introduction.
Butterwork Heinmann, Oxford, 320 pp
3
Prospero JM, Barrett K, Church T, Dentener F, Duce RA, Galloway JN, Levy HII,
Moody J, Quinn P (1996) Atmospheric deposition of nutrients to the North
Atlantic Basin. Biogeochemistry 35:27–73
Salisbury JE, Campbell JW, Meeker LD, Vörösmarty C (2001) Ocean color and river
data reveal fluvial influence of coastal waters. Eos Trans Am Geophys Union
82:221–227
Seitzinger S, Giblin AE (1996) Estimating denitrification in North Atlantic continental
shelf sediments. Biogeochemistry 35:235–260
Semtner AJ (1974) An oceanic general circulation model with bottom topography.
Technical Report 9, Department of Meteorology, Univ of California, Los Angeles,
99 pp
Shaw P-T, Chao S-Y (1994) Surface circulation in the South China Sea. Deep-Sea Res
Pt I 41:1663–1683
Shchepetkin AF, McWilliams JC (2005) The regional oceanic modeling system
(ROMS): A split-explicit, free-surface, topography-following- coordinate oceanic
model. Ocean Modelling 9:347-404
Smith RC (1981) Remote sensing and depth distribution of ocean chlorophyll. Mar Ecol
Prog Ser 5:359–361
Smith SV, Hollibaugh JT (2000) Water, salt, and nutrient exchanges in San Francisco
Bay. Interagency Ecological Program for the Sacramento-San Joaquin Estuary,
Technical Report 66, 34 pp
Smith SV, Hollibaugh JT, Dollar SJ, Vink S (1991b) Tomales Bay metabolism: C-N-P
stoichiometry and ecosystem heterotrophy at the land-sea interface. Estuar
Coast Shelf Sci 33:223–257
Soetaert K, Middelburg JJ, Herman PMJ, Buis K (2000) On the coupling of benthic and
pelagic biogeochemical models. Earth-Science Reviews 51:173–201
Soetaert K, Herman PMJ, Middelburg JJ, Heip C, Smith C L, Tett P, Wild-Allen K (2001)
Numerical modelling of the shelf break ecosystem: Reproducing benthic and
pelagic measurements. Deep-Sea Res Pt II 48:3141–3177
Spitz YH, Moisan JR, Abbott MR, Richman JG (1998) Data assimilation and a pelagic
ecosystem model: Parameterization using time series observations, J Mar Syst
16:51–68
Spitz YH, Moisan JR, Abbott MR, Richman JG (2001) Using data assimilation to
configure a biogeochemical model of the Bermuda-Atlantic Time Series (BATS).
Deep-Sea Res Pt II 48:1733–1768
Tusseau-Vuillemin MH, Mortier L, Herbaut C (1998) Modeling nitrate fluxes in an open
coastal environment (Gulf of Lions): Transport versus biogeochemical processes.
J Geophys Res 103(C4):7693–7708
Tyrrell T (1999) The relative influences of nitrogen and phosphorus on oceanic primary
production. Nature 400:525–531
Vichi M (2002) Predictability studies of coastal marine ecosystem behavior. PhD thesis.
Univ of Oldenburg, Oldenburg, Germany
Vichi M, Oddo P, Zavatarelli M, Coluccelli A, Coppini G, Celio M, Fonda Umani S,
Pinardi N (2003) Calibration and validation of a one-dimensional complex marine
biogeochemical flux model in different areas of the northern Adriatic shelf.
Annales Geophysicae 21:1–24,
Weingartner TJ, Coyle K, Finney B, Hopcroft R, Whitledge T, Brodeur R, Dagg M,
Farley E, Haidvogel D, Haldorson L, Hermann A, Hinckley S, Napp J, Stabeno P,
Kline T, Lee C, Lessard E, Royer T, Strom S (2002) The Northeast Pacific
GLOBEC Program: Coastal Gulf of Alaska, Oceanography 15(2):48–63
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