1. On a chicken farm, walnut-combed fowl that were crossed with each other produced the following offspring: walnut-combed, 87; rose-combed, 31; pea-combed, 30; and single-combed, 12. If we hypothesize that inheritance of comb type is by two loci, and the results of the cross of dihybrids produce fowl with the four comb types in a 9:3:3:1 ratio of walnut-, rose-, pea-, and single-combed fowl, respectively. Do the data support the hypothesis? Degrees of Freedom Probabilities 0.99 0.95 0.80 0.50 0.20 0.05 0.01 1 2 3 4 5 0.000 0.020 0.115 0.297 0.554 0.004 0.103 0.352 0.711 1.145 0.064 0.446 1.005 1.649 2.343 0.455 1.386 2.366 3.357 4.351 1.642 3.219 4.642 5.989 7.289 3.841 5.991 7.815 9.488 11.070 6.635 9.210 11.345 13.277 15.086 2. Consider the following crosses involving yellow and gray true-breeding Drosophila: Cross F1 F2 Gray female × Yellow male all male gray, all females gray 97 gray females, 42 yellow all female gray, all males yellow ? males, 48 gray males Yellow female × gray male a. Is color controlled by an autosomal or X-linked gene? b. Which allele, gray or yellow, is dominant? c. Assume 100 F2 offspring are produced in the second cross. What kinds and what numbers of progeny do you expect? List males and females separately. 3. The following three recessive markers are known in lab mice: h, hotfoot; o, obese; and wa, waved. A trihybrid of unknown origin is testcrossed, producing the following offspring: Hotfoot, obese, waved 357 Hotfoot, obese 74 Waved 66 Obese 79 Wild-type 343 Hotfoot, waved 61 Obese, waved 11 Hotfoot Total 9 1000 a. If the genes are linked, determine the relative order and map distances between them. b. What was the cis-trans allele arrangement in the trihybrid parent? c. Is there any crossover interference? If yes, how much? 4. A strain of yeast requiring both tyrosine (tyr-) and (arg-) is crossed to the wild-type. After meiosis, the following ten asci are dissected. Classify each ascus as to segregational type (PD, NPD, TT). What is the linkage relationship between these two loci? 1 2 3 4 5 6 7 arg- tyr- arg+ tyr+ arg+ tyr+ arg+ tyr+ arg- tyr+ arg- tyr+ arg- tyr- arg- tyrarg- tyr- arg- tyr+ arg+ tyr+ arg+ tyr+ arg- tyrarg+ tyr+ arg+ tyr+ arg- tyrarg- tyr- arg- tyrarg+ tyr - arg+ tyrarg+ tyr+ arg+ tyr+ arg+ tyr- arg+ tyr+ arg- tyr- arg- tyrarg- tyr+ arg+ tyr - 8 9 10 arg+ tyr+ arg+ tyr+ arg- tyr- arg- tyr- arg- tyrarg- tyr- arg+ tyr+ arg+ tyr+ arg- tyr- arg+ tyr+ arg- tyrarg+ tyr+ 5. The following shows the growth (+) or lack of growth (-) of various mutants in another biosynthesis pathway. Determine this pathway, the point of blockage for each mutant, and the substrate each mutant accumulates. Additives Nothing A B C D E 1 _ _ _ _ _ + Mutants 2 3 4 _ _ _ + + + + _ + + _ + _ _ + + + + 5 _ + _ + _ + 6. You have four strains of Drosophila (1-4) that were isolated from different geographic regions. You compare the banding patterns of the second chromosome and obtain these results (each letter corresponds to a band): (1) mnrqpostuv (2) mnopqrstuv (3) mnrqtsupov (4) mnrqtsopuv If (3) is presumed to be the ancestral strain, in what order did the other strains arise? 7. Deduce whether each of the nucleic acid molecules in the following table is DNA or RNA and single-stranded or double-stranded. Nucleic Acid Molecule A B C D E F %A %G %T %C %U 33 33 26 21 15 30 17 33 24 40 40 20 33 17 0 21 0 15 17 17 24 18 30 20 0 0 26 0 15 15 8. What is a consensus sequence? a conserved sequence? 9. Define structural and functional alleles. What is the cis part of a cis-trans complementation test? 10. A plasmid was isolated and treated with several restriction enzymes. The fragment lengths were determined for each digest. From the data below, determine the restriction map for this plasmid. Include the restriction sites and fragment lengths in your diagram. EcoRI: 1.7, 0.8 BamHI: 1.3, 1.2 EcoRI+ BamHI: 1.2, 0.7, 0.5, 0.1 EcoRI+ SmaI: 1.4, 0.8, 0.3 BamHI + SmaI: 1.2, 0.9, 0.4